Query gi|254780215|ref|YP_003064628.1| hypothetical protein CLIBASIA_00500 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 262 No_of_seqs 138 out of 3434 Neff 7.2 Searched_HMMs 23785 Date Mon May 23 16:09:09 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780215.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1j6o_A TATD-related deoxyribon 100.0 0 0 528.7 18.3 257 1-259 12-268 (268) 2 1xwy_A DNAse TATD, deoxyribonu 100.0 0 0 512.3 24.6 253 1-255 4-261 (264) 3 1yix_A Deoxyribonuclease YCFH; 100.0 0 0 508.6 20.4 253 1-258 2-257 (265) 4 2xio_A Putative deoxyribonucle 100.0 0 0 504.6 20.2 253 1-257 2-293 (301) 5 2gzx_A Putative TATD related D 100.0 0 0 497.3 23.5 255 1-258 1-256 (265) 6 3e2v_A 3'-5'-exonuclease; stru 100.0 0 0 496.9 20.7 255 2-256 14-394 (401) 7 3ipw_A Hydrolase TATD family p 100.0 0 0 492.9 20.9 251 2-255 28-321 (325) 8 1zzm_A Putative deoxyribonucle 100.0 0 0 490.0 21.4 252 1-255 4-257 (259) 9 3gg7_A Uncharacterized metallo 100.0 0 0 466.6 18.2 243 2-259 3-247 (254) 10 3guw_A Uncharacterized protein 100.0 0 0 362.7 5.2 233 1-260 1-252 (261) 11 2vc7_A Aryldialkylphosphatase; 100.0 8.1E-42 0 297.5 18.6 251 2-255 18-314 (314) 12 1bf6_A Phosphotriesterase homo 100.0 1.9E-41 1.4E-45 295.1 18.0 249 2-254 7-290 (291) 13 3ojg_A Phosphotriesterase; (be 100.0 5.3E-36 2.2E-40 258.8 15.1 251 2-255 23-329 (330) 14 3gtx_A Organophosphorus hydrol 100.0 4.4E-30 1.8E-34 219.5 15.5 252 2-255 33-339 (339) 15 2ob3_A Parathion hydrolase; me 100.0 9.9E-30 4.2E-34 217.1 15.2 255 2-256 17-326 (330) 16 3k2g_A Resiniferatoxin-binding 100.0 4E-27 1.7E-31 199.8 18.5 230 22-256 92-354 (364) 17 3cjp_A Predicted amidohydrolas 99.8 3.2E-17 1.3E-21 133.9 17.7 218 1-255 3-263 (272) 18 3irs_A Uncharacterized protein 99.6 1E-13 4.3E-18 110.6 17.0 210 16-257 47-281 (291) 19 2gwg_A 4-oxalomesaconate hydra 99.5 1.9E-13 7.9E-18 108.8 13.1 228 20-261 53-337 (350) 20 2ffi_A 2-pyrone-4,6-dicarboxyl 99.5 5.5E-12 2.3E-16 99.0 18.1 230 2-255 14-278 (288) 21 2qpx_A Predicted metal-depende 99.5 5.6E-13 2.4E-17 105.6 10.7 147 106-256 205-370 (376) 22 2wm1_A 2-amino-3-carboxymucona 99.4 5.9E-12 2.5E-16 98.8 11.7 219 17-261 55-334 (336) 23 2hbv_A 2-amino-3-carboxymucona 99.3 3.9E-10 1.6E-14 86.7 15.4 209 17-255 59-331 (334) 24 2f6k_A Metal-dependent hydrola 99.2 2.1E-09 8.8E-14 81.9 17.5 229 2-256 3-307 (307) 25 2dvt_A Thermophilic reversible 99.2 1.7E-09 7E-14 82.5 15.0 230 1-255 3-323 (327) 26 3ij6_A Uncharacterized metal-d 99.1 1.6E-10 6.9E-15 89.2 8.7 235 1-255 4-304 (312) 27 2qah_A 2-pyrone-4,6-dicarboxyl 99.0 1E-08 4.2E-13 77.3 13.1 228 2-256 27-292 (303) 28 3ovg_A Amidohydrolase; structu 98.4 3.6E-05 1.5E-09 53.7 16.8 149 106-255 165-329 (363) 29 3nqb_A Adenine deaminase 2; PS 97.5 0.0065 2.7E-07 38.7 14.6 235 2-256 91-336 (608) 30 2vun_A Enamidase; nicotinate d 97.5 0.0063 2.7E-07 38.7 13.6 239 2-256 63-320 (386) 31 2i5g_A Amidohydrolase; NYSGXRC 97.4 0.0089 3.8E-07 37.7 17.6 242 1-257 11-322 (325) 32 1p1m_A Hypothetical protein TM 97.4 0.0069 2.9E-07 38.5 13.1 139 109-256 180-327 (406) 33 2yxo_A Histidinol phosphatase; 96.9 0.03 1.2E-06 34.3 13.0 35 2-36 1-36 (267) 34 1itu_A Renal dipeptidase; glyc 96.2 0.067 2.8E-06 31.9 10.3 141 116-259 184-339 (369) 35 2imr_A Hypothetical protein DR 95.5 0.15 6.4E-06 29.5 11.2 95 151-256 299-397 (420) 36 2z26_A Dihydroorotase, dhoase; 95.2 0.19 8E-06 28.9 14.6 237 3-256 13-305 (347) 37 3b40_A PVDM, probable dipeptid 95.2 0.2 8.2E-06 28.8 17.0 66 190-259 344-409 (417) 38 3ly0_A Dipeptidase AC. metallo 95.0 0.22 9.2E-06 28.5 10.9 138 116-257 198-354 (364) 39 1m65_A Hypothetical protein YC 94.9 0.095 4E-06 30.9 7.2 36 2-37 3-39 (245) 40 2ogj_A Dihydroorotase; TIM bar 94.2 0.16 6.7E-06 29.4 7.0 138 108-256 187-335 (417) 41 3neh_A Renal dipeptidase famil 94.2 0.33 1.4E-05 27.3 9.7 139 115-257 159-311 (318) 42 2wje_A CPS4B, tyrosine-protein 93.5 0.45 1.9E-05 26.4 12.4 85 160-255 150-243 (247) 43 2ics_A Adenine deaminase; TIM 93.0 0.35 1.5E-05 27.1 7.1 128 118-256 177-317 (379) 44 1j5s_A Uronate isomerase; TM00 92.6 0.31 1.3E-05 27.5 6.3 132 110-254 283-461 (463) 45 2pgf_A Adenosine deaminase; me 92.3 0.62 2.6E-05 25.5 7.6 139 94-253 203-355 (371) 46 3id7_A Dipeptidase; streptomyc 91.9 0.71 3E-05 25.1 9.7 140 117-259 178-371 (400) 47 2rag_A Dipeptidase; aminohydro 91.0 0.89 3.7E-05 24.4 9.6 68 188-259 343-410 (417) 48 3ou8_A Adenosine deaminase; st 90.9 0.9 3.8E-05 24.4 13.6 124 111-252 178-313 (326) 49 3lnp_A Amidohydrolase family p 87.8 1.5 6.4E-05 22.9 13.0 22 235-256 363-384 (468) 50 2fty_A Dihydropyrimidinase; al 87.2 1.6 6.9E-05 22.7 7.4 22 235-256 412-433 (559) 51 2w9m_A Polymerase X; SAXS, DNA 86.6 1.8 7.4E-05 22.5 10.8 37 2-38 328-364 (578) 52 3o0f_A Putative metal-dependen 85.6 1.7 7.2E-05 22.6 5.7 54 2-55 14-68 (301) 53 3iac_A Glucuronate isomerase; 85.5 0.44 1.9E-05 26.5 2.7 134 111-255 284-471 (473) 54 1u83_A Phosphosulfolactate syn 85.1 2.1 8.7E-05 22.0 8.2 163 25-208 37-232 (276) 55 1qwg_A PSL synthase;, (2R)-pho 82.3 2.7 0.00011 21.2 9.3 170 25-208 10-208 (251) 56 2isw_A Putative fructose-1,6-b 82.3 2.7 0.00011 21.2 8.1 177 5-194 78-272 (323) 57 2ftw_A Dihydropyrimidine amido 82.0 2.8 0.00012 21.2 11.6 34 223-256 354-387 (521) 58 1rvg_A Fructose-1,6-bisphospha 80.4 3.1 0.00013 20.8 5.5 177 4-194 74-270 (305) 59 3n9r_A Fructose-bisphosphate a 79.2 3.4 0.00014 20.6 9.3 176 5-194 77-272 (307) 60 3l52_A Orotidine 5'-phosphate 79.2 3.4 0.00014 20.6 5.4 119 44-169 13-146 (284) 61 2nxf_A Putative dimetal phosph 78.1 3.7 0.00015 20.4 8.2 92 105-203 202-309 (322) 62 2q01_A Uronate isomerase; stru 76.2 4.1 0.00017 20.0 6.9 135 111-255 291-471 (497) 63 1v93_A 5,10-methylenetetrahydr 76.1 4.1 0.00017 20.0 6.5 116 4-128 73-206 (296) 64 2qul_A D-tagatose 3-epimerase; 75.5 4.3 0.00018 19.9 8.1 158 7-165 6-198 (290) 65 3dc8_A Dihydropyrimidinase; TI 75.2 4.4 0.00018 19.8 5.6 35 222-256 341-375 (490) 66 1dxe_A 2-dehydro-3-deoxy-galac 74.9 3.2 0.00013 20.8 4.1 140 19-182 81-242 (256) 67 2puz_A Imidazolonepropionase; 74.2 4.6 0.00019 19.7 10.0 134 109-256 234-372 (419) 68 1izc_A Macrophomate synthase i 73.2 4.9 0.00021 19.5 12.0 35 19-54 107-142 (339) 69 2gwn_A Dihydroorotase; zinc-bi 70.3 5.7 0.00024 19.1 12.7 34 223-256 341-374 (452) 70 2bb0_A Imidazolonepropionase; 69.9 5.8 0.00024 19.0 12.8 133 110-256 230-367 (421) 71 1o12_A N-acetylglucosamine-6-p 69.8 5.8 0.00024 19.0 12.3 35 222-256 305-339 (376) 72 2anu_A Hypothetical protein TM 69.4 5.3 0.00022 19.3 4.2 37 1-37 20-56 (255) 73 2zvr_A Uncharacterized protein 68.7 6.1 0.00026 18.9 5.7 20 238-257 270-289 (290) 74 2f46_A Hypothetical protein; 7 65.7 3.7 0.00016 20.3 2.8 42 93-134 70-113 (156) 75 1i60_A IOLI protein; beta barr 65.7 7 0.00029 18.5 9.0 214 16-256 14-274 (278) 76 2qee_A BH0493 protein; amidohy 64.3 5.4 0.00023 19.2 3.5 139 106-257 237-417 (437) 77 1onw_A Isoaspartyl dipeptidase 63.7 7.6 0.00032 18.2 16.1 65 192-256 272-342 (390) 78 1gkr_A Hydantoinase, non-ATP d 63.5 4.6 0.00019 19.7 3.0 30 227-256 345-374 (458) 79 1odz_A Mannanase A; hydrolase, 62.3 8 0.00034 18.1 7.4 119 92-211 241-379 (386) 80 1xvl_A Mn transporter, MNTC pr 62.0 8.1 0.00034 18.0 6.5 20 187-206 244-263 (321) 81 3iar_A Adenosine deaminase; pu 61.8 8.2 0.00034 18.0 12.5 123 112-252 194-328 (367) 82 1gvf_A Tagatose-bisphosphate a 60.6 8.6 0.00036 17.9 5.6 57 138-194 191-249 (286) 83 2img_A Dual specificity protei 60.1 8.2 0.00035 18.0 3.8 38 105-142 71-108 (151) 84 2prs_A High-affinity zinc upta 59.8 8.8 0.00037 17.8 5.9 19 23-43 44-62 (284) 85 1ra0_A Cytosine deaminase; alp 59.0 9.1 0.00038 17.7 9.0 27 107-133 196-222 (430) 86 2vm8_A Dihydropyrimidinase-rel 58.8 5.9 0.00025 19.0 2.8 31 226-256 375-405 (501) 87 3d03_A Phosphohydrolase; glyce 58.0 9.5 0.0004 17.6 12.0 122 18-144 28-185 (274) 88 3e74_A Allantoinase; (beta/alp 55.4 10 0.00044 17.3 17.5 33 224-256 362-394 (473) 89 2v5j_A 2,4-dihydroxyhept-2-ENE 55.1 11 0.00044 17.3 10.4 140 19-182 101-263 (287) 90 3ib7_A ICC protein; metallopho 54.8 11 0.00045 17.3 7.1 154 17-182 52-241 (330) 91 3gxh_A Putative phosphatase (D 54.7 4.5 0.00019 19.7 1.7 41 92-134 64-108 (157) 92 2rfg_A Dihydrodipicolinate syn 52.9 11 0.00048 17.1 12.1 147 18-174 23-200 (297) 93 3dx5_A Uncharacterized protein 52.5 12 0.00049 17.0 8.8 126 17-144 16-162 (286) 94 3e38_A Two-domain protein cont 50.3 9.8 0.00041 17.5 2.8 36 1-36 19-54 (343) 95 2uz9_A Guanine deaminase; zinc 48.3 13 0.00056 16.6 16.2 141 109-256 242-404 (476) 96 3fst_A 5,10-methylenetetrahydr 48.2 14 0.00057 16.6 5.7 114 5-128 85-209 (304) 97 2dqw_A Dihydropteroate synthas 48.0 14 0.00057 16.6 6.5 12 228-239 255-266 (294) 98 2o1e_A YCDH; alpha-beta protei 47.4 14 0.00058 16.5 6.0 19 186-204 226-247 (312) 99 3dcp_A Histidinol-phosphatase; 45.8 15 0.00062 16.3 12.5 37 1-37 1-39 (283) 100 2bvy_A MAN26A, beta-1,4-mannan 45.6 15 0.00062 16.3 8.7 104 93-210 242-362 (475) 101 1fpz_A Cyclin-dependent kinase 45.2 13 0.00056 16.6 2.9 31 108-138 118-148 (212) 102 2vr2_A Dihydropyrimidinase; hy 45.0 15 0.00063 16.3 7.1 32 225-256 379-410 (541) 103 2nq5_A 5-methyltetrahydroptero 44.9 15 0.00064 16.2 3.5 27 197-223 310-337 (755) 104 2i5i_A UPF0249 protein EF_3048 44.8 15 0.00064 16.2 6.5 53 14-69 16-69 (263) 105 1gkp_A Hydantoinase; hydrolase 44.3 15 0.00065 16.2 12.8 33 224-256 344-376 (458) 106 2vws_A YFAU, 2-keto-3-deoxy su 42.7 16 0.00068 16.0 10.1 140 19-182 80-242 (267) 107 3mpg_A Dihydroorotase, dhoase; 42.7 16 0.00069 16.0 3.6 35 222-256 329-363 (428) 108 3h4u_A Amidohydrolase; signatu 40.7 17 0.00074 15.8 10.0 145 110-256 240-396 (479) 109 2qt3_A N-isopropylammelide iso 39.1 7.8 0.00033 18.2 0.9 21 236-256 333-353 (403) 110 2h9a_B CO dehydrogenase/acetyl 39.1 18 0.00078 15.7 5.2 32 112-143 162-196 (310) 111 3ekg_A Mandelate racemase/muco 39.0 19 0.00078 15.7 7.9 24 109-132 300-323 (404) 112 2r91_A 2-keto-3-deoxy-(6-phosp 38.8 19 0.00078 15.6 11.9 102 18-130 21-129 (286) 113 2i6j_A Ssoptp, sulfolobus solf 38.1 18 0.00076 15.7 2.6 28 112-139 78-105 (161) 114 2g0w_A LMO2234 protein; putati 38.0 19 0.00081 15.5 8.7 121 17-143 37-173 (296) 115 1vp8_A Hypothetical protein AF 36.3 20 0.00086 15.4 5.8 63 16-81 30-96 (201) 116 2ehh_A DHDPS, dihydrodipicolin 36.2 21 0.00086 15.4 11.0 104 18-131 23-134 (294) 117 2nuw_A 2-keto-3-deoxygluconate 35.8 21 0.00087 15.3 9.9 103 18-131 22-131 (288) 118 1v77_A PH1877P, hypothetical p 35.6 21 0.00088 15.3 5.3 177 44-258 17-211 (212) 119 1ad1_A DHPS, dihydropteroate s 35.6 21 0.00088 15.3 5.7 17 116-132 114-131 (266) 120 3elf_A Fructose-bisphosphate a 35.1 21 0.00089 15.3 6.7 47 150-196 247-295 (349) 121 1srv_A Protein (groel (HSP60 c 34.9 21 0.0009 15.2 3.6 43 110-152 40-82 (145) 122 2rf4_B DNA-directed RNA polyme 34.5 11 0.00047 17.1 1.1 50 119-168 13-68 (87) 123 1gnl_A HCP, hybrid cluster pro 34.3 22 0.00092 15.2 8.7 191 31-241 233-476 (544) 124 2wqp_A Polysialic acid capsule 33.5 23 0.00095 15.1 3.1 48 115-162 140-188 (349) 125 1e9y_B Urease beta subunit; hy 33.5 23 0.00095 15.1 2.8 21 236-256 399-419 (569) 126 3hh8_A Metal ABC transporter s 33.4 23 0.00095 15.1 6.4 20 186-205 222-241 (294) 127 1xxx_A DHDPS, dihydrodipicolin 32.4 24 0.00099 15.0 11.0 116 18-143 37-166 (303) 128 2pge_A MENC; OSBS, NYSGXRC, PS 31.5 24 0.001 14.9 4.8 18 113-130 249-266 (377) 129 4ubp_C Protein (urease (chain 31.4 24 0.001 14.9 2.7 21 236-256 400-420 (570) 130 1rk6_A D-aminoacylase; TIM bar 31.2 12 0.00049 17.0 0.8 22 235-256 407-428 (496) 131 2tps_A Protein (thiamin phosph 30.9 25 0.001 14.8 4.2 71 105-179 60-145 (227) 132 2q5c_A NTRC family transcripti 30.9 25 0.001 14.8 3.3 85 114-205 85-169 (196) 133 3ls9_A Triazine hydrolase; atr 30.9 13 0.00055 16.7 1.0 23 234-256 355-377 (456) 134 3ooq_A Amidohydrolase; structu 30.8 14 0.0006 16.4 1.2 33 223-256 314-346 (396) 135 3h5d_A DHDPS, dihydrodipicolin 30.5 25 0.0011 14.8 10.4 104 18-131 30-142 (311) 136 3fkr_A L-2-keto-3-deoxyarabona 30.2 25 0.0011 14.7 13.9 142 18-169 31-186 (309) 137 2r8c_A Putative amidohydrolase 30.2 16 0.00066 16.1 1.3 22 235-256 344-365 (426) 138 3feq_A Putative amidohydrolase 30.0 15 0.00063 16.3 1.2 24 233-256 339-362 (423) 139 1vm6_A DHPR, dihydrodipicolina 29.9 26 0.0011 14.7 2.9 38 110-147 64-101 (228) 140 1t57_A Conserved protein MTH16 29.8 26 0.0011 14.7 4.2 61 17-81 39-103 (206) 141 2ph5_A Homospermidine synthase 29.6 26 0.0011 14.7 7.4 78 17-97 72-159 (480) 142 2esb_A Dual specificity protei 29.6 22 0.00091 15.2 1.9 30 112-141 86-115 (188) 143 1dos_A Aldolase class II; lyas 29.1 27 0.0011 14.6 7.9 47 150-196 259-307 (358) 144 1ywf_A Phosphotyrosine protein 28.7 25 0.001 14.8 2.1 51 109-161 160-213 (296) 145 2vx5_A Cellvibrio japonicus ma 28.7 27 0.0011 14.6 8.9 18 114-131 299-316 (396) 146 2i9u_A Cytosine/guanine deamin 28.6 13 0.00054 16.7 0.6 24 235-258 352-375 (439) 147 3gip_A N-acyl-D-glutamate deac 28.4 14 0.00059 16.5 0.8 22 235-256 393-414 (480) 148 1ejx_C Urease alpha subunit; a 28.4 27 0.0012 14.5 3.4 21 236-256 397-417 (567) 149 3be7_A Zn-dependent arginine c 28.2 18 0.00075 15.8 1.3 28 228-256 330-357 (408) 150 2yxg_A DHDPS, dihydrodipicolin 28.1 28 0.0012 14.5 11.8 101 17-130 22-133 (289) 151 2ood_A BLR3880 protein; PSI-II 27.6 14 0.00057 16.5 0.6 26 231-256 366-391 (475) 152 2b7k_A SCO1 protein; metalloch 27.0 29 0.0012 14.4 4.2 53 123-177 78-131 (200) 153 2hk0_A D-psicose 3-epimerase; 26.8 29 0.0012 14.4 10.9 129 14-144 34-193 (309) 154 3g8r_A Probable spore coat pol 26.4 30 0.0012 14.3 3.2 64 115-178 127-201 (350) 155 1ohe_A CDC14B, CDC14B2 phospha 26.2 30 0.0013 14.3 3.4 32 110-141 256-287 (348) 156 1su1_A Hypothetical protein YF 26.1 30 0.0013 14.3 3.7 58 4-67 33-101 (208) 157 1t9h_A YLOQ, probable GTPase E 26.0 12 0.0005 16.9 0.1 16 244-259 287-302 (307) 158 3gy1_A Mandelate racemase/muco 25.5 31 0.0013 14.2 4.6 25 109-133 289-313 (408) 159 2paj_A Putative cytosine/guani 24.7 14 0.00059 16.5 0.2 23 234-256 378-400 (492) 160 3d0c_A Dihydrodipicolinate syn 24.5 32 0.0013 14.1 8.9 114 18-142 35-158 (314) 161 3gri_A Dihydroorotase, dhoase; 24.5 32 0.0014 14.1 17.3 32 225-256 331-362 (424) 162 3c2q_A Uncharacterized conserv 24.2 31 0.0013 14.2 1.9 90 79-173 68-164 (345) 163 2ekc_A AQ_1548, tryptophan syn 24.1 33 0.0014 14.0 9.0 24 155-178 154-181 (262) 164 1v8a_A Hydroxyethylthiazole ki 23.9 33 0.0014 14.0 2.1 95 57-169 33-129 (265) 165 1xky_A Dihydrodipicolinate syn 23.8 33 0.0014 14.0 11.8 103 18-130 35-145 (301) 166 3b4u_A Dihydrodipicolinate syn 23.6 33 0.0014 14.0 11.7 107 18-130 26-140 (294) 167 3cm3_A Late protein H1, dual s 23.5 34 0.0014 13.9 2.1 25 114-138 99-123 (176) 168 3inp_A D-ribulose-phosphate 3- 23.4 34 0.0014 13.9 4.6 79 125-206 112-202 (246) 169 1eg7_A Formyltetrahydrofolate 23.1 34 0.0014 13.9 2.3 49 108-157 359-411 (557) 170 1kid_A Groel (HSP60 class); ch 23.1 34 0.0014 13.9 3.2 42 111-152 59-100 (203) 171 2vvt_A Glutamate racemase; iso 23.0 34 0.0014 13.9 7.9 32 22-54 79-110 (290) 172 1o0y_A Deoxyribose-phosphate a 22.8 35 0.0015 13.9 4.9 30 36-68 54-83 (260) 173 3fxg_A Rhamnonate dehydratase; 22.6 35 0.0015 13.8 6.4 25 109-133 305-329 (455) 174 2qs8_A XAA-Pro dipeptidase; am 22.4 35 0.0015 13.8 12.8 130 109-256 215-368 (418) 175 1w3i_A EDA, 2-keto-3-deoxy glu 22.1 36 0.0015 13.8 11.0 104 18-132 22-132 (293) 176 2vhl_A N-acetylglucosamine-6-p 22.1 36 0.0015 13.8 10.8 34 223-256 320-353 (396) 177 1pq4_A Periplasmic binding pro 21.9 36 0.0015 13.7 6.2 20 187-206 228-247 (291) 178 3ijd_A Uncharacterized protein 21.9 36 0.0015 13.7 1.9 18 20-37 38-55 (315) 179 1vhx_A Putative holliday junct 21.7 36 0.0015 13.7 5.1 66 75-143 43-111 (150) 180 1xri_A AT1G05000; structural g 20.9 38 0.0016 13.6 3.5 20 117-136 86-105 (151) 181 2rcn_A Probable GTPase ENGC; Y 20.9 38 0.0016 13.6 3.6 17 242-258 329-345 (358) 182 2q02_A Putative cytoplasmic pr 20.7 38 0.0016 13.6 9.2 133 16-157 19-175 (272) 183 2k4m_A TR8_protein, UPF0146 pr 20.7 38 0.0016 13.6 2.7 102 15-135 22-126 (153) 184 3nme_A Ptpkis1 protein, SEX4 g 20.6 37 0.0015 13.7 1.7 17 23-39 33-49 (294) 185 2z00_A Dihydroorotase; zinc bi 20.6 38 0.0016 13.6 16.9 33 224-256 333-365 (426) 186 1yny_A D-hydantoinase, dhpase; 20.4 39 0.0016 13.5 16.1 33 224-256 346-378 (461) 187 3cx3_A Lipoprotein; zinc-bindi 20.3 39 0.0016 13.5 5.7 48 159-206 185-236 (284) 188 3noe_A DAP-A, dihydrodipicolin 20.3 39 0.0016 13.5 12.8 104 18-131 24-135 (292) No 1 >1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12 Probab=100.00 E-value=0 Score=528.69 Aligned_cols=257 Identities=35% Similarity=0.568 Sum_probs=246.2 Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 91686138887565226899999999869989999167987789999999855723321124454433446788998853 Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELV 80 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~ 80 (262) ||||+||||+...|++|+++++++|.++||.+++++|+++++|.+++++++++| .+++|+|+|||++.+..+++++.+. T Consensus 12 ~lIDtH~HL~~~~~~~d~~~vl~~a~~~gv~~ii~~~~~~~~~~~~~~l~~~~~-~v~~a~GiHP~~~~~~~~~~~~~l~ 90 (268) T 1j6o_A 12 HMVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGVNLEDSKKSLDLSKTSD-RIFCSVGVHPHDAKEVPEDFIEHLE 90 (268) T ss_dssp CEEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEECSSHHHHHHHHHHHTTCT-TEEEEECCCGGGGGGCCTTHHHHHH T ss_pred CEEEECCCCCCHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCCCCCCCCCHHHHHHHH T ss_conf 779853478972446599999999998899889990599999999999984589-6688746898863657677899999 Q ss_pred HHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCC Q ss_conf 10013332100446775533221110246789999876642044203300023335799985310003675331121464 Q gi|254780215|r 81 CLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSS 160 (262) Q Consensus 81 ~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~ 160 (262) .++..++++|||||||||+++.++.+.|+++|++||++|+++++||+||||+|+++++++|+++.. ...++|+|||+|+ T Consensus 91 ~~~~~~~~vaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~~~~~Pv~iH~r~a~~~~~~il~~~~~-~~~~~i~H~fsG~ 169 (268) T 1j6o_A 91 KFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIRDAYSEAYEILRTESL-PEKRGVIHAFSSD 169 (268) T ss_dssp HHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHSCC-CSSCEEETTCCSC T ss_pred HHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCC-CCCCEEEEECCCC T ss_conf 987308789983466664545237899999999999999861998799710068999999998258-7667589854898 Q ss_pred HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH Q ss_conf 02344321035202023322113332233332105667179830786678777688758824499999999987289989 Q gi|254780215|r 161 QKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYE 240 (262) Q Consensus 161 ~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~e 240 (262) .+++++++++||||||||.+|++++++++++++.+|+||||+||||||++|.|+||++|+|++|+.|++.+|+++|++.+ T Consensus 170 ~e~~~~~l~~G~y~s~~g~~~~~~~~~~~~~v~~iPldrlLlETDaP~l~p~~~~g~~n~P~~l~~v~~~iA~i~~~~~e 249 (268) T 1j6o_A 170 YEWAKKFIDLGFLLGIGGPVTYPKNEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQVLGVPEA 249 (268) T ss_dssp HHHHHHHHHHTEEEEECGGGGCTTCHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHHHHHHHTSCHH T ss_pred HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH T ss_conf 99999999789959855764400089999999847865068745898777655578879759999999999988498999 Q ss_pred HHHHHHHHHHHHHHHHHHH Q ss_conf 9999999999998425687 Q gi|254780215|r 241 DLMEETTKNALKLFSKISE 259 (262) Q Consensus 241 ei~~~~~~N~~~~f~~~~~ 259 (262) ++++++++|+++||+++++ T Consensus 250 ~v~~~~~~N~~~lF~~~k~ 268 (268) T 1j6o_A 250 KVDEATTENARRIFLEVKE 268 (268) T ss_dssp HHHHHHHHHHHHHHHSCCC T ss_pred HHHHHHHHHHHHHHHHHCC T ss_conf 9999999999999998429 No 2 >1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12 Probab=100.00 E-value=0 Score=512.33 Aligned_cols=253 Identities=29% Similarity=0.469 Sum_probs=240.3 Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 91686138887565226899999999869989999167987789999999855723321124454433446788998853 Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELV 80 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~ 80 (262) .|||+||||++..|++|+++++++|.++||.+++++|+++++|.++++++++|| .+++|+|+|||++.+..+...+.+. T Consensus 4 ~~iD~H~HL~~~~~~~d~~~vl~~a~~~gV~~ii~~~~~~~~~~~~~~la~~~~-~i~~~~GiHP~~~~~~~~~~~~~~~ 82 (264) T 1xwy_A 4 RMFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYS-SCWSTAGVHPHDSSQWQAATEEAII 82 (264) T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHST-TEEEEECCCGGGGGGCCHHHHHHHH T ss_pred CEEEEEECCCCHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEECCCHHHCCCHHHHHHHH T ss_conf 469985578985770689999999998899889995389999999999997589-8589961181523204655799999 Q ss_pred HHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCC Q ss_conf 10013332100446775533221110246789999876642044203300023335799985310003675331121464 Q gi|254780215|r 81 CLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSS 160 (262) Q Consensus 81 ~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~ 160 (262) .++..++++|||||||||+++..+.+.|+++|++||++|++++|||+||||+|+++++++|+++... ..++++|||+|+ T Consensus 83 ~~~~~~~~~aIGEiGLD~~~~~~~~~~q~~~f~~ql~lA~~~~~PvviH~r~a~~~~~~il~~~~~~-~~~~v~H~f~G~ 161 (264) T 1xwy_A 83 ELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDK-LPGAVLHCFTGT 161 (264) T ss_dssp HHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHGGGGGG-SSCEEECSCCCC T ss_pred HHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC-CCCEEEEEEECC T ss_conf 9970887248862155501134417799999999999985179977998645478999999997436-887789972289 Q ss_pred HHHHHHHHCCCCEEECCCCCCHH-HHHHHHHHHHCCCCCCEEEEECCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHH Q ss_conf 02344321035202023322113-3322333321056671798307866787776----887588244999999999872 Q gi|254780215|r 161 QKLADICLELGGYISFTGMITFP-KYDALRAIARGIPMDRVLVETDSPYIVPVSC----QGKRNEPAYVVNTAKALAKEK 235 (262) Q Consensus 161 ~~~~~~~l~~g~y~S~~g~i~~~-~~~~~~e~v~~iPldriLlETDsP~l~p~~~----r~~~n~P~~i~~~~~~iA~i~ 235 (262) .+++++++++|+||||+|.+++. ++.++|++++.+|+||||+||||||++|.++ ||++|+|++|+.|++++|++| T Consensus 162 ~e~~~~~~~~g~~is~~g~~~~~~~~~~l~~~~~~iPldrlLlETD~P~~~p~~~~~~~~~~rN~P~~l~~v~~~iA~l~ 241 (264) T 1xwy_A 162 REEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWR 241 (264) T ss_dssp HHHHHHHHHTTCEEEECGGGGCTTTSHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHHHHHH T ss_pred HHHHHHHHHCCCEEEECCEEEECCCHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 99987765026648863434104244999999984898783454578866865445444788798799999999999884 Q ss_pred CCCHHHHHHHHHHHHHHHHH Q ss_conf 89989999999999999842 Q gi|254780215|r 236 DVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 236 ~~~~eei~~~~~~N~~~~f~ 255 (262) |++++++++++++|++++|| T Consensus 242 ~~~~e~l~~~~~~N~~~lF~ 261 (264) T 1xwy_A 242 GEDAAWLAATTDANVKTLFG 261 (264) T ss_dssp TCCHHHHHHHHHHHHHHHHC T ss_pred CCCHHHHHHHHHHHHHHHHC T ss_conf 98999999999999999848 No 3 >1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX research center for structural genomics, NYSGXRC, structural genomics, PSI; 1.90A {Escherichia coli K12} SCOP: c.1.9.12 Probab=100.00 E-value=0 Score=508.59 Aligned_cols=253 Identities=39% Similarity=0.620 Sum_probs=236.4 Q ss_pred CEEEEECCCCCH---HHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH Q ss_conf 916861388875---65226899999999869989999167987789999999855723321124454433446788998 Q gi|254780215|r 1 MLIDTHCHLLLP---DFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVD 77 (262) Q Consensus 1 M~iD~H~HL~~~---~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~ 77 (262) ||||+||||+.. .+.+|+++++++|..+||.+++++|+++++|.++.+++++|| .+++++|+|||++....+ ++ T Consensus 2 ~liDtH~Hl~~~~~e~~~~d~~~vi~~a~~~gv~~ii~~~~~~~~~~~~~~l~~~~~-~i~~~~GiHP~~~~~~~~--~e 78 (265) T 1yix_A 2 FLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPSYLHMRDLVGERD-NVVFSCGVHPLNQNDPYD--VE 78 (265) T ss_dssp CEEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCSSHHHHHHHHHHHCSCT-TEEEEECCCTTCCSSCCC--HH T ss_pred EEEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC-CEEEEEECCCCCCCCHHH--HH T ss_conf 699860258863343012389999999998599899994289999999999997489-848997478632178778--99 Q ss_pred HHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEEC Q ss_conf 85310013332100446775533221110246789999876642044203300023335799985310003675331121 Q gi|254780215|r 78 ELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCF 157 (262) Q Consensus 78 ~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~F 157 (262) .+.+++.+++++|||||||||+++..+.+.|+++|++||++|+++++||+||||+|+++++++++++.. ...++|+||| T Consensus 79 ~l~~l~~~~~~vaiGEiGLD~~~~~~~~~~Q~~~f~~ql~lA~~~~~Pv~iH~r~a~~~~~~il~~~~~-~~~~~i~H~f 157 (265) T 1yix_A 79 DLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKV-TDCGGVLHCF 157 (265) T ss_dssp HHHHHHTSTTEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHTTG-GGTCEEETTC T ss_pred HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCEEEEEE T ss_conf 999974257715765305886644331688999999999999874998411331158999999998347-8865389840 Q ss_pred CCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC Q ss_conf 46402344321035202023322113332233332105667179830786678777688758824499999999987289 Q gi|254780215|r 158 SSSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDV 237 (262) Q Consensus 158 sG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~ 237 (262) ||+.+++++++++||||||||.+++++++++|++++.+|+||||+||||||++|.|+||++|+|++++.|++++|++||+ T Consensus 158 sG~~~~a~~~l~~g~~isi~g~~~~~~~~~~~~~v~~iPldrlLlETD~P~~~p~~~rg~~n~P~~l~~v~~~iA~l~~~ 237 (265) T 1yix_A 158 TEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGV 237 (265) T ss_dssp CSCHHHHHHHHTTTCEEEECGGGGSTTCHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHHHHHTS T ss_pred CCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC T ss_conf 69999999999869879125544413479999999850434457613786567655589888569999999999988498 Q ss_pred CHHHHHHHHHHHHHHHHHHHH Q ss_conf 989999999999999842568 Q gi|254780215|r 238 SYEDLMEETTKNALKLFSKIS 258 (262) Q Consensus 238 ~~eei~~~~~~N~~~~f~~~~ 258 (262) +.+++++++++|+++||| ++ T Consensus 238 ~~eel~~~~~~N~~~lf~-i~ 257 (265) T 1yix_A 238 AVEELAQVTTDNFARLFH-ID 257 (265) T ss_dssp CHHHHHHHHHHHHHHHTT-CC T ss_pred CHHHHHHHHHHHHHHHHC-CC T ss_conf 999999999999999959-99 No 4 >2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens} Probab=100.00 E-value=0 Score=504.65 Aligned_cols=253 Identities=28% Similarity=0.417 Sum_probs=228.0 Q ss_pred CEEEEECCCCCHHH----------HCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC Q ss_conf 91686138887565----------22689999999986998999916798778999999985572332112445443344 Q gi|254780215|r 1 MLIDTHCHLLLPDF----------DEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHE 70 (262) Q Consensus 1 M~iD~H~HL~~~~~----------~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~ 70 (262) .+||+||||+++.| ++|++++++||+++||.+++++|+++++|.++++++++|| .+++++|+|||++.+ T Consensus 2 ~~iD~h~hL~~~~f~~~~~~~~~~~~D~~~Vi~rA~~~GV~~ii~~g~~~~~~~~~~~la~~~~-~i~~~~GiHP~~~~~ 80 (301) T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQTNG-MFFSTVGCHPTRCGE 80 (301) T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCCSHHHHHHHHHHHTTCT-TEEEEECCCGGGTHH T ss_pred EEEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC-CEEEEECCCCCHHHC T ss_conf 1598747889857658545655770379999999998499889996489999999999984298-746881748405404 Q ss_pred CC----HHHHHHHHHHC--CCCCCCEECCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHH Q ss_conf 67----88998853100--13332100446775533-2211102467899998766420442033000233357999853 Q gi|254780215|r 71 EN----EVLVDELVCLA--SHPRVVAIGETGLDRYH-NAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQE 143 (262) Q Consensus 71 ~~----~~~~~~l~~l~--~~~~~~aIGEiGLD~~~-~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~ 143 (262) .. +..++++..+. ..++++|||||||||++ +.++++.|+++|++||+||++++|||+||||+|+++++++|++ T Consensus 81 ~~~~~~~~~~~~l~~l~~~~~~~~vAIGEiGLDy~~~~~~~~~~Q~~vF~~ql~lA~~~~lPvviH~r~a~~~~~~il~~ 160 (301) T 2xio_A 81 FEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDITKR 160 (301) T ss_dssp HHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEESCHHHHHHHHHH T ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH T ss_conf 66556778999999997436677679987552566456998999999999999999984887479827976999999998 Q ss_pred HHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC------ Q ss_conf 10003675331121464023443210352020233221133322333321056671798307866787776887------ Q gi|254780215|r 144 EMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGK------ 217 (262) Q Consensus 144 ~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~------ 217 (262) +.. .+.++|+|||||+.+++++++++||||||||.+++++ +.+++++.+|+||||+|||||||+|.|+||+ T Consensus 161 ~~~-~~~~~v~H~FsG~~e~a~~~l~lG~y~s~~g~i~~~~--~~~e~v~~iPldrlLlETDsPyl~p~~~~~~~~~~~~ 237 (301) T 2xio_A 161 NRD-RCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKTE--ANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRT 237 (301) T ss_dssp TGG-GSSCEEETTCCCCHHHHHHHHHTTCEEEECGGGSSSH--HHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCC T ss_pred HHC-CCCCCEEEECCCCHHHHHHHHHCCCEEEECCEECCCH--HHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCC T ss_conf 524-5767347854799999999852697899677343506--7788886098577698325865676533344211234 Q ss_pred ----------------CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH Q ss_conf ----------------5882449999999998728998999999999999984256 Q gi|254780215|r 218 ----------------RNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKI 257 (262) Q Consensus 218 ----------------~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~ 257 (262) +|+|++|+.|++++|++++++.+++++++++|++|||... T Consensus 238 ~~p~~~k~~~~~~~~~rNeP~~l~~v~~~iAei~~~~~eeva~~~~~N~~rlF~~~ 293 (301) T 2xio_A 238 AFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVFFPV 293 (301) T ss_dssp CCCEESSCCTTSEETTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHCCC T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC T ss_conf 55431101223356778870899999999998879299999999999999983831 No 5 >2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural genomics, PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp} Probab=100.00 E-value=0 Score=497.26 Aligned_cols=255 Identities=38% Similarity=0.598 Sum_probs=243.4 Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 91686138887565226899999999869989999167987789999999855723321124454433446788998853 Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELV 80 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~ 80 (262) ||||+||||++..|++|+++++++|+++||.+++++|+++++|.++++++++|| .+++++|+|||++..+.+...+.+. T Consensus 1 MlID~H~HL~~~~~~~d~~~vi~~a~~~gv~~ii~~~~~~~~~~~~~~l~~~~~-~i~~~~G~HP~~~~~~~~~~~~~~~ 79 (265) T 2gzx_A 1 MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFNKSTIERAMKLIDEYD-FLYGIIGWHPVDAIDFTEEHLEWIE 79 (265) T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHH T ss_pred CEEEECCCCCCHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC-CEEEECCCCCCCCCCCCHHHHHHHH T ss_conf 949866698973547599999999998799889992589999999999996588-6788438887514453244578999 Q ss_pred HHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCC Q ss_conf 10013332100446775533221110246789999876642044203300023335799985310003675331121464 Q gi|254780215|r 81 CLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSS 160 (262) Q Consensus 81 ~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~ 160 (262) .+...++++|||||||||++...+.+.|+++|++||++|.++++||+||||+|+++++++|+++... ..++|+|||+|+ T Consensus 80 ~~~~~~~~~aiGEiGLD~~~~~~~~~~Q~~~f~~ql~lA~e~~lPv~iH~r~a~~~~~~il~~~~~~-~~~~v~H~fsg~ 158 (265) T 2gzx_A 80 SLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEEHAE-EVGGIMHSFSGS 158 (265) T ss_dssp HHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHTTGG-GTCEEETTCCSC T ss_pred HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCC-CCEEEEEECCCC T ss_conf 9982887246513564433267749899999999999999869928999754307799999971577-870899835899 Q ss_pred HHHHHHHHCC-CCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH Q ss_conf 0234432103-520202332211333223333210566717983078667877768875882449999999998728998 Q gi|254780215|r 161 QKLADICLEL-GGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSY 239 (262) Q Consensus 161 ~~~~~~~l~~-g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~ 239 (262) .+++++++++ |+|+||+|.+++++++++|++++.+|+||||+||||||++|.|+||++|+|++++.|++++|++||+++ T Consensus 159 ~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~~~~iPldrlLlETD~P~~~p~~~~~~~n~P~~l~~~~~~lA~i~~~~~ 238 (265) T 2gzx_A 159 PEIADIVTNKLNFYISLGGPVTFKNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAELKGLSY 238 (265) T ss_dssp HHHHHHHHHTSCCEEEECGGGGCSSCCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHHHHHHHHTTCCH T ss_pred HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH T ss_conf 99999999968996884576554132799999973880544750478655765557877974899999999998859899 Q ss_pred HHHHHHHHHHHHHHHHHHH Q ss_conf 9999999999999842568 Q gi|254780215|r 240 EDLMEETTKNALKLFSKIS 258 (262) Q Consensus 240 eei~~~~~~N~~~~f~~~~ 258 (262) +++++++++|++++|| ++ T Consensus 239 ~el~~~~~~N~~~lf~-l~ 256 (265) T 2gzx_A 239 EEVCEQTTKNAEKLFN-LN 256 (265) T ss_dssp HHHHHHHHHHHHHHHC--- T ss_pred HHHHHHHHHHHHHHCC-CC T ss_conf 9999999999999829-99 No 6 >3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.50A {Saccharomyces cerevisiae YJM789} Probab=100.00 E-value=0 Score=496.94 Aligned_cols=255 Identities=27% Similarity=0.382 Sum_probs=227.5 Q ss_pred EEEEECCCCCHHH----------HCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCC----CCCCCCCCCCCC Q ss_conf 1686138887565----------22689999999986998999916798778999999985572----332112445443 Q gi|254780215|r 2 LIDTHCHLLLPDF----------DEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPS----SIFCSVGTHPCH 67 (262) Q Consensus 2 ~iD~H~HL~~~~~----------~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~----~i~~a~GiHP~~ 67 (262) +||+||||.+..| +.|++++|+||+++||.+++++|+++++|.++++|+++|++ +||+++|||||+ T Consensus 14 ~iD~~~~L~d~~F~~~y~~~~~hd~Dl~~Vl~rA~~~GV~~ii~~g~~~~~~~~a~~La~~~~~~~p~~i~~avGiHP~~ 93 (401) T 3e2v_A 14 YYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIAESQSAIELVSSVKDLSPLKLYHTIGVHPCC 93 (401) T ss_dssp EEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHTTTCSSEEEEEECCCGGG T ss_pred EEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCH T ss_conf 38973478995766844676677137999999999879998999159999999999999966235776089998518141 Q ss_pred CCCCCHHH------------------------------------HHHHHHH------CCCCCCCEECCCCCCCCC-CCCC Q ss_conf 34467889------------------------------------9885310------013332100446775533-2211 Q gi|254780215|r 68 AHEENEVL------------------------------------VDELVCL------ASHPRVVAIGETGLDRYH-NAHT 104 (262) Q Consensus 68 ~~~~~~~~------------------------------------~~~l~~l------~~~~~~~aIGEiGLD~~~-~~~~ 104 (262) +.+..+.. ++.+..+ ...++++|||||||||++ +..+ T Consensus 94 a~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~l~~l~~~~~~~~~~~~~~vvAIGEiGLDy~~~~~~~ 173 (401) T 3e2v_A 94 VNEFADASQGDKASASIDNPSMDEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSS 173 (401) T ss_dssp GGGGC------------------CHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHCSTTCSEEEEEEEEEETTCTTTSC T ss_pred HCCCCCHHHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC T ss_conf 00156101000011101233322100133432201452013678999999999987733898799998036889778998 Q ss_pred CHHHHHHHHHHHHHH----HHCCCCCEEECHHHHHHHHHHHHHHHHC-------------------------CCCCCCCE Q ss_conf 102467899998766----4204420330002333579998531000-------------------------36753311 Q gi|254780215|r 105 IEEQKVVFLRHIEAS----RITGIPLVIHSRSADDDMAAILQEEMKK-------------------------GPFPFVIH 155 (262) Q Consensus 105 ~e~Q~~vF~~ql~lA----~e~~~pv~iH~r~a~~~~l~iL~~~~~~-------------------------~~~~~i~H 155 (262) ++.|+++|++||+|| +++++||+||||+|+++++++|+++... .+.++|+| T Consensus 174 ~e~Q~~~F~~QL~lA~~~~k~~~lPv~iH~R~A~~~~~~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~H 253 (401) T 3e2v_A 174 KEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSACDDFVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRKLVVH 253 (401) T ss_dssp HHHHHHHHHHHHHHTTSSHHHHTSCEEEEEESCHHHHHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCTTCCEEEC T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEE T ss_conf 99999999999999998515308853999644269999999986014443221000000121112221123677656998 Q ss_pred ECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC------------------ Q ss_conf 21464023443210352020233221133322333321056671798307866787776887------------------ Q gi|254780215|r 156 CFSSSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGK------------------ 217 (262) Q Consensus 156 ~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~------------------ 217 (262) ||||+.+++++++++|+|||||+.+++.++.+++++++.+|+||||+|||||||+|.|.++. T Consensus 254 ~FsG~~~~a~~~l~lg~~~~~s~~~~~~~~~~~~~~vk~iPldrlLlETDaPyl~p~p~~~~~~~~~~~~~~~~~~~~~~ 333 (401) T 3e2v_A 254 SFTGSAIDLQKLLNLSPNIFIGVNGCSLRTEENLAVVKQIPTERLLLETDAPWCEIKRTHASFQYLAKYQEVRDFEYPAF 333 (401) T ss_dssp SCCCCHHHHHHHHHHCTTEEEEECGGGGSSHHHHHHHHTSCGGGEEECCCTTSCCCCTTSTTHHHHHHHHHHSCCCSSSS T ss_pred ECCCCHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 05796788777750587499987665434567999998699467798257887677676676433233333222344442 Q ss_pred ----------------------CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf ----------------------588244999999999872899899999999999998425 Q gi|254780215|r 218 ----------------------RNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 218 ----------------------~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) +|+|++|+.|++.||++|+++++++++++++|+++|||. T Consensus 334 ~~~k~~k~~~~~~~~~~~~~k~RNEP~~i~~v~~~iA~lk~~~~eeva~~~~~N~~~lFgl 394 (401) T 3e2v_A 334 KSVKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKDVDLATLIDTTWKTTCKIFGE 394 (401) T ss_dssp EEECGGGSGGGTTSSSCEEETTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHC- T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC T ss_conf 2112111233333221134677887657999999999762999999999999999999579 No 7 >3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infectious disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1} Probab=100.00 E-value=0 Score=492.93 Aligned_cols=251 Identities=25% Similarity=0.383 Sum_probs=228.6 Q ss_pred EEEEECCCCCHHH----------HCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCC----CCCCCCCCCCCC Q ss_conf 1686138887565----------22689999999986998999916798778999999985572----332112445443 Q gi|254780215|r 2 LIDTHCHLLLPDF----------DEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPS----SIFCSVGTHPCH 67 (262) Q Consensus 2 ~iD~H~HL~~~~~----------~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~----~i~~a~GiHP~~ 67 (262) +||+||||++..| ++|++++++||+++||.+++++|+++++|.++++|+++||+ .+|+++|+|||+ T Consensus 28 ~iDi~~nlt~~~f~g~y~g~~~h~~Dl~~Vl~rA~~~gV~~ii~~g~~~~~~~~a~~La~~~~~~~~~~i~~t~GiHP~~ 107 (325) T 3ipw_A 28 FIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSGCLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTR 107 (325) T ss_dssp EEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGG T ss_pred EEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC T ss_conf 68998788996767865776477026999999999869998999239999999999999867775566279997158270 Q ss_pred CCCCC-HHHHHHHHHHCC--CCCCCEECCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHC-CCCCEEECHHHHHHHHHHHH Q ss_conf 34467-889988531001--3332100446775533-2211102467899998766420-44203300023335799985 Q gi|254780215|r 68 AHEEN-EVLVDELVCLAS--HPRVVAIGETGLDRYH-NAHTIEEQKVVFLRHIEASRIT-GIPLVIHSRSADDDMAAILQ 142 (262) Q Consensus 68 ~~~~~-~~~~~~l~~l~~--~~~~~aIGEiGLD~~~-~~~~~e~Q~~vF~~ql~lA~e~-~~pv~iH~r~a~~~~l~iL~ 142 (262) +.+.. +.+++++..++. .++++|||||||||+| +.++++.|+++|.+|+.+|.+. ++||+||||+|+++++++|+ T Consensus 108 a~e~~~~~~l~~l~~l~~~~~~~vvAIGEiGLDy~~~~~~~~e~Q~~~f~~ql~la~k~~~lPl~lH~R~A~~d~~~iL~ 187 (325) T 3ipw_A 108 TNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKSWSDLCQLNK 187 (325) T ss_dssp GGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEESCHHHHHHHHH T ss_pred CHHCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHH T ss_conf 00034312899999998744687689986531787566870999999999987889997199703141573577999998 Q ss_pred HHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC--------- Q ss_conf 31000367533112146402344321035202023322113332233332105667179830786678777--------- Q gi|254780215|r 143 EEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVS--------- 213 (262) Q Consensus 143 ~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~--------- 213 (262) ++. ....++|+|||||+.+++++++++||||||+|.++ |+++++++++.+|+||||+||||||++|.| T Consensus 188 ~~~-~~~~~~v~HcFtGs~e~a~~~l~lG~yisi~G~~~--~~~~~~~~vk~iPldrLLlETDaPyl~p~~~~~~~~~~~ 264 (325) T 3ipw_A 188 ELG-YNGCKGVVHCFDGTEEEMNQILNEGWDIGVTGNSL--QSIELLNVMKQIPIERLHIETDCPYCGIKKTSAGFKYLK 264 (325) T ss_dssp HTT-CTTSCEEECSCCCCHHHHHHHHHTTCEEEECSGGG--SSHHHHHHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCS T ss_pred HHC-CCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCC--CHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCHHHCC T ss_conf 731-15776477667899999987632771899942414--216899999859976899824788667766542111113 Q ss_pred ---------------CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf ---------------688758824499999999987289989999999999999842 Q gi|254780215|r 214 ---------------CQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 214 ---------------~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262) ++|++|+|++|+.|+++||++++++++++++++++|+++||. T Consensus 265 ~~~~~~k~~k~~~~~~~~~RNEP~~l~~va~~iA~l~~~~~eela~~~~~N~~rlFf 321 (325) T 3ipw_A 265 EKDFGVKVEKYQRNKYVQRRNEPSNIIDIAIIMSSIKHISLFEFVNKVYSNSMNMYF 321 (325) T ss_dssp SCCCCBCGGGCCTTSCBTTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHS T ss_pred CCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC T ss_conf 343210012211234689888617899999999988795999999999999999858 No 8 >1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12 Probab=100.00 E-value=0 Score=490.02 Aligned_cols=252 Identities=28% Similarity=0.497 Sum_probs=237.4 Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 91686138887565226899999999869989999167987789999999855723321124454433446788998853 Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELV 80 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~ 80 (262) +|||+||||++..+.+|+++++++|.++||.+++++|+++++|.+++++++++| .+++++|+|||++.+..+.+++.+. T Consensus 4 k~iD~H~Hl~~~~~~~d~~~~l~~a~~~~i~~~v~~~~~~~~~~~~~~l~~~~~-~i~~~~GiHP~~~~~~~~~~~~~~~ 82 (259) T 1zzm_A 4 RFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQ 82 (259) T ss_dssp CEEESCBCTTSTTTTTCHHHHHHHHHHTTEEEEEEECCSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHH T ss_pred CEEEEEECCCCHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEECCCHHCCCCHHHHHHHH T ss_conf 779850268971447699999999998499889996499999999999987587-8169996064021134345699988 Q ss_pred HHCC--CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECC Q ss_conf 1001--33321004467755332211102467899998766420442033000233357999853100036753311214 Q gi|254780215|r 81 CLAS--HPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFS 158 (262) Q Consensus 81 ~l~~--~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~Fs 158 (262) .++. .++++||||||||++++.++.+.|+++|++||++|.++|+||+||||+|+++++++++.+ ....++++|||+ T Consensus 83 ~~~~~~~~~~~~iGEiGLD~~~~~~~~~~Q~~~f~~ql~lA~~~~~Pv~iH~r~a~~~~~~~~~~~--~~~~~~i~H~f~ 160 (259) T 1zzm_A 83 QALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRH--DLPRTGVVHGFS 160 (259) T ss_dssp HHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHH--CCTTCEEETTCC T ss_pred HHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH--CCCCCCEEEECC T ss_conf 998618766599853242202566328799999999999999847870452036899999999983--578773787368 Q ss_pred CCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC Q ss_conf 64023443210352020233221133322333321056671798307866787776887588244999999999872899 Q gi|254780215|r 159 SSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVS 238 (262) Q Consensus 159 G~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~ 238 (262) |+.+++++++++|+||||||.++|++++++|++++.+|+||||+||||||++|.++||++|+|++++.|++++|+++|++ T Consensus 161 g~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~v~~ipldriLlETD~P~~~~~~~r~~~n~P~~i~~~~~~lA~i~~~~ 240 (259) T 1zzm_A 161 GSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREP 240 (259) T ss_dssp SCHHHHHHHHHTTCEEEECGGGGCTTTCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHHHHCSSC T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC T ss_conf 99999999997798213365213541188999998636442899568988887667999896699999999999883999 Q ss_pred HHHHHHHHHHHHHHHHH Q ss_conf 89999999999999842 Q gi|254780215|r 239 YEDLMEETTKNALKLFS 255 (262) Q Consensus 239 ~eei~~~~~~N~~~~f~ 255 (262) ++++++++++|+++||| T Consensus 241 ~eev~~~~~~Na~~~f~ 257 (259) T 1zzm_A 241 ADEIAQALLNNTYTLFN 257 (259) T ss_dssp HHHHHHHHHHHHHHHHC T ss_pred HHHHHHHHHHHHHHHCC T ss_conf 99999999999999819 No 9 >3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} Probab=100.00 E-value=0 Score=466.62 Aligned_cols=243 Identities=24% Similarity=0.344 Sum_probs=215.5 Q ss_pred EEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 16861388875652268999999998699899991679877899999998557233211244544334467889988531 Q gi|254780215|r 2 LIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVC 81 (262) Q Consensus 2 ~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~ 81 (262) |||+||||+ +.+|.+. +.++.+.|+..++++|+++.+|.++++++++|| .|++|+|+|||++.+...+ ++.+.. T Consensus 3 liDtH~HLd---~~~d~~~-i~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-~v~~~~GiHP~~~~~~~~~-l~~l~~ 76 (254) T 3gg7_A 3 LIDFHVHLD---LYPDPVA-VARACEERQLTVLSVTTTPAAWRGTLALAAGRP-HVWTALGFHPEVVSERAAD-LPWFDR 76 (254) T ss_dssp CEEEEECGG---GSSSHHH-HHHHHHHTTCEEEECCSSGGGHHHHHGGGTTCT-TEEECBCCCGGGTTTTGGG-THHHHH T ss_pred EEEEEECCC---CCCCHHH-HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEECCCHHHHHHHH-HHHHHH T ss_conf 998301589---9998499-999998199889993289999999999997499-9679985786445453676-999998 Q ss_pred HCCCCCCCEECCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHC-CCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCC Q ss_conf 001333210044677553322-11102467899998766420-4420330002333579998531000367533112146 Q gi|254780215|r 82 LASHPRVVAIGETGLDRYHNA-HTIEEQKVVFLRHIEASRIT-GIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSS 159 (262) Q Consensus 82 l~~~~~~~aIGEiGLD~~~~~-~~~e~Q~~vF~~ql~lA~e~-~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG 159 (262) ++ ++++|||||||||++.. .+.++|+++|++||++|.++ ++||+||||+|+++++++|+++... .++|+||||| T Consensus 77 ~~--~~~~aIGEiGLD~~~~~~~~~~~Q~~~f~~ql~lA~~~~~~pv~iH~r~a~~~~~~iL~~~~~~--~~~v~H~FsG 152 (254) T 3gg7_A 77 YL--PETRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAESEVLNCLEANPRS--GTPILHWYSG 152 (254) T ss_dssp HG--GGCSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHCGGG--EEEEEETCCS T ss_pred HC--CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCC--CCEEEEECCC T ss_conf 67--7871687745668765455599999999999999987207513422155145389999871668--7448884899 Q ss_pred CHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH Q ss_conf 40234432103520202332211333223333210566717983078667877768875882449999999998728998 Q gi|254780215|r 160 SQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSY 239 (262) Q Consensus 160 ~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~ 239 (262) +.+++++++++||||||||.++ ++++.+++++.+|+||||+||||||++ +||++|+|++++.|++++|++++++. T Consensus 153 ~~~~a~~~l~~G~y~S~~~~~~--~~~~~~e~v~~iPldrlLlETDsPyl~---~rg~~n~P~~v~~v~~~iA~l~~~~~ 227 (254) T 3gg7_A 153 SVTELRRAISLGCWFSVGPTMV--RTQKGAALIRSMPRDRVLTETDGPFLE---LDGQAALPWDVKSVVEGLSKIWQIPA 227 (254) T ss_dssp CHHHHHHHHHTTCEEEECHHHH--TSHHHHHHHHHSCGGGEEECCCTTTSE---ETTEECCGGGHHHHHHHHHHHHTSCH T ss_pred CHHHHHHHHHCCEEEEEECHHH--HHHHHHHHHHHCCCCEEEECCCCCCCC---CCCCCCCHHHHHHHHHHHHHHHCCCH T ss_conf 9999999874693999932243--234678999858752599816886545---58998971599999999999979599 Q ss_pred HHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999998425687 Q gi|254780215|r 240 EDLMEETTKNALKLFSKISE 259 (262) Q Consensus 240 eei~~~~~~N~~~~f~~~~~ 259 (262) +++++++++|++||||++++ T Consensus 228 eev~~~~~~N~~rlfG~~~~ 247 (254) T 3gg7_A 228 SEVERIVKENVSRLLGTVRE 247 (254) T ss_dssp HHHHHHHHHHHHHHHHC--- T ss_pred HHHHHHHHHHHHHHHCHHHC T ss_conf 99999999999999573433 No 10 >3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304} Probab=100.00 E-value=0 Score=362.74 Aligned_cols=233 Identities=19% Similarity=0.238 Sum_probs=190.2 Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH--------------HHHHCCCCCCCCCCCCCC Q ss_conf 916861388875652268999999998699899991679877899999--------------998557233211244544 Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIK--------------LCQDYPSSIFCSVGTHPC 66 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~--------------l~~~~p~~i~~a~GiHP~ 66 (262) ||||+||||+...++ + ++++..+||..+++++.++.+...... .+.+++..+|+++|+||+ T Consensus 1 M~~DsH~Hl~~~~~~----d-l~~~~~~Gv~~ii~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~GiHP~ 75 (261) T 3guw_A 1 MYFDSHLHSEGLGFS----E-LVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPR 75 (261) T ss_dssp -CCBCCCCGGGCCHH----H-HHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCCCGG T ss_pred CCEEECCCCCCCCHH----H-HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC T ss_conf 918716189988764----9-99999859988999278800022268999999998888888887448867999988826 Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH-----HHHHHHHHHH Q ss_conf 33446788998853100133321004467755332211102467899998766420442033000-----2333579998 Q gi|254780215|r 67 HAHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR-----SADDDMAAIL 141 (262) Q Consensus 67 ~~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r-----~a~~~~l~iL 141 (262) .+.+.. +.+.+++.+++++|||||||||++ +.|+++|++||++|+++++||+|||| +++++++++| T Consensus 76 ~~~~~~----~~l~~~l~~~~~vaIGEiGLD~~~-----~~Q~~vf~~ql~lA~e~~~Pv~iH~r~~~~~~a~~~~l~il 146 (261) T 3guw_A 76 CIPPDY----EFVLGYLEEGEWVAFGEIGLELVT-----DEEIEVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEIL 146 (261) T ss_dssp GCCTTT----HHHHHHHTTSCCSCEEEEECSSCC-----HHHHHHHHHHHHHHHHHTCCEEEECCSSSTTHHHHHHHHHH T ss_pred CCCHHH----HHHHHHHCCCCEEEEECCCCCCCC-----HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH T ss_conf 485569----999998525986899345378775-----56899999999999854776799842654324799999999 Q ss_pred HHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCH Q ss_conf 53100036753311214640234432103520202332211333223333210566717983078667877768875882 Q gi|254780215|r 142 QEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEP 221 (262) Q Consensus 142 ~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P 221 (262) ++........+++|||+| ++++++++|||+|||+..++.++++++++++.+|+||||+|||+|| .+|+| T Consensus 147 ~~~~~~~~~~~i~H~~~~---~~~~~~~~g~~i~~s~~~~~~~~~~~~~~v~~~p~drlllETD~P~--------~~~~p 215 (261) T 3guw_A 147 ESLDFPADLAVIDHVNFE---TLDMVLETEYWIGLTVQPGKLSAEDAARIVAEHGPERFMLNSDAGY--------RDVEI 215 (261) T ss_dssp HHTTCCTTSEEEESCCTT---THHHHHTSSSEEEEECC-------CCTTGGGGCC-CCEEEECCCCC--------C---- T ss_pred HHHCCCCCCEEEECCCHH---HHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCC--------CCCCH T ss_conf 971887665146037789---9999762164788986157654688999985089450999679999--------98865 Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 449999999998728998999999999999984256875 Q gi|254780215|r 222 AYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKISEC 260 (262) Q Consensus 222 ~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~~~~ 260 (262) .+++.++..+|+ +++.+++.+++++|++||||-.+.+ T Consensus 216 ~~v~~~~~~la~--g~~~e~~~~i~~~Na~rlfgl~~~~ 252 (261) T 3guw_A 216 TTVAEAAVKIEE--AVGREEMEKVARENARKFLRVLEAA 252 (261) T ss_dssp --CCCCTTHHHH--HCTTGGGGHHHHSSHHHHTTC---- T ss_pred HHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHCCCCHH T ss_conf 789999999980--8999999999999999997798034 No 11 >2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A* Probab=100.00 E-value=8.1e-42 Score=297.54 Aligned_cols=251 Identities=12% Similarity=0.100 Sum_probs=193.3 Q ss_pred EEEEECCCC---------CHHHHCCHH------HHHHHHHHCCCCEEEEECCC--HHHHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 168613888---------756522689------99999998699899991679--8778999999985572332112445 Q gi|254780215|r 2 LIDTHCHLL---------LPDFDEDRH------DVIMRAHQANVLKMIAIAIK--VKDFVPLIKLCQDYPSSIFCSVGTH 64 (262) Q Consensus 2 ~iD~H~HL~---------~~~~~~d~~------~~i~~a~~~gv~~~i~~~~~--~~~~~~~~~l~~~~p~~i~~a~GiH 64 (262) ++|+||||. .+.+..+.+ +.+.+++++||..+|.+++. ..+.....+++++++.+++++.|+| T Consensus 18 ~t~~H~HL~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~Gv~~iV~~t~~~~~~~~~~l~~ls~~~g~~i~~~~G~h 97 (314) T 2vc7_A 18 FTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGIY 97 (314) T ss_dssp SEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEBC T ss_pred CCEECCCCCCCCHHHCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEC T ss_conf 73246071568244224774531317889999999999998299889980677641279999999986499678887763 Q ss_pred CCCCC-----CCCHHH-----HHHHHHHCC-CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHH Q ss_conf 44334-----467889-----988531001-3332100446775533221110246789999876642044203300023 Q gi|254780215|r 65 PCHAH-----EENEVL-----VDELVCLAS-HPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSA 133 (262) Q Consensus 65 P~~~~-----~~~~~~-----~~~l~~l~~-~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a 133 (262) |+... +...+. ..++...+. .+..++|||+|+||++. .+.|+++|++|+++|+++++||+||||++ T Consensus 98 ~~~~~p~~~~~~~~~~l~~~~~~ei~~~~~~~~~~~gv~e~gld~~~~---~~~q~~~f~~~~~~A~e~~lPv~iH~r~~ 174 (314) T 2vc7_A 98 IYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPGI---TKDVEKVIRAAAIANKETKVPIITHSNAH 174 (314) T ss_dssp CSSCCCGGGTTCCHHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTCS---CHHHHHHHHHHHHHHHHHCCCEEEECCTT T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC---CHHHHHHHHHHHHHHHHHCCCEEEEECCC T ss_conf 787785101547999999999999999861488751588884358999---87999999999999998699379850664 Q ss_pred HHHHHHHHHHHH---HCCCCCCCCEEC-CCCHHHHHHHHCCCCEEECCCCCCH------HHHHHHHHHHHCCCCCCEEEE Q ss_conf 335799985310---003675331121-4640234432103520202332211------333223333210566717983 Q gi|254780215|r 134 DDDMAAILQEEM---KKGPFPFVIHCF-SSSQKLADICLELGGYISFTGMITF------PKYDALRAIARGIPMDRVLVE 203 (262) Q Consensus 134 ~~~~l~iL~~~~---~~~~~~~i~H~F-sG~~~~~~~~l~~g~y~S~~g~i~~------~~~~~~~e~v~~iPldriLlE 203 (262) .++..+++.... ......++.||| +|+.+++++++++|+|+||++..++ ++++.++++++..|+||||+| T Consensus 175 ~~~~~~~l~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~l~~G~~i~fd~~~~~~~~~~~~~~~~~~~li~~g~~drIlle 254 (314) T 2vc7_A 175 NNTGLEQQRILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGLDLFLPVDKRNETTLRLIKDGYSDKIMIS 254 (314) T ss_dssp TTHHHHHHHHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEECCTTCTTTSCHHHHHHHHHHHHHTTCTTTEEEC T ss_pred CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 14189999999974168776578744998879999999975987986761211348348999999999986494009983 Q ss_pred ECCCCCCCCCCCCCCCCHH--------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 0786678777688758824--------499999999987289989999999999999842 Q gi|254780215|r 204 TDSPYIVPVSCQGKRNEPA--------YVVNTAKALAKEKDVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 204 TDsP~l~p~~~r~~~n~P~--------~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262) ||+||++|.+++++.|.|. ++..++....+.+|++.|++.+++++|+.|||+ T Consensus 255 tD~p~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~Gis~e~i~~i~~~N~~r~fs 314 (314) T 2vc7_A 255 HDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTIPFLKRNGVNEEVIATIFKENPKKFFS 314 (314) T ss_dssp CCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHTC T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC T ss_conf 589756688988865654326887516799999999998699999999999997999839 No 12 >1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3 Probab=100.00 E-value=1.9e-41 Score=295.10 Aligned_cols=249 Identities=17% Similarity=0.162 Sum_probs=195.2 Q ss_pred EEEEECCC--CCHHHHCC-------HH---HHHHHHHHCCCCEEEEECCCH--HHHHHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 16861388--87565226-------89---999999986998999916798--778999999985572332112445443 Q gi|254780215|r 2 LIDTHCHL--LLPDFDED-------RH---DVIMRAHQANVLKMIAIAIKV--KDFVPLIKLCQDYPSSIFCSVGTHPCH 67 (262) Q Consensus 2 ~iD~H~HL--~~~~~~~d-------~~---~~i~~a~~~gv~~~i~~~~~~--~~~~~~~~l~~~~p~~i~~a~GiHP~~ 67 (262) ++|+|||| +...+..+ .+ +.+.+++.+||..++.+++.. .++...++++++++.++++++|+||+. T Consensus 7 ~v~~H~Hl~~d~~~~~~~~~~~~d~~~~~~~~l~~~~~~Gv~~iV~~t~~~~grd~~~~~~la~~~~~~i~~~~G~hp~~ 86 (291) T 1bf6_A 7 YTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDA 86 (291) T ss_dssp EEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCGG T ss_pred CCEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCC T ss_conf 50536382678055351505430007889999999998599889980888662489999999986799878998853775 Q ss_pred CCCC----------CHHHHHHHHHHCCC--CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHH Q ss_conf 3446----------78899885310013--33210044677553322111024678999987664204420330002333 Q gi|254780215|r 68 AHEE----------NEVLVDELVCLASH--PRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADD 135 (262) Q Consensus 68 ~~~~----------~~~~~~~l~~l~~~--~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~ 135 (262) .... .+...+++...+.. .++.+|||+|+||++ ..+.|+++|++|+++|+++++||+|||+.+.. T Consensus 87 ~~~~~~~~~~~~~~~~~~~~ei~~~~~~~~~~~~~ige~g~~~~~---~~~~q~~~f~~~~~~A~~~~lPv~iH~~~~~~ 163 (291) T 1bf6_A 87 FFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGK---ITPLEEKVFIAAALAHNQTGRPISTHTSFSTM 163 (291) T ss_dssp GCCTHHHHSCHHHHHHHHHHHHHTCSTTSSCCEEEEEEEECBTTB---CCHHHHHHHHHHHHHHHHHCCCEEEECGGGCS T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC---CCHHHHHHHHHHHHHHHHHCCCEEEECCCCCC T ss_conf 577656878989999989999998740148610221236555888---97788999999999999969958981376432 Q ss_pred --HHHHHHHHHHHCCCCCCCCE-ECCCCHHHHHHHHCCCCEEECCCCCCHH------HHHHHHHHHHCCCCCCEEEEECC Q ss_conf --57999853100036753311-2146402344321035202023322113------33223333210566717983078 Q gi|254780215|r 136 --DMAAILQEEMKKGPFPFVIH-CFSSSQKLADICLELGGYISFTGMITFP------KYDALRAIARGIPMDRVLVETDS 206 (262) Q Consensus 136 --~~l~iL~~~~~~~~~~~i~H-~FsG~~~~~~~~l~~g~y~S~~g~i~~~------~~~~~~e~v~~iPldriLlETDs 206 (262) +.++++.+........++.| ||+|+.+++++++++|+|+||++..++. +.+.++++++..|+||||+|||+ T Consensus 164 ~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~drill~TD~ 243 (291) T 1bf6_A 164 GLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDI 243 (291) T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCTTCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCC T ss_pred CHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC T ss_conf 12468999997345567247897898989999999865948986105356777177779999999986797159986789 Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 667877768875882449999999998728998999999999999984 Q gi|254780215|r 207 PYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLF 254 (262) Q Consensus 207 P~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f 254 (262) ||+.|.+.+|.+|.|..+..++..+++ +|++.+++.+++++|+.||| T Consensus 244 p~~~~~~~~g~~~~~~~~~~~~~~l~~-~G~s~e~i~~i~~~Np~r~f 290 (291) T 1bf6_A 244 TRRSHLKANGGYGYDYLLTTFIPQLRQ-SGFSQADVDVMLRENPSQFF 290 (291) T ss_dssp CSGGGSGGGTSCCTTHHHHTHHHHHHH-TTCCHHHHHHHHTHHHHHHC T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHH T ss_conf 865645648999940489999999998-49999999999999699970 No 13 >3ojg_A Phosphotriesterase; (beta/alpha)8 barrel, lactonase, hydrolase; HET: KCX HL4; 1.60A {Geobacillus kaustophilus} PDB: 3f4c_A* 3f4d_A* Probab=100.00 E-value=5.3e-36 Score=258.84 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=191.7 Q ss_pred EEEEECCC--CCHHHHCC--------------HHHHHHHHHHCCCCEEEEECCCH--HHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 16861388--87565226--------------89999999986998999916798--77899999998557233211244 Q gi|254780215|r 2 LIDTHCHL--LLPDFDED--------------RHDVIMRAHQANVLKMIAIAIKV--KDFVPLIKLCQDYPSSIFCSVGT 63 (262) Q Consensus 2 ~iD~H~HL--~~~~~~~d--------------~~~~i~~a~~~gv~~~i~~~~~~--~~~~~~~~l~~~~p~~i~~a~Gi 63 (262) ++|+|+|| +.+.+..| ..+.+.+++++|+..+|.++..- .+-....+++++.+-+|+++.|+ T Consensus 23 ~t~~HeHL~~d~~~~~~d~~~~~~~~~~~~~~~~~el~~~~~aGv~~iVd~t~~~~grd~~~l~~ls~~tgv~iv~~tG~ 102 (330) T 3ojg_A 23 KTLIHEHFLFGYPGFQGDVTRGTFREDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEETGLNIICATGY 102 (330) T ss_dssp SEESCCEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECC T ss_pred CCEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEE T ss_conf 81434073258856632556310123546999999999999828987996788655669999999999729976887665 Q ss_pred CCCCCCCCC----------------HHHHHHHHHHCCCCCC-CEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC Q ss_conf 544334467----------------8899885310013332-10044677553322111024678999987664204420 Q gi|254780215|r 64 HPCHAHEEN----------------EVLVDELVCLASHPRV-VAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPL 126 (262) Q Consensus 64 HP~~~~~~~----------------~~~~~~l~~l~~~~~~-~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv 126 (262) ||+...... +....++...+....+ .+|+++|+|++. ..+.|+++|++|+++|++.++|| T Consensus 103 h~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ei~~g~~~t~~kagvi~~~~~~~~---~t~~e~~~f~a~~~~a~~tg~Pv 179 (330) T 3ojg_A 103 YYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGR---ITEYEKMFFRAAARAQKETGAVI 179 (330) T ss_dssp CCTTTSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTTCCCCSEEEEECBTTB---CCHHHHHHHHHHHHHHHHHCCEE T ss_pred EECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC---CCHHHHHHHHHHHHHHHHHCCCE T ss_conf 324334776555555231119999999999998434667765555887256899---99899999999999999829957 Q ss_pred EEECHHHHH--HHHHHHHHHHHCCCCCCCCEE-CCCCHHHHHHHHCCCCEEECCCCCCH---------HHHHHHHHHHHC Q ss_conf 330002333--579998531000367533112-14640234432103520202332211---------333223333210 Q gi|254780215|r 127 VIHSRSADD--DMAAILQEEMKKGPFPFVIHC-FSSSQKLADICLELGGYISFTGMITF---------PKYDALRAIARG 194 (262) Q Consensus 127 ~iH~r~a~~--~~l~iL~~~~~~~~~~~i~H~-FsG~~~~~~~~l~~g~y~S~~g~i~~---------~~~~~~~e~v~~ 194 (262) ++|+|.+.. +.++++.+........+|.|| ++++.+.+++++++|||+||++..++ ++.+.++++++. T Consensus 180 ~iH~~~~~~~~e~~~~l~~~g~d~~~v~i~H~~~~~~~~~~~~~l~~G~~i~~d~~g~~~~~~~~~d~~r~~~i~~lv~~ 259 (330) T 3ojg_A 180 ITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCGNTDPDYHRKTLAYGVYIAFDRFGIQGMVGAPTDEERVRTLLALLRD 259 (330) T ss_dssp EEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCSSTTCCCHHHHHHHHHHHHHT T ss_pred EEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH T ss_conf 99757763317789999973899667699807999989999999974978996665453667799678999999999985 Q ss_pred CCCCCEEEEECC-------CCCCCCCCCCCCCCHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHH Q ss_conf 566717983078-------66787776887588244999999999872--89989999999999999842 Q gi|254780215|r 195 IPMDRVLVETDS-------PYIVPVSCQGKRNEPAYVVNTAKALAKEK--DVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 195 iPldriLlETDs-------P~l~p~~~r~~~n~P~~i~~~~~~iA~i~--~~~~eei~~~~~~N~~~~f~ 255 (262) .|+||||||||+ ||+.|.+.++..|.|.+...+.+.+++++ |++.+++.+.+.+|.+|||. T Consensus 260 g~~drILlstD~~~~~~~~py~~p~~~~~~~~~~~~~~~~~~~ip~L~~~G~~~e~i~~i~~~Np~r~fs 329 (330) T 3ojg_A 260 GYEKQIMLSHNTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPALKNEGIRDEVLEQMFIGNPAALFS 329 (330) T ss_dssp TCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHC T ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC T ss_conf 7853299833566543458877763323457888625689999999998599999999999986999857 No 14 >3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A* Probab=99.97 E-value=4.4e-30 Score=219.48 Aligned_cols=252 Identities=15% Similarity=0.154 Sum_probs=173.8 Q ss_pred EEEEECCC--CCHHHH--------------CCHHHHHHHHHHCCCCEEEEECCC--HHHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 16861388--875652--------------268999999998699899991679--877899999998557233211244 Q gi|254780215|r 2 LIDTHCHL--LLPDFD--------------EDRHDVIMRAHQANVLKMIAIAIK--VKDFVPLIKLCQDYPSSIFCSVGT 63 (262) Q Consensus 2 ~iD~H~HL--~~~~~~--------------~d~~~~i~~a~~~gv~~~i~~~~~--~~~~~~~~~l~~~~p~~i~~a~Gi 63 (262) ++++|-|| +.+.+. ++..+.+.++++.|+..+|.++.. -.+-....+++++.+-+|+.+.|+ T Consensus 33 ~tl~HEHl~~~~~~~~~~~~~~~~d~~~~~~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~tG~ 112 (339) T 3gtx_A 33 ATLPHEHVIFGYPGYAGDVTLGPFDHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATGF 112 (339) T ss_dssp EEEEEEEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEECC T ss_pred CCCCCCCEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEE T ss_conf 85003283317824422256575335678999999999999718987997688876779999999998649718995100 Q ss_pred CCCCCCC-----------CCHHHH-H----HHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE Q ss_conf 5443344-----------678899-8----85310013332100446775533221110246789999876642044203 Q gi|254780215|r 64 HPCHAHE-----------ENEVLV-D----ELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLV 127 (262) Q Consensus 64 HP~~~~~-----------~~~~~~-~----~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~ 127 (262) ||+.... ...+.+ + ++.+-+....+.| |.||....++. .-+.|+++|++|+++|++.++||+ T Consensus 113 y~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ei~~Gi~~t~ika-GvI~~~~~~~~-~t~~E~kvfra~a~aa~etg~PI~ 190 (339) T 3gtx_A 113 YYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRA-GVIKLASSRDA-ITPYEQLFFRAAARVQRETGVPII 190 (339) T ss_dssp CCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCC-SEEEEECCSSC-CCHHHHHHHHHHHHHHHHHCCCEE T ss_pred EECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC-EEEEEECCCCC-CCHHHHHHHHHHHHHHHHHCCCEE T ss_conf 1057677555561343312499999999999986513567672-08998356899-998999999999999998699679 Q ss_pred EECHHHHH--HHHHHHHHHHHCCCCCCCCEECCC-CHHHHHHHHCCCCEEECCCCCC---------HHHHHHHHHHHHCC Q ss_conf 30002333--579998531000367533112146-4023443210352020233221---------13332233332105 Q gi|254780215|r 128 IHSRSADD--DMAAILQEEMKKGPFPFVIHCFSS-SQKLADICLELGGYISFTGMIT---------FPKYDALRAIARGI 195 (262) Q Consensus 128 iH~r~a~~--~~l~iL~~~~~~~~~~~i~H~FsG-~~~~~~~~l~~g~y~S~~g~i~---------~~~~~~~~e~v~~i 195 (262) +||+.+.. +.+++|.+........+|.|||++ +...+++++++|+|+||.+..+ +++...++++++.. T Consensus 191 iHt~~~~~a~e~l~iL~e~g~~~~rvvi~H~d~~~d~~~~~~~l~~G~~l~fD~~g~~~~~~~p~d~~r~~~l~~lv~~g 270 (339) T 3gtx_A 191 THTQEGQQGPQQAELLTSLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAERLSVLTTLLGEG 270 (339) T ss_dssp EECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCSSTTCCCHHHHHHHHHHHHHTT T ss_pred EECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC T ss_conf 73687655789999998769996436998047867899999999769389975565546667984788899999999857 Q ss_pred CCCCEEEEECCCCCCCCCC--CCCCCC-------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 6671798307866787776--887588-------24499999999987289989999999999999842 Q gi|254780215|r 196 PMDRVLVETDSPYIVPVSC--QGKRNE-------PAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 196 PldriLlETDsP~l~p~~~--r~~~n~-------P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262) |.||||+|||+||..|.+. +++.+. |.+|...+....+.+|++.+++.+++.+|..|||| T Consensus 271 ~~drILLstD~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vp~L~~~Gvs~e~I~~i~~~Np~rlFG 339 (339) T 3gtx_A 271 YADRLLLSHDSIWHWLGRPPAIPEAALPAVKDWHPLHISDDILPDLRRRGITEEQVGQMTVGNPARLFG 339 (339) T ss_dssp CGGGEEECCCCEEEESSSCCCCCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHC T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC T ss_conf 964099816888666777676765565334673178899999999998599999999999975797639 No 15 >2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ... Probab=99.97 E-value=9.9e-30 Score=217.11 Aligned_cols=255 Identities=17% Similarity=0.133 Sum_probs=192.2 Q ss_pred EEEEECCCC---------CHHHHCC-------HHHHHHHHHHCCCCEEEEECCCH--HHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 168613888---------7565226-------89999999986998999916798--77899999998557233211244 Q gi|254780215|r 2 LIDTHCHLL---------LPDFDED-------RHDVIMRAHQANVLKMIAIAIKV--KDFVPLIKLCQDYPSSIFCSVGT 63 (262) Q Consensus 2 ~iD~H~HL~---------~~~~~~d-------~~~~i~~a~~~gv~~~i~~~~~~--~~~~~~~~l~~~~p~~i~~a~Gi 63 (262) ++|+||||. .+.+..+ ....+.++...||..++.+++.. .+.....+++++++..++.++|+ T Consensus 17 ~~d~H~Hl~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~a~~~Gv~~iV~~~~~~~~~d~~~l~~~~~~~~~~~~~~~g~ 96 (330) T 2ob3_A 17 FTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGL 96 (330) T ss_dssp SEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEECEEEC T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCC T ss_conf 78560185258644123687666646678999999999999849988999379988789999999998579988997250 Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCC-----CCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHH Q ss_conf 544334467889988531001333210044677553-----322111024678999987664204420330002333579 Q gi|254780215|r 64 HPCHAHEENEVLVDELVCLASHPRVVAIGETGLDRY-----HNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMA 138 (262) Q Consensus 64 HP~~~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~-----~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l 138 (262) ||+..........+.+..........+++++|++.. ......+.|.++|+.|+++|.++++|+.+|+|.+..+.. T Consensus 97 h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~ih~~~~~~~~~ 176 (330) T 2ob3_A 97 WFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGE 176 (330) T ss_dssp CSCCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEECSSSCCHHHHHHHHHHHHHHHHHCCCEEEECCGGGTHHH T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHH T ss_conf 58886444555599999999866775144456664252034666787999999999999999969918996131156789 Q ss_pred HHHHHHH---HCCCCCCCCEECC-CCHHHHHHHHCCCCEEECCCCCCH--------------------HHHHHHHHHHHC Q ss_conf 9985310---0036753311214-640234432103520202332211--------------------333223333210 Q gi|254780215|r 139 AILQEEM---KKGPFPFVIHCFS-SSQKLADICLELGGYISFTGMITF--------------------PKYDALRAIARG 194 (262) Q Consensus 139 ~iL~~~~---~~~~~~~i~H~Fs-G~~~~~~~~l~~g~y~S~~g~i~~--------------------~~~~~~~e~v~~ 194 (262) .++.... ......+++|+|+ ++.+.++++.+.|+|+++.+..++ .+++.++++++. T Consensus 177 ~~~~~~~~~~~~~~~~~i~h~~~~~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (330) T 2ob3_A 177 QQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQ 256 (330) T ss_dssp HHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEECCTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHT T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH T ss_conf 99999863124556426664698746999999986398796556123045300021334665568827768999999983 Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCHH--------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 5667179830786678777688758824--------4999999999872899899999999999998425 Q gi|254780215|r 195 IPMDRVLVETDSPYIVPVSCQGKRNEPA--------YVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 195 iPldriLlETDsP~l~p~~~r~~~n~P~--------~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) .|+|||+++||+|++.|.+.++..+.+. ++..........+|+|.+++.+++.+|..|+|+. T Consensus 257 ~~~dril~~TD~p~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~Gis~e~i~~i~~~Nparl~~l 326 (330) T 2ob3_A 257 GYMKQILVSNDWTFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSP 326 (330) T ss_dssp TCGGGEEECCCCCSEECSSSTTHHHHHHHHCTTGGGHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHSC T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 7888189817899874301267755321157876457999999999984999999999999999999578 No 16 >3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2} Probab=99.96 E-value=4e-27 Score=199.75 Aligned_cols=230 Identities=15% Similarity=0.141 Sum_probs=173.7 Q ss_pred HHHHHHCCCCEEEEECC-CH-HHHHHHHHHHHHCCCCCCCCCCCC-----CCCCCCCCHHHHH-----HHHHHCCCCCCC Q ss_conf 99999869989999167-98-778999999985572332112445-----4433446788998-----853100133321 Q gi|254780215|r 22 IMRAHQANVLKMIAIAI-KV-KDFVPLIKLCQDYPSSIFCSVGTH-----PCHAHEENEVLVD-----ELVCLASHPRVV 89 (262) Q Consensus 22 i~~a~~~gv~~~i~~~~-~~-~~~~~~~~l~~~~p~~i~~a~GiH-----P~~~~~~~~~~~~-----~l~~l~~~~~~~ 89 (262) +.+.+.+|+..+|-++. .. .+-....+++++-.-+|.++.|+| |.++.....+.+. ++.+-+....+. T Consensus 92 l~~fk~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~Iv~~tG~y~~~~~p~~~~~~s~e~la~~~i~ei~~Gi~~t~ik 171 (364) T 3k2g_A 92 VKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLASSMPETAARLSADDIADEIVAEALEGTDGTDAR 171 (364) T ss_dssp HHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGGGCCGGGGTCCHHHHHHHHHHHHHTCBTTBSCC T ss_pred HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCC T ss_conf 99999858986996787666769999999998539759955543457767864521899999999999999764167874 Q ss_pred E--ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH---HHHHHHHHHHHHCCCCCCCCEECCC--CHH Q ss_conf 0--04467755332211102467899998766420442033000233---3579998531000367533112146--402 Q gi|254780215|r 90 A--IGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSAD---DDMAAILQEEMKKGPFPFVIHCFSS--SQK 162 (262) Q Consensus 90 a--IGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~---~~~l~iL~~~~~~~~~~~i~H~FsG--~~~ 162 (262) | |||+|+++.. -+.|+++|++|+++|++.++||++|++.+. .+++++|++........+|.|||++ +.+ T Consensus 172 aG~Igeig~~~~~----t~~E~kv~rA~a~aa~etg~PI~iHt~~~~~~~~e~l~il~~~Gvd~~~vvi~H~d~~~~d~~ 247 (364) T 3k2g_A 172 IGLIGEIGVSSDF----TAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSHMDPV 247 (364) T ss_dssp CSSEEEEECCTTC----CHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGTTCHH T ss_pred EEEEEEECCCCCC----CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH T ss_conf 2589985247889----989999999999999996896573066654208999999998199942258984789999999 Q ss_pred HHHHHHCCCCEEECCCC--------------CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 34432103520202332--------------2113332233332105667179830786678777688758824499999 Q gi|254780215|r 163 LADICLELGGYISFTGM--------------ITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTA 228 (262) Q Consensus 163 ~~~~~l~~g~y~S~~g~--------------i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~ 228 (262) +++++++.|||+||.+. ..+++.+.++++++..++||||++||+|+..|.+.+|..+.+..+..++ T Consensus 248 ~~~~ll~~G~~l~fD~~G~~~~~~~~~~~~p~d~~r~~~i~~lv~~G~~drILlstD~~~~~~~~~~Gg~g~~~i~~~~i 327 (364) T 3k2g_A 248 YQATLAQRGAFLEFDMIGMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVFVKMMLTRYGGNGYAFVTKHFL 327 (364) T ss_dssp HHHHHHHHTCEEEECCTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTSHHHHHHH T ss_pred HHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHH T ss_conf 99999976939998415643346653445663678999999999857877599878888555567589998166999999 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 9999872899899999999999998425 Q gi|254780215|r 229 KALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 229 ~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ..+.+ +|++.+++.+.+.+|..|||+. T Consensus 328 p~L~~-~Gvs~e~I~~i~~~NP~R~f~~ 354 (364) T 3k2g_A 328 PRLRR-HGLDDAALETLMVTNPRRVFDA 354 (364) T ss_dssp HHHHH-TTCCHHHHHHHHTHHHHHHHCT T ss_pred HHHHH-CCCCHHHHHHHHHHHHHHHHCC T ss_conf 99998-6999999999999859999567 No 17 >3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} Probab=99.78 E-value=3.2e-17 Score=133.91 Aligned_cols=218 Identities=17% Similarity=0.137 Sum_probs=140.3 Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCH----------------------------------HHHHHH Q ss_conf 9168613888756522689999999986998999916798----------------------------------778999 Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKV----------------------------------KDFVPL 46 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~----------------------------------~~~~~~ 46 (262) |+||+|||+.. ..+..++.+.+.||.+.+...+.. ...... T Consensus 3 mIID~H~Hl~~-----~~~~~~~~~~~~gi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~l 77 (272) T 3cjp_A 3 LIIDGHTHVIL-----PVEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKEL 77 (272) T ss_dssp CCEEEEEECCS-----SHHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHHHHH T ss_pred CEEEEECCCCC-----CHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH T ss_conf 08988727978-----8799999999859987998479997120788999998555323699834401355558999999 Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-CC Q ss_conf 99998557233211244544334467889988531001333210044677553322111024678999987664204-42 Q gi|254780215|r 47 IKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITG-IP 125 (262) Q Consensus 47 ~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~-~p 125 (262) .++++++|+.+.+..+++|+... ....+++........+.++++..-. ... ...++..++.+.+++ +| T Consensus 78 ~~~~~~~p~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~----~~~----~~~~~~~~~~~~e~~~lp 146 (272) T 3cjp_A 78 TNVIQAYPSRYVGFGNVPVGLSE---NDTNSYIEENIVNNKLVGIGELTPA----SGQ----IKSLKPIFKYSMDSGSLP 146 (272) T ss_dssp HHHHHHSTTTEEEEECCCTTCCH---HHHHHHHHHHTTTTTCSEEEEECCC----TTC----GGGGHHHHHHHHHTTCCC T ss_pred HHHHHHCCCEEEEEEECCCCCCH---HHHHHHHHHHHHHCCCCCCCCCCCC----CCC----CHHHHHHHHHHHHCCCCE T ss_conf 99999789928999974689986---8999999999864574333345776----557----565789999999809965 Q ss_pred CEEECHHH-----HHHHHHHHHHHHHCCCCCCCC-EECCCCHHHHHHHHCC--CCEEECCCCCCHHHHHHHHHHHHCCCC Q ss_conf 03300023-----335799985310003675331-1214640234432103--520202332211333223333210566 Q gi|254780215|r 126 LVIHSRSA-----DDDMAAILQEEMKKGPFPFVI-HCFSSSQKLADICLEL--GGYISFTGMITFPKYDALRAIARGIPM 197 (262) Q Consensus 126 v~iH~r~a-----~~~~l~iL~~~~~~~~~~~i~-H~FsG~~~~~~~~l~~--g~y~S~~g~i~~~~~~~~~e~v~~iPl 197 (262) +++|+... ..++.++++++ +..++++ |+..+....+-+.++. +.|+.+++..+ ..++++++..+. T Consensus 147 v~~H~~~~~~~~~~~~~~~~~~~~---P~l~iv~~H~G~~~~~~~~~~l~~~~n~y~d~s~~~~----~~~~~~~~~~g~ 219 (272) T 3cjp_A 147 IWIHAFNPLVLQDIKEIAELCKAF---PKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAYFS----TFVLKIVINELP 219 (272) T ss_dssp EEECCSTTCCHHHHHHHHHHHHHS---TTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTCSC----HHHHHHHHHHST T ss_pred EEEECCCCCCCCCHHHHHHHHHHC---CCCCEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCH----HHHHHHHHHHCC T ss_conf 997034455656899999999868---8884799807886499999999858965885233436----999999999798 Q ss_pred CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 7179830786678777688758824499999999987289989999999999999842 Q gi|254780215|r 198 DRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 198 driLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262) ||||.+||.||..+. ..++.+.+ .+++.++..++.++|+.|||| T Consensus 220 dRilfGSD~P~~~~~-------------~~~~~i~~-~~l~~e~~~~I~~~NA~rl~~ 263 (272) T 3cjp_A 220 LKCIFGTDMPFGDLQ-------------LSIEAIKK-MSNDSYVANAVLGDNISRLLN 263 (272) T ss_dssp TTEECCCCTTSSCHH-------------HHHHHHHH-HCSSHHHHHHHHTHHHHHHHT T ss_pred CEEEEECCCCCCCHH-------------HHHHHHHH-CCCCHHHHHHHHHHHHHHHHC T ss_conf 919996999999989-------------99999996-698999999998689999868 No 18 >3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TIM-barrel protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A Probab=99.60 E-value=1e-13 Score=110.55 Aligned_cols=210 Identities=10% Similarity=0.098 Sum_probs=134.0 Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCH-----HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE Q ss_conf 2689999999986998999916798-----77899999998557233211244544334467889988531001333210 Q gi|254780215|r 16 EDRHDVIMRAHQANVLKMIAIAIKV-----KDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVA 90 (262) Q Consensus 16 ~d~~~~i~~a~~~gv~~~i~~~~~~-----~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~a 90 (262) .+.++.++.+..+||.+.|+++... .+.+...+++++||+.+.+..+++|+.. +...+++++.... .+++ T Consensus 47 ~~~e~~l~~Md~~GI~~~vl~~~~~~~~~~~~N~~~~~~~~~~pdR~~~~a~v~p~~~----~~a~~el~~~~~~-G~~g 121 (291) T 3irs_A 47 KSLELMFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGSIEAATR----KEAMAQMQEILDL-GIRI 121 (291) T ss_dssp TCHHHHHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEECCCSSH----HHHHHHHHHHHHT-TCCC T ss_pred CCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCH----HHHHHHHHHHHHC-CCEE T ss_conf 9999999999980996999964576644576879999999978991998026898875----9999999999865-9738 Q ss_pred EC----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHH--------HHH-HHHHHHHHHHHCCCCCCCC-EE Q ss_conf 04----4677553322111024678999987664204420330002--------333-5799985310003675331-12 Q gi|254780215|r 91 IG----ETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRS--------ADD-DMAAILQEEMKKGPFPFVI-HC 156 (262) Q Consensus 91 IG----EiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~--------a~~-~~l~iL~~~~~~~~~~~i~-H~ 156 (262) |+ .-|.+++-+ -..|...++.|.++++||.+|+-. +.- .+-+++.++ +..++++ |+ T Consensus 122 v~l~p~~~~~~~~~~-------d~~~~p~~~~a~e~glpv~iH~g~~~~~~~~~~~p~~l~~~~~r~---P~l~~v~~H~ 191 (291) T 3irs_A 122 VNLEPGVWATPMHVD-------DRRLYPLYAFCEDNGIPVIMMTGGNAGPDITYTNPEHIDRVLGDF---PDLTVVSSHG 191 (291) T ss_dssp EEECGGGSSSCCCTT-------CGGGHHHHHHHHHTTCCEEEECSSSCSSSGGGGCHHHHHHHHHHC---TTCCEEEEGG T ss_pred EEEECCCCCCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC---CCCEEEEECC T ss_conf 998647767897999-------889999999999739869981477777422348999974345309---9967999458 Q ss_pred CCCCHHHHHHHHC-----CCCEEECCCCCC-HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 1464023443210-----352020233221-1333223333210566717983078667877768875882449999999 Q gi|254780215|r 157 FSSSQKLADICLE-----LGGYISFTGMIT-FPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKA 230 (262) Q Consensus 157 FsG~~~~~~~~l~-----~g~y~S~~g~i~-~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~ 230 (262) .+ .....+++ -+.|+..|.... ......+.+++..+..||+|.-||.|+.. ....++. T Consensus 192 -G~--~~~~~~~~~~~~~~Nvy~d~s~~~~~~~~~~~~~~~~~~~g~dRvlfGSD~P~~~-------------~~~~~~~ 255 (291) T 3irs_A 192 -NW--PWVQEIIHVAFRRPNLYLSPDMYLYNLPGHADFIQAANSFLADRMLFGTAYPMCP-------------LKEYTEW 255 (291) T ss_dssp -GT--TCHHHHHHHHHHCTTEEEECGGGGSSSTTHHHHHHHHTTGGGGTBCCCCCBTSSC-------------HHHHHHH T ss_pred -CC--CHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC-------------HHHHHHH T ss_conf -87--3299999998768977997333044577679999999984998099968999999-------------8999999 Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 998728998999999999999984256 Q gi|254780215|r 231 LAKEKDVSYEDLMEETTKNALKLFSKI 257 (262) Q Consensus 231 iA~i~~~~~eei~~~~~~N~~~~f~~~ 257 (262) +.. .+++.++..++.++|+.||||+- T Consensus 256 ~~~-~~l~~e~~~~Il~~NA~rl~gl~ 281 (291) T 3irs_A 256 FLT-LPIKPDAMEKILHGNAERLLAQA 281 (291) T ss_dssp HHT-SSCCHHHHHHHHTHHHHHHHHHS T ss_pred HHH-CCCCHHHHHHHHHHHHHHHHCCC T ss_conf 996-79799999999849999996736 No 19 >2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein structure initiative; 1.80A {Rhodopseudomonas palustris CGA009} SCOP: c.1.9.15 Probab=99.53 E-value=1.9e-13 Score=108.80 Aligned_cols=228 Identities=13% Similarity=0.109 Sum_probs=129.2 Q ss_pred HHHHHHHHCCCCEEEEECCCH---------H--------HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 999999986998999916798---------7--------78999999985572332112445443344678899885310 Q gi|254780215|r 20 DVIMRAHQANVLKMIAIAIKV---------K--------DFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCL 82 (262) Q Consensus 20 ~~i~~a~~~gv~~~i~~~~~~---------~--------~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l 82 (262) ..++.+...||...|...+.. + ..+.+.+++++||+.+.+...+ |.......+...+++++. T Consensus 53 ~~l~~Md~~Gid~~vl~~~~~~~~~~~~~~~~~~~~~~~~Nd~~a~~~~~~PdR~~g~~~v-p~~~~~d~~~a~~Eler~ 131 (350) T 2gwg_A 53 NQLKKMQERGSDLTVFSPRASFMAHHIGDFNVSSTWAAICNELCYRVSQLFPDNFIGAAML-PQSPGVDPKTCIPELEKC 131 (350) T ss_dssp THHHHHHHHTCCEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEEC-CCCTTSCGGGGHHHHHHH T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE-CCCCCCCHHHHHHHHHHH T ss_conf 9999999809939998466510230346778899999999999999999789908999983-887788999999999999 Q ss_pred CCCCCCCEECC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHH-------------HHH--------H Q ss_conf 01333210044--677553322111024678999987664204420330002333-------------579--------9 Q gi|254780215|r 83 ASHPRVVAIGE--TGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADD-------------DMA--------A 139 (262) Q Consensus 83 ~~~~~~~aIGE--iGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~-------------~~l--------~ 139 (262) ..+..++||.= .....++...+.. -..|....+.|.++++||.+|+-.... +.. . T Consensus 132 v~~~G~~Gi~l~~~~~~~~~~~~~~~--d~~~~p~~~~~~e~~~pv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 209 (350) T 2gwg_A 132 VKEYGFVAINLNPDPSGGHWTSPPLT--DRIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGD 209 (350) T ss_dssp HHTSCCCEEEECSCTTSSCCCSCCTT--SGGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHHHHHHHSC T ss_pred HHHCCCEEEEEECCCCCCCCCCCCCC--CHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC T ss_conf 97268629999366678757898988--7667799999997598399837999875442233445432212001255435 Q ss_pred HHHHHHHCCCCCCCC-EECCCCHH-HHHHH---HC------------CCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEE Q ss_conf 985310003675331-12146402-34432---10------------352020233221133322333321056671798 Q gi|254780215|r 140 ILQEEMKKGPFPFVI-HCFSSSQK-LADIC---LE------------LGGYISFTGMITFPKYDALRAIARGIPMDRVLV 202 (262) Q Consensus 140 iL~~~~~~~~~~~i~-H~FsG~~~-~~~~~---l~------------~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLl 202 (262) ++++ .+..++|+ |+ .|..- .+.++ .. .++||-.+.. . ...++.+++.++.||||. T Consensus 210 v~~r---fP~Lk~v~~H~-G~~~p~~~~r~~~~~~~~~~~~~~~~~~~n~y~dt~~~--~--~~~~~~~~~~~g~drimf 281 (350) T 2gwg_A 210 LFKD---FPELKFVIPHG-GGAVPYHWGRFRGLAQEMKKPLLEDHVLNNIFFDTCVY--H--QPGIDLLNTVIPVDNVLF 281 (350) T ss_dssp HHHH---CTTCCEEESGG-GTTTGGGHHHHHHHHHHTTCCCHHHHTTTTEEEECCCC--S--HHHHHHHHHHSCGGGEEC T ss_pred HHHH---CCCCCEEEEEC-CCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEECCCC--C--HHHHHHHHHHCCCCEEEE T ss_conf 1432---89877898525-65506388999999986067623777616578855778--8--799999999719882999 Q ss_pred EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 30786678777688758824499999999987289989999999999999842568750 Q gi|254780215|r 203 ETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKISECV 261 (262) Q Consensus 203 ETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~~~~~ 261 (262) -||-|+..+... .........+.+.+...-+++.++..++...|+.|+|+|++..+ T Consensus 282 GSD~P~~~~~~~---~~~~~~~~~~~~~~~~~~~Ls~~~~~~Il~~NA~rLf~rl~~~~ 337 (350) T 2gwg_A 282 ASEMIGAVRGID---PRTGFYYDDTKRYIEASTILTPEEKQQIYEGNARRVYPRLDAAL 337 (350) T ss_dssp CCCCSSSCCCEE---TTTTEETTCTHHHHHHCSSSCHHHHHHHHTHHHHHHCHHHHHHH T ss_pred ECCCCCCCCCCC---CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHH T ss_conf 179999867768---65565477899999864898999999997888999998769988 No 20 >2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putative; TIM-barrel protein., structural genomics, PSI, protein structure initiative; 2.61A {Pseudomonas putida KT2440} SCOP: c.1.9.15 Probab=99.49 E-value=5.5e-12 Score=99.03 Aligned_cols=230 Identities=15% Similarity=0.083 Sum_probs=134.1 Q ss_pred EEEEECCCCCHHH------------HCCHHHHHHHHHHCCCCEEEEECCC--HHHHHHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 1686138887565------------2268999999998699899991679--8778999999985572332112445443 Q gi|254780215|r 2 LIDTHCHLLLPDF------------DEDRHDVIMRAHQANVLKMIAIAIK--VKDFVPLIKLCQDYPSSIFCSVGTHPCH 67 (262) Q Consensus 2 ~iD~H~HL~~~~~------------~~d~~~~i~~a~~~gv~~~i~~~~~--~~~~~~~~~l~~~~p~~i~~a~GiHP~~ 67 (262) .||+|||+-...+ +...+++++.+..+||++.|.++.. ..+.....++++++|+.......++|.. T Consensus 14 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~e~ll~~m~~~GV~~aV~~~~~~~~~~n~~~~~~~~~~p~r~~~~~~~~~~~ 93 (288) T 2ffi_A 14 AIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQTVPGQLRGVVMLERDV 93 (288) T ss_dssp CEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHHHSTTTBCCBBCCCSSC T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 38715256078666666677898999999999999997499589997786675557999999986025612787158663 Q ss_pred CCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHH-HHHHHHHHHHHHH Q ss_conf 344678899885310013332100446775533221110246789999876642044203300023-3357999853100 Q gi|254780215|r 68 AHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSA-DDDMAAILQEEMK 146 (262) Q Consensus 68 ~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a-~~~~l~iL~~~~~ 146 (262) .+...+.+... .+.+++..+........... .++..++.+.+++.++.+|+-.. .....+.++.. T Consensus 94 ----~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 159 (288) T 2ffi_A 94 ----EQATLAEMARL----GVRGVRLNLMGQDMPDLTGA----QWRPLLERIGEQGWHVELHRQVADIPVLVRALQPY-- 159 (288) T ss_dssp ----CHHHHHHHHTT----TCCEEECCCSSSCCCCTTST----TTHHHHHHHHHHTCEEEECSCTTTHHHHHHHHTTT-- T ss_pred ----CHHHHHHHHHC----CCCEEEECCCCCCCCCCCCH----HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH-- T ss_conf ----17899998751----61246522565788775658----99999999999589643464611069999987630-- Q ss_pred CCCCCCCC-EE---------CCCCHHHHHHHHC-CCCEEECCCCCCHH---------HHHHHHHHHHCCCCCCEEEEECC Q ss_conf 03675331-12---------1464023443210-35202023322113---------33223333210566717983078 Q gi|254780215|r 147 KGPFPFVI-HC---------FSSSQKLADICLE-LGGYISFTGMITFP---------KYDALRAIARGIPMDRVLVETDS 206 (262) Q Consensus 147 ~~~~~~i~-H~---------FsG~~~~~~~~l~-~g~y~S~~g~i~~~---------~~~~~~e~v~~iPldriLlETDs 206 (262) +.+.++ |. .......+....+ .+.|+.+++...+. ....++.++..++.||||..||. T Consensus 160 --~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~s~~~~~~~~~~~~~~~~~~~l~~~i~~~G~dRilfGSD~ 237 (288) T 2ffi_A 160 --GLDIVIDHFGRPDARRGLGQPGFAELLTLSGRGKVWVKVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSDW 237 (288) T ss_dssp --TCCEEESGGGSCCTTSCTTCTTHHHHTTCCCCSCEEEEEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCT T ss_pred --CCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC T ss_conf --463342133566534565417899999742258847966834001577530166778999999998599958994899 Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 6678777688758824499999999987289989999999999999842 Q gi|254780215|r 207 PYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 207 P~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262) |+.. .++ . ......++.+.+ .+++.++..+++++|+.|||| T Consensus 238 P~~~---~~~-~---~~~~~~~~~~~~-~~l~~~~~~~Il~~NA~rlfg 278 (288) T 2ffi_A 238 PHTQ---HES-E---VSFGSAVEQFEA-LGCSAQLRQALLLDTARALFG 278 (288) T ss_dssp TCTT---CTT-T---CCHHHHHHHHHH-HCCCHHHHHHHHTHHHHHHTT T ss_pred CCCC---CCC-C---CCHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHC T ss_conf 9987---667-8---999999999985-499999999998474999869 No 21 >2qpx_A Predicted metal-dependent hydrolase of the TIM- barrel fold; YP_805737.1, putative metal-dependent hydrolase, structural genomics; HET: KCX MSE; 1.40A {Lactobacillus casei atcc 334} Probab=99.46 E-value=5.6e-13 Score=105.61 Aligned_cols=147 Identities=13% Similarity=0.146 Sum_probs=94.5 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEECHHHHH----------HHHHHHHHHHHCCCCCC-CCEECCCCHHHHHHHHCC-CCE Q ss_conf 024678999987664204420330002333----------57999853100036753-311214640234432103-520 Q gi|254780215|r 106 EEQKVVFLRHIEASRITGIPLVIHSRSADD----------DMAAILQEEMKKGPFPF-VIHCFSSSQKLADICLEL-GGY 173 (262) Q Consensus 106 e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~----------~~l~iL~~~~~~~~~~~-i~H~FsG~~~~~~~~l~~-g~y 173 (262) ..|..+|..++++|.++++|+.+|+..... .+.++|.++... ..++ +.|||....+.+..+... +.| T Consensus 205 ~~~~~~l~~~~e~a~e~~lpvqiH~G~~~~~~~~~~~~p~~l~~~l~~~~~~-~~~~v~~h~~p~~~e~~~la~~~~nv~ 283 (376) T 2qpx_A 205 PLIDYMLYHVAPFIIAQDMPLQFHVGYGDADTDMYLGNPLLMRDYLKAFTKK-GLKVVLLHCYPYHREAGYLASVFPNLY 283 (376) T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEESCCCTTSCGGGCCGGGGHHHHHHHGGG-TCCEEEEECTTCHHHHHHHHHHSTTEE T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCC-CCEEEEECCCCCHHHHHHHHHHCCCEE T ss_conf 8999999999999996699489822788899601001668799999816676-886999899965799999997579566 Q ss_pred EECCCCCCHHH---HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH----HHHHHH Q ss_conf 20233221133---32233332105667179830786678777688758824499999999987289989----999999 Q gi|254780215|r 174 ISFTGMITFPK---YDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYE----DLMEET 246 (262) Q Consensus 174 ~S~~g~i~~~~---~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~e----ei~~~~ 246 (262) ++.+.+..+.. ...+++++...|.+||+..||+|++.|..+.+.. ..-...+..+.+.-.++.+ .+..++ T Consensus 284 ~d~~~~~~~~~~~~~~~l~~~~~~~~~~kvlf~TD~~~~~~~~~~~~~---~~r~~l~~~l~e~~~~~~~~~~e~~~~I~ 360 (376) T 2qpx_A 284 FDISLLDNLGPSGASRVFNEAVELAPYTRILFASDASTYPEMYGLAAR---QFKQALVAHFNQLPFVDLAQKKAWINAIC 360 (376) T ss_dssp EECTTHHHHSGGGHHHHHHHHTSSSCGGGEECCCCCCBSHHHHHHHHH---HHHHHHHHHHHTCSSCCHHHHHHHHHHHH T ss_pred ECCCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH---HHHHHHHHHHHHHCCCCHHHHHHHHHHHH T ss_conf 467458856776799999999996088819997999767613417999---99999999999825687666899999999 Q ss_pred HHHHHHHHHH Q ss_conf 9999998425 Q gi|254780215|r 247 TKNALKLFSK 256 (262) Q Consensus 247 ~~N~~~~f~~ 256 (262) ++|+.|+||- T Consensus 361 ~~NA~r~ygl 370 (376) T 2qpx_A 361 WQTSAKLYHQ 370 (376) T ss_dssp THHHHHHTTC T ss_pred HHHHHHHHCC T ss_conf 8999999589 No 22 >2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens} Probab=99.38 E-value=5.9e-12 Score=98.84 Aligned_cols=219 Identities=14% Similarity=0.100 Sum_probs=122.5 Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHH----------------HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 6899999999869989999167987----------------789999999855723321124454433446788998853 Q gi|254780215|r 17 DRHDVIMRAHQANVLKMIAIAIKVK----------------DFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELV 80 (262) Q Consensus 17 d~~~~i~~a~~~gv~~~i~~~~~~~----------------~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~ 80 (262) +.+..++.+...||.+.+...+... ......+.+++||+.+.+...+.|+.. +...+++. T Consensus 55 d~e~~l~~Md~~GId~~vl~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~Rf~g~~~v~~~~~----~~~~~e~~ 130 (336) T 2wm1_A 55 DPEVRIREMDQKGVTVQALSTVPVMFSYWAKPEDTLNLCQLLNNDLASTVVSYPRRFVGLGTLPMQAP----ELAVKEME 130 (336) T ss_dssp CHHHHHHHHHHHTCCEEEEECCGGGGCTTSCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEECCCTTSH----HHHHHHHH T ss_pred CHHHHHHHHHHCCCCEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH----HHHHHHHH T ss_conf 99999999998499699985782675324681789999999999999998768991886304886675----89999999 Q ss_pred HHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH-------------------------H Q ss_conf 100133321004467755332211102467899998766420442033000233-------------------------3 Q gi|254780215|r 81 CLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSAD-------------------------D 135 (262) Q Consensus 81 ~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~-------------------------~ 135 (262) .......++++ .+|-.+ ...+ ..-..|....+.|.++++||.+|+=... . T Consensus 131 ~~~~~~g~~g~-~~~~~~--~~~~--~~d~~~~pi~~~~~e~~~pv~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (336) T 2wm1_A 131 RCVKELGFPGV-QIGTHV--NEWD--LNAQELFPVYAAAERLKCSLFVHPWDMQMDGRMAKYWLPWLVGMPAETTIAICS 205 (336) T ss_dssp HHHHTSCCSEE-EEESEE--TTEE--TTCGGGHHHHHHHHHHTCEEEEECCSCCCSGGGSSTTHHHHTHHHHHHHHHHHH T ss_pred HHHHCCCCCEE-ECCCCC--CCCC--CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 99871695457-505546--8878--896122147898742497089818885444533332211133342667788777 Q ss_pred HHH-HHHHHHHHCCCCCCCC-EECCCCH-HHHHHHH---CC--CCEE---ECCCCC--------CHH-HHHHHHHHHHCC Q ss_conf 579-9985310003675331-1214640-2344321---03--5202---023322--------113-332233332105 Q gi|254780215|r 136 DMA-AILQEEMKKGPFPFVI-HCFSSSQ-KLADICL---EL--GGYI---SFTGMI--------TFP-KYDALRAIARGI 195 (262) Q Consensus 136 ~~l-~iL~~~~~~~~~~~i~-H~FsG~~-~~~~~~l---~~--g~y~---S~~g~i--------~~~-~~~~~~e~v~~i 195 (262) ..+ .++++ .+..++++ |+ .|.. ..+.++. +. ..+. +.++.. ++. ....++.+++.+ T Consensus 206 ~~~~~v~~r---~P~l~~v~~h~-G~~~p~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (336) T 2wm1_A 206 MIMGGVFEK---FPKLKVCFAHG-GGAFPFTVGRISHGFSMRPDLCAQDNPMNPKKYLGSFYTDALVHDPLSLKLLTDVI 281 (336) T ss_dssp HHHTTHHHH---CTTCCEEESGG-GTTHHHHHHHHHHHHHHCHHHHSSSCCSCGGGGTTSSEEECCCCSHHHHHHHHHHH T ss_pred HHHHHHHHH---CCCCCEEECCC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH T ss_conf 664048876---89977770104-42148899999988764554322457668899833320157668999999999972 Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 667179830786678777688758824499999999987289989999999999999842568750 Q gi|254780215|r 196 PMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKISECV 261 (262) Q Consensus 196 PldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~~~~~ 261 (262) +.||||..||-|+.... ..+. +.+..+.+++.++...+..+|+.|||| ++++. T Consensus 282 G~drlmfGSD~P~~~~~------~~~~------~~~~~~~~l~e~~~~~Il~~NA~rl~g-l~~~~ 334 (336) T 2wm1_A 282 GKDKVILGTDYPFPLGE------LEPG------KLIESMEEFDEETKNKLKAGNALAFLG-LERKQ 334 (336) T ss_dssp CTTSEECCCCBTSTTSC------SSTT------HHHHTCTTSCHHHHHHHHTHHHHHHHT-CCC-- T ss_pred CCCEEEEECCCCCCCCC------CCHH------HHHHHCCCCCHHHHHHHHHHHHHHHHC-CCHHH T ss_conf 99959994888998887------6989------999872799999999998589999858-79776 No 23 >2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase; ACMSD, TIM-barrel, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A Probab=99.26 E-value=3.9e-10 Score=86.74 Aligned_cols=209 Identities=13% Similarity=0.069 Sum_probs=120.8 Q ss_pred CHHHHHHHHHHCCCCEEEEECCC--------HHH--------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 68999999998699899991679--------877--------89999999855723321124454433446788998853 Q gi|254780215|r 17 DRHDVIMRAHQANVLKMIAIAIK--------VKD--------FVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELV 80 (262) Q Consensus 17 d~~~~i~~a~~~gv~~~i~~~~~--------~~~--------~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~ 80 (262) +.++.++.+.+.||.+.|..++. ++. .+.+.+++++||+.+.+...++|... +...++++ T Consensus 59 ~~~~~l~~Md~~gId~avl~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~R~~~~~~v~~~~~----~~a~~el~ 134 (334) T 2hbv_A 59 DPAFRIEEMDAQGVDVQVTCATPVMFGYTWEANKAAQWAERMNDFALEFAAHNPQRIKVLAQVPLQDL----DLACKEAS 134 (334) T ss_dssp CHHHHHHHHHHHTCSEEEEEECGGGCCTTSCHHHHHHHHHHHHHHHHHHHTTCTTTEEECBCCCTTSH----HHHHHHHH T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCH----HHHHHHHH T ss_conf 99999999998699689990674020366788999999999999999999878994776676796478----99999999 Q ss_pred HHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHH------------------HHH---- Q ss_conf 1001333210044677553322111024678999987664204420330002333------------------579---- Q gi|254780215|r 81 CLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADD------------------DMA---- 138 (262) Q Consensus 81 ~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~------------------~~l---- 138 (262) ..... ..+++. ++-.+ .........|....+.|.++++||.+|+-..-. ... T Consensus 135 r~~~~-g~~g~~-l~~~~----~~~~~~d~~~~p~~~~~~e~~~pv~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (334) T 2hbv_A 135 RAVAA-GHLGIQ-IGNHL----GDKDLDDATLEAFLTHCANEDIPILVHPWDMMGGQRMKKWMLPWLVAMPAETQLAILS 208 (334) T ss_dssp HHHHH-TCCCEE-EESCB----TTBCTTSHHHHHHHHHHHHTTCCEEEECCSCSCTTTTCSTTHHHHTHHHHHHHHHHHH T ss_pred HHHHH-HCCCEE-CCCCC----CCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHHH T ss_conf 86555-305100-16888----8988887788999997653277389816899863100000000012460666778777 Q ss_pred ----HHHHHHHHCCCCCCCCEECCCCHHHH-HH---------------------HHCCCCEEECCCCCCHHHHHHHHHHH Q ss_conf ----99853100036753311214640234-43---------------------21035202023322113332233332 Q gi|254780215|r 139 ----AILQEEMKKGPFPFVIHCFSSSQKLA-DI---------------------CLELGGYISFTGMITFPKYDALRAIA 192 (262) Q Consensus 139 ----~iL~~~~~~~~~~~i~H~FsG~~~~~-~~---------------------~l~~g~y~S~~g~i~~~~~~~~~e~v 192 (262) .+++++. . ..++++|...|..... .+ +.+.-+|.|.. +. ...++.++ T Consensus 209 l~~~~v~~r~P-~-~~~i~~~~ggg~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~i 281 (334) T 2hbv_A 209 LILSGAFERIP-K-SLKICFGHGGGSFAFLLGRVDNAWRHRDIVREDCPRPPSEYVDRFFVDSAV----FN-PGALELLV 281 (334) T ss_dssp HHHTTGGGTSC-T-TCCEEESGGGTTHHHHHHHHHHHHHHCHHHHTTCCSCGGGGGGGCEEECCC----SS-HHHHHHHH T ss_pred HHHCCHHHHCC-C-CCEEEECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHCCCCCCCCC----CC-HHHHHHHH T ss_conf 76414998788-8-758986267530341789999986414011013445889984033434367----89-99999999 Q ss_pred HCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 105667179830786678777688758824499999999987289989999999999999842 Q gi|254780215|r 193 RGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 193 ~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262) +.++.||||.-||.|+.... ..+.. +.+..+++.++..++.++|+.|||| T Consensus 282 ~~~G~drilfGSD~P~~~~~------~~~~~-------~~~~~~l~e~~~~~I~~~NA~rl~~ 331 (334) T 2hbv_A 282 SVMGEDRVMLGSDYPFPLGE------QKIGG-------LVLSSNLGESAKDKIISGNASKFFN 331 (334) T ss_dssp HHHCGGGEECCCCBTSTTSC------SSTTH-------HHHTSSCCHHHHHHHHTHHHHHHHT T ss_pred HHHCCCEEEEECCCCCCCCH------HHHHH-------HHHHCCCCHHHHHHHHHHHHHHHHC T ss_conf 97199939995899998760------20899-------9975797999999998099999868 No 24 >2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, tryptophan-NDA metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum WCFS1} SCOP: c.1.9.15 Probab=99.22 E-value=2.1e-09 Score=81.86 Aligned_cols=229 Identities=14% Similarity=0.124 Sum_probs=133.8 Q ss_pred EEEEECCCCCHHH------------------HCCHHHHHHHHHHCCCCEEEEE-C------CCHHH--------HHHHHH Q ss_conf 1686138887565------------------2268999999998699899991-6------79877--------899999 Q gi|254780215|r 2 LIDTHCHLLLPDF------------------DEDRHDVIMRAHQANVLKMIAI-A------IKVKD--------FVPLIK 48 (262) Q Consensus 2 ~iD~H~HL~~~~~------------------~~d~~~~i~~a~~~gv~~~i~~-~------~~~~~--------~~~~~~ 48 (262) .||+|+|+--..+ .-+.+..++.+...||.+.|.. + .++.. .+...+ T Consensus 3 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~md~~gI~~avls~~~~~~~~~~~~~~~~~~~~~N~~~~~ 82 (307) T 2f6k_A 3 KIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDDGKS 82 (307) T ss_dssp EEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHHHHH T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 38864089988999999984687877776889999999999998699899991787544446756799999999999999 Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE Q ss_conf 99855723321124454433446788998853100133321004467755332211102467899998766420442033 Q gi|254780215|r 49 LCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVI 128 (262) Q Consensus 49 l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~i 128 (262) .+++||+.+.+ ++.-|.. ..+...+++++......++|+- +.- .+... ... -..|....+.|.++++||.+ T Consensus 83 ~~~~~PdR~~~-~a~ip~~---~~~~~~~el~r~~~~~g~~G~~-l~~-~~~~~-~~~--d~~~~p~~~~~~e~~~pv~~ 153 (307) T 2f6k_A 83 LAQQYPDQLGY-LASLPIP---YELDAVKTVQQALDQDGALGVT-VPT-NSRGL-YFG--SPVLERVYQELDARQAIVAL 153 (307) T ss_dssp HHHHCTTTEEE-EECCCTT---CHHHHHHHHHHHHHTSCCSEEE-EES-EETTE-ETT--CGGGHHHHHHHHTTTCEEEE T ss_pred HHHHCCCEEEE-EEEECCC---CHHHHHHHHHHHHHCCCEEEEE-ECC-CCCCC-CCC--CHHHHHHHHHHHHCCCCEEE T ss_conf 99978991999-9982798---7788999999998606916998-478-77898-999--87889999999976993674 Q ss_pred ECHHHH-------------------HH---HHH-----HHHHHHHCCCCCCCC-EECCCCHHH-HHHH-------H---- Q ss_conf 000233-------------------35---799-----985310003675331-121464023-4432-------1---- Q gi|254780215|r 129 HSRSAD-------------------DD---MAA-----ILQEEMKKGPFPFVI-HCFSSSQKL-ADIC-------L---- 168 (262) Q Consensus 129 H~r~a~-------------------~~---~l~-----iL~~~~~~~~~~~i~-H~FsG~~~~-~~~~-------l---- 168 (262) |..... +. +.+ ++++ .+..++|+ |+ .|.... +.++ . T Consensus 154 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~gv~~r---~P~lk~i~~H~-G~~~p~~~~r~~~~~~~~~~~~~ 229 (307) T 2f6k_A 154 HPNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFEK---YPNIKVIIPHA-GAFLGIVDDRIAQYAQKVYQVDV 229 (307) T ss_dssp ECCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHHH---CTTCEEEESGG-GTTHHHHHHHHHHHHHHHHCCCH T ss_pred CCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCHHHH---CCCCCEEEECC-CCCHHHHHHHHHHHHHHCCCCHH T ss_conf 169987776655555652122017889999999997345764---79985899746-65368899999864221243025 Q ss_pred ---CCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH Q ss_conf ---03520202332211333223333210566717983078667877768875882449999999998728998999999 Q gi|254780215|r 169 ---ELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEE 245 (262) Q Consensus 169 ---~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~ 245 (262) -.+.|+-.++... ...++.+++.++.||||.-||.|+.. ........+.+....+++.++..++ T Consensus 230 ~~~~~n~y~dts~~~~---~~~l~~~~~~~g~drvlfGSD~P~~~----------~~~~~~~~~~~~~~~~l~~~~~~~I 296 (307) T 2f6k_A 230 YDVMHHVYFDVAGAVL---PRQLPTLMSLAQPEHLLYGSDIPYTP----------LDGSRQLGHALATTDLLTNEQKQAI 296 (307) T ss_dssp HHHHHHSEEECCSSCT---TTHHHHHTTTSCGGGEECCCCTTTSC----------HHHHHHHHHHHHHCTTSCHHHHHHH T ss_pred HHHHCCEEEEECCCCC---HHHHHHHHHHCCCCEEEEECCCCCCC----------CCCCHHHHHHHHHCCCCCHHHHHHH T ss_conf 6674271686324578---89999999962999499968999998----------7544469999985279899999999 Q ss_pred HHHHHHHHHHH Q ss_conf 99999998425 Q gi|254780215|r 246 TTKNALKLFSK 256 (262) Q Consensus 246 ~~~N~~~~f~~ 256 (262) ..+|+.|++|+ T Consensus 297 ~~~NA~rllg~ 307 (307) T 2f6k_A 297 FYDNAHRLLTE 307 (307) T ss_dssp HTHHHHHHHHC T ss_pred HHHHHHHHHCC T ss_conf 81999998392 No 25 >2dvt_A Thermophilic reversible gamma-resorcylate decarboxylase; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* Probab=99.17 E-value=1.7e-09 Score=82.50 Aligned_cols=230 Identities=13% Similarity=0.131 Sum_probs=133.7 Q ss_pred CEEEEECCCCCHHHHCC--------------------HHHHHHHHHHCCCCEEEE-EC-------CCHH--------HHH Q ss_conf 91686138887565226--------------------899999999869989999-16-------7987--------789 Q gi|254780215|r 1 MLIDTHCHLLLPDFDED--------------------RHDVIMRAHQANVLKMIA-IA-------IKVK--------DFV 44 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d--------------------~~~~i~~a~~~gv~~~i~-~~-------~~~~--------~~~ 44 (262) +.||.|.|...+++..+ .+.-|+.+-..||..-|. +. .+.+ .++ T Consensus 3 ~~i~~~~h~~~p~~~~~~~~~~~~~~~~~~~~~~~d~~e~rl~~MD~~GId~avl~~~~~~~~~~~~~~~~~~~~r~~Nd 82 (327) T 2dvt_A 3 GKVALEEHFAIPETLQDSAGFVPGDYWKELQHRLLDIQDTRLKLMDAHGIETMILSLNAPAVQAIPDRRKAIEIARRAND 82 (327) T ss_dssp SEEEEEEEECCHHHHGGGTTTSCSSHHHHHHHHHHCSSSHHHHHHHHTTEEEEEEEECSSGGGGCCCHHHHHHHHHHHHH T ss_pred CEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHH T ss_conf 84888852478566887057788642687765448845779999987799399992580563126777889999999999 Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHC Q ss_conf 99999985572332112445443344678899885310013332100446775533--2211102467899998766420 Q gi|254780215|r 45 PLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVAIGETGLDRYH--NAHTIEEQKVVFLRHIEASRIT 122 (262) Q Consensus 45 ~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~--~~~~~e~Q~~vF~~ql~lA~e~ 122 (262) .+.+.+++||+.+.+...++|+.. +...+++++...+..++++. +.-.... .......--.-|....+.|.++ T Consensus 83 ~~~~~~~~~P~Rf~~~a~v~~~d~----~~a~~el~r~~~~~g~~G~~-~~~~~~~~~~~~~~~~~dp~~~p~~~~~~e~ 157 (327) T 2dvt_A 83 VLAEECAKRPDRFLAFAALPLQDP----DAATEELQRCVNDLGFVGAL-VNGFSQEGDGQTPLYYDLPQYRPFWGEVEKL 157 (327) T ss_dssp HHHHHHHHCTTTEEEEECCCTTSH----HHHHHHHHHHHHTTCCCEEE-EESSBCCTTCCSCBCTTSGGGHHHHHHHHHH T ss_pred HHHHHHHHCCCEEEEEEECCCCCH----HHHHHHHHHHHHHCCCEEEE-EECCCCCCCCCCCCCCCCHHHHHHHHHHHHC T ss_conf 999998568595999997387554----77999999998605933999-9477768888766555656789999999975 Q ss_pred CCCCEEECHHHHH-------------------------HHH-----HHHHHHHHCCCCCCCC-EECCCCHHHHHHH---- Q ss_conf 4420330002333-------------------------579-----9985310003675331-1214640234432---- Q gi|254780215|r 123 GIPLVIHSRSADD-------------------------DMA-----AILQEEMKKGPFPFVI-HCFSSSQKLADIC---- 167 (262) Q Consensus 123 ~~pv~iH~r~a~~-------------------------~~l-----~iL~~~~~~~~~~~i~-H~FsG~~~~~~~~---- 167 (262) ++||.+|+-.... .+. .+++++ +..++++ |+-.+-..++.++ T Consensus 158 g~pv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~r~---P~Lkiv~~H~g~~~p~~~~r~d~~~ 234 (327) T 2dvt_A 158 DVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEH---PRLNIILGHMGEGLPYMMWRIDHRN 234 (327) T ss_dssp TCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHHHC---TTCCEEESGGGTTHHHHHHHHHHTT T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECC---CCCCEEEECCCCCHHHHHHHHHHHH T ss_conf 9947852689988655555566434443103525667664367637660018---9862887247642288999998553 Q ss_pred ------------------HCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf ------------------10352020233221133322333321056671798307866787776887588244999999 Q gi|254780215|r 168 ------------------LELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAK 229 (262) Q Consensus 168 ------------------l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~ 229 (262) ...++|++.++.. ..+.++.+++.++.||||.-||-|+.. .....+ T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~G~drimfGSD~P~~~-------------~~~~~~ 298 (327) T 2dvt_A 235 AWVKLPPRYPAKRRFMDYFNENFHITTSGNF---RTQTLIDAILEIGADRILFSTDWPFEN-------------IDHASD 298 (327) T ss_dssp TTCCSCCSSSCSSCHHHHHHHHEEEECTTCC---CHHHHHHHHTTTCGGGEECCCCTTTSC-------------HHHHHH T ss_pred HHCCCCCCCCCCCCHHHHHHCCCCCCCCCCC---CHHHHHHHHHHHCCCEEEEECCCCCCC-------------HHHHHH T ss_conf 4304663222111457876304430457676---879999999986999499808999987-------------577999 Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 99987289989999999999999842 Q gi|254780215|r 230 ALAKEKDVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 230 ~iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262) .+.. .+++.++..++..+|+.|||| T Consensus 299 ~~~~-~~l~~~~~~~Il~~NA~rl~g 323 (327) T 2dvt_A 299 WFNA-TSIAEADRVKIGRTNARRLFK 323 (327) T ss_dssp HHHH-SSSCHHHHHHHHTHHHHHHTT T ss_pred HHHC-CCCCHHHHHHHHHHHHHHHHC T ss_conf 9860-898999999998899999958 No 26 >3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus} Probab=99.14 E-value=1.6e-10 Score=89.22 Aligned_cols=235 Identities=15% Similarity=0.093 Sum_probs=134.9 Q ss_pred CEEEEECCCCCHHH----------------------HCCHHHHHHHHHHCCCCEEEEECCC-------HH--------HH Q ss_conf 91686138887565----------------------2268999999998699899991679-------87--------78 Q gi|254780215|r 1 MLIDTHCHLLLPDF----------------------DEDRHDVIMRAHQANVLKMIAIAIK-------VK--------DF 43 (262) Q Consensus 1 M~iD~H~HL~~~~~----------------------~~d~~~~i~~a~~~gv~~~i~~~~~-------~~--------~~ 43 (262) ..||+|+|+-.+++ ..+.++.++.+...||..++.++.. .+ .. T Consensus 4 ~~ID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~md~~gi~~~v~~~~~~~~~~~~~~~~~~~~~~~N 83 (312) T 3ij6_A 4 TKIDAYAHILPAKYYQKMLSVEPNIPNMFPFIKIKTLMDLDERLTKWPDQNTKQVISLANISPEDFTDSKTSAELCQSAN 83 (312) T ss_dssp CEEEEEEEECCHHHHHHHHHHCTTHHHHCGGGGCHHHHCHHHHHHTCSCTTEEEEEEECSCCGGGTSCHHHHHHHHHHHH T ss_pred CEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH T ss_conf 87888748928699999997487876557777764548999999999984998999868875212489999999999999 Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC Q ss_conf 99999998557233211244544334467889988531001333210044677553322111024678999987664204 Q gi|254780215|r 44 VPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITG 123 (262) Q Consensus 44 ~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~ 123 (262) +.+.+.+..+|+....++++-|.. ..+...+++++.......+++. ++. ...........|...++.|.+++ T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ler~~~~~~~~g~~-l~~----~~~~~~~~~~~~~~~~~~~~~~~ 155 (312) T 3ij6_A 84 EELSNLVDQHPGKFAGAVAILPMN---NIESACKVISSIKDDENLVGAQ-IFT----RHLGKSIADKEFRPVLAQAAKLH 155 (312) T ss_dssp HHHHHHHHHCTTTEEEEEEECCTT---CHHHHHHHHHHHHHCTTEEEEE-EES----EETTEETTSTTTHHHHHHHHHTT T ss_pred HHHHHHHHHCCCCEEEEEEECCCC---CCHHHHHHHHHHHHCCCEEEEE-ECC----CCCCCCCCCHHHHHHHHHHHHCC T ss_conf 999999865886325567856753---5078999999998638836999-544----56898998856523466676423 Q ss_pred CCCEEECHHHHH---------HH-------HHH-HHHHH-HCCCCCCC-CEECCCCHHHHHHHHC----------CCCEE Q ss_conf 420330002333---------57-------999-85310-00367533-1121464023443210----------35202 Q gi|254780215|r 124 IPLVIHSRSADD---------DM-------AAI-LQEEM-KKGPFPFV-IHCFSSSQKLADICLE----------LGGYI 174 (262) Q Consensus 124 ~pv~iH~r~a~~---------~~-------l~i-L~~~~-~~~~~~~i-~H~FsG~~~~~~~~l~----------~g~y~ 174 (262) +||.+|...... .. ..+ +.... ..+..+++ -|+..+-...+...-. .+.|+ T Consensus 156 ~pv~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (312) T 3ij6_A 156 VPLWMHPVFDARKPDNNLVFSWEYELSQAMLQLVQSDLFQDYPNLKILVHHAGAMVPFFSGRIDHILDEKHAQDFKKFYV 235 (312) T ss_dssp CCEEEECCCCTTSSSCCTTTHHHHHHHHHHHHHHHTTHHHHCTTCCEEESGGGTTTTTSHHHHHHHSCHHHHHHGGGCEE T ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCHHE T ss_conf 06999537776765444333541477899999876461222776333650353024889877541101004777431004 Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 02332211333223333210566717983078667877768875882449999999998728998999999999999984 Q gi|254780215|r 175 SFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLF 254 (262) Q Consensus 175 S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f 254 (262) ..++.. ...-++.+++.++.|||+..||.|+.... .........+-+..++|.++..++.++|++|+| T Consensus 236 ~~~~~~---~~~~l~~~i~~~G~dRimfGSD~P~~~~~---------~~~~~~~~~~~~~~~ls~~~~~~Il~~NA~rl~ 303 (312) T 3ij6_A 236 DTAILG---NTPALQLAIDYYGIDHVLFGTDAPFAVMP---------SGADQIITQAINDLTISDKDKQKIFHDNYYSLI 303 (312) T ss_dssp ECCSSS---CHHHHHHHHHHHCGGGEECCCCBTSSSTT---------TCSHHHHHHHHHTSSSCHHHHHHHHTHHHHHHH T ss_pred ECCCCC---CHHHHHHHHHHHCCCEEEEECCCCCCCCC---------CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH T ss_conf 302458---88999999998399829996988988776---------447799999987089799999999808899998 Q ss_pred H Q ss_conf 2 Q gi|254780215|r 255 S 255 (262) Q Consensus 255 ~ 255 (262) + T Consensus 304 ~ 304 (312) T 3ij6_A 304 K 304 (312) T ss_dssp C T ss_pred C T ss_conf 2 No 27 >2qah_A 2-pyrone-4,6-dicarboxylic acid hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Sphingomonas paucimobilis} Probab=99.01 E-value=1e-08 Score=77.31 Aligned_cols=228 Identities=17% Similarity=0.154 Sum_probs=118.0 Q ss_pred EEEEECCCCCH----HH---------HCCHHHHHHHHHHCCCCEEEEECC--CHHHHHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 16861388875----65---------226899999999869989999167--9877899999998557233211244544 Q gi|254780215|r 2 LIDTHCHLLLP----DF---------DEDRHDVIMRAHQANVLKMIAIAI--KVKDFVPLIKLCQDYPSSIFCSVGTHPC 66 (262) Q Consensus 2 ~iD~H~HL~~~----~~---------~~d~~~~i~~a~~~gv~~~i~~~~--~~~~~~~~~~l~~~~p~~i~~a~GiHP~ 66 (262) .||+|||+-.+ ++ +-..++.++.+..+||.+.|.+.. ...+.....+.+++||+.......+.|. T Consensus 27 ~ID~H~Hl~~~~~~~p~~~~~~~~p~~~t~e~ll~~md~~GV~~aV~v~~~~~~~~n~~~~~~~~~~p~r~~gva~v~~~ 106 (303) T 2qah_A 27 AIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHLGFARNVIVQASCHGTDNAATLDAIARAQGKARGIAVVDPA 106 (303) T ss_dssp CEEEEECCBCCTTTSCCCGGGCSCBCCBCHHHHHHHHHHHTCSEEEEECCGGGTTCCHHHHHHHHHTTTSEEEEECCCTT T ss_pred CEECCEECCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCC T ss_conf 87610453484442888999887899999999999999809978999888777665489999876325855999996687 Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCCEEECHH-HHHHHHHHHHH Q ss_conf 33446788998853100133321004467755332211102467899998766420--4420330002-33357999853 Q gi|254780215|r 67 HAHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRIT--GIPLVIHSRS-ADDDMAAILQE 143 (262) Q Consensus 67 ~~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~--~~pv~iH~r~-a~~~~l~iL~~ 143 (262) . .+...+.|.. ..+++|+..+.......... ..+. ..+... ...+..+... ...+...++.. T Consensus 107 ~----~~~~~~~L~~----~~~~Gi~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (303) T 2qah_A 107 I----DEAELAALHE----GGMRGIRFNFLKRLVDDAPK----DKFL---EVAGRLPAGWHVVIYFEADILEELRPFMDA 171 (303) T ss_dssp C----CHHHHHHHHH----TTEEEEEEEECHHHHTTCCH----HHHH---HHHHTCCTTCEEEEEECGGGHHHHHHHHHH T ss_pred C----CHHHHHHHHH----CCEECEEECCCCCCCCCHHH----HHHH---HHHHHHCCCCEEEEECCHHHHHHHHHHHHH T ss_conf 8----8689999986----89104154566677764024----5667---899984068448860448689999988873 Q ss_pred HHHCCCCCCCC-EECCCC---------HHHHHHHHC--CCCEEECCCCC-------CHHHHHH-HHHHHHCCCCCCEEEE Q ss_conf 10003675331-121464---------023443210--35202023322-------1133322-3333210566717983 Q gi|254780215|r 144 EMKKGPFPFVI-HCFSSS---------QKLADICLE--LGGYISFTGMI-------TFPKYDA-LRAIARGIPMDRVLVE 203 (262) Q Consensus 144 ~~~~~~~~~i~-H~FsG~---------~~~~~~~l~--~g~y~S~~g~i-------~~~~~~~-~~e~v~~iPldriLlE 203 (262) + +.++++ |+=... .......+. -+.|+-+|+.- .+..... ++.+++.-| ||+|.. T Consensus 172 ~----p~~iv~~h~g~~~~~~~~~~~~~~~~~~~~~~~~nv~~k~S~~~~~~~~~~~~~~~~~~~~~l~~~g~-dRlmfG 246 (303) T 2qah_A 172 I----PVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSREDIWFKATCPDRLDPAGPPWDDFARSVAPLVADYA-DRVIWG 246 (303) T ss_dssp C----CSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHCTTEEEECCCHHHHCTTCTTCHHHHHHHHHHHHHTT-TSEECC T ss_pred C----CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHC-CCEEEE T ss_conf 8----98589851688865667553657788999865787489705552225668836678999999999719-857995 Q ss_pred ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 07866787776887588244999999999872899899999999999998425 Q gi|254780215|r 204 TDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 204 TDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ||.|+... ++.. .+....++.+.++ ..+.++..++.++|+.|||+. T Consensus 247 SD~P~~~~---~~~~---~~~~~~~~~~~~~-~~~e~~~~~Il~~NA~rly~~ 292 (303) T 2qah_A 247 TDWPHPNM---QDAI---PDDGLVVDMIPRI-APTPELQHKMLVTNPMRLYWS 292 (303) T ss_dssp CCTTCTTC---TTSC---CCHHHHHHTHHHH-SCSHHHHHHHHTHHHHHHHCG T ss_pred CCCCCCCC---CCCC---CCHHHHHHHHHHH-CCCHHHHHHHHHHCHHHHHCC T ss_conf 58999871---3466---9999999999876-879999999997799988495 No 28 >3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A* Probab=98.44 E-value=3.6e-05 Score=53.65 Aligned_cols=149 Identities=13% Similarity=0.072 Sum_probs=93.3 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH--HHHHHHHC--CCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCC Q ss_conf 0246789999876642044203300023335799--98531000--3675331121464023443210352020233221 Q gi|254780215|r 106 EEQKVVFLRHIEASRITGIPLVIHSRSADDDMAA--ILQEEMKK--GPFPFVIHCFSSSQKLADICLELGGYISFTGMIT 181 (262) Q Consensus 106 e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~--iL~~~~~~--~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~ 181 (262) ....+.+......+.+.+.++.+|+......... .+...... .......|+..-..+.++.+.+.|.++.+.+... T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 244 (363) T 3ovg_A 165 RLELKALEVAARTSILTGCPILVHTQLGTMALEVAKHLIGFGANPDKIQISHLNKNPDKYYYEKVIKETGVTLCFDGPDR 244 (363) T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEETTCSHHHHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEECCTTC T ss_pred HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCC T ss_conf 67899999999999972984899842654220012445533885322343312531013789999996496683463345 Q ss_pred --H----HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC------CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH Q ss_conf --1----33322333321056671798307866787776887------58824499999999987289989999999999 Q gi|254780215|r 182 --F----PKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGK------RNEPAYVVNTAKALAKEKDVSYEDLMEETTKN 249 (262) Q Consensus 182 --~----~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~------~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N 249 (262) + .+...+++.++.-..+++.+-||+....+....|. .+.+..+....+ +..-.|+|.+++.+.++.| T Consensus 245 ~~~~~~~~~~~~~~~~~~~g~~~~i~~~~d~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~-~~~~~Gls~~~al~~~T~N 323 (363) T 3ovg_A 245 VKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGLAYLFDRFLP-LLKQVGVSKEAIFDILVNN 323 (363) T ss_dssp TTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCTHHHHHTHHH-HHHHHTCCHHHHHHHHTHH T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHCCCCHHHHHHHHHHH T ss_conf 765202456779999998099766998889741011225543156676778889999999-9998699999999999999 Q ss_pred HHHHHH Q ss_conf 999842 Q gi|254780215|r 250 ALKLFS 255 (262) Q Consensus 250 ~~~~f~ 255 (262) --|+|| T Consensus 324 PAr~lg 329 (363) T 3ovg_A 324 PKRVLA 329 (363) T ss_dssp HHHHTS T ss_pred HHHHHC T ss_conf 999838 No 29 >3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} Probab=97.53 E-value=0.0065 Score=38.66 Aligned_cols=235 Identities=17% Similarity=0.077 Sum_probs=122.3 Q ss_pred EEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECC------CHHHHHHHHHHHHHCCCCCCCCC-CCCCCCC---CCC Q ss_conf 1686138887565226899999999869989999167------98778999999985572332112-4454433---446 Q gi|254780215|r 2 LIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAI------KVKDFVPLIKLCQDYPSSIFCSV-GTHPCHA---HEE 71 (262) Q Consensus 2 ~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~------~~~~~~~~~~l~~~~p~~i~~a~-GiHP~~~---~~~ 71 (262) |||+|+|+... .....+..+.+...|++.++.... ..+.....++.++..|...+... +.-|... ... T Consensus 91 lID~H~Hie~s--~~~p~~~a~~al~~GvTTvv~dp~~~~nv~g~~gi~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (608) T 3nqb_A 91 LIDTHMHIESS--MITPAAYAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLERGG 168 (608) T ss_dssp EEEEEECGGGG--TSCHHHHHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECCCSSSSTTSCCCS T ss_pred CEEEEECCCCC--CCCHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCC T ss_conf 11301587753--6799999999981893899878875444578999999999764356420203443455554322322 Q ss_pred CHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCC Q ss_conf 78899885310013332100446775533221110246789999876642044203300023335799985310003675 Q gi|254780215|r 72 NEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFP 151 (262) Q Consensus 72 ~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~ 151 (262) .....+.+..+...+.+.+.+|..- +.. ... ........+..|...++++..|........+.... ... . T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~e~~~---~~~-~~~-~~~~~~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~---~~g--~ 238 (608) T 3nqb_A 169 ADFDAAILADLLSWPEIGGIAEIMN---MRG-VIE-RDPRMSGIVQAGLAAEKLVCGHARGLKNADLNAFM---AAG--V 238 (608) T ss_dssp CCCCHHHHHHHHTSTTEEEEEEECC---HHH-HHT-TCHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHH---HTT--C T ss_pred CCCCHHHHHHHHHCCCCCCCCHHCC---CCH-HHH-HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH---HCC--C T ss_conf 2256788877651222232101103---301-111-06788899999985387113310112234667776---066--1 Q ss_pred CCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 331121464023443210352020233221133322333321-0566717983078667877768875882449999999 Q gi|254780215|r 152 FVIHCFSSSQKLADICLELGGYISFTGMITFPKYDALRAIAR-GIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKA 230 (262) Q Consensus 152 ~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~-~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~ 230 (262) ...|+.. +.+.+...+..|.+..+.+............+.+ ...-.++.+-||.-. |.... .-..+....+ T Consensus 239 ~~~h~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~TDd~~--~~~~~----~~g~~~~~~~- 310 (608) T 3nqb_A 239 SSDHELV-SGEDLMAKLRAGLTIELRGSHDHLLPEFVAALNTLGHLPQTVTLCTDDVF--PDDLL----QGGGLDDVVR- 310 (608) T ss_dssp CEECCCC-SHHHHHHHHHTTCEEEEESSSGGGHHHHHHHHHHHTSCCTTEEEECBSCC--HHHHH----HTCSHHHHHH- T ss_pred EEEEECC-CHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC--CCCCC----CCCHHHHHHH- T ss_conf 2333136-67999998634771011375155557778999998656970899678878--77520----0138999999- Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99872899899999999999998425 Q gi|254780215|r 231 LAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 231 iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) .+.-.+++.++..+..+.|.-+.||. T Consensus 311 ~a~~~Gl~~~~Ai~~aT~npA~~lGl 336 (608) T 3nqb_A 311 RLVRYGLKPEWALRAATLNAAQRLGR 336 (608) T ss_dssp HHHHTTCCHHHHHHHHTHHHHHHHTC T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 99984999999999860799998299 No 30 >2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} Probab=97.47 E-value=0.0063 Score=38.72 Aligned_cols=239 Identities=16% Similarity=0.099 Sum_probs=115.8 Q ss_pred EEEEECCCCCHHH--HCCHHHHHHHHHHCCCCEEEEECCCHHH-----HHHHHHH--HHHCCCCCCCCCCC--CCCCCCC Q ss_conf 1686138887565--2268999999998699899991679877-----8999999--98557233211244--5443344 Q gi|254780215|r 2 LIDTHCHLLLPDF--DEDRHDVIMRAHQANVLKMIAIAIKVKD-----FVPLIKL--CQDYPSSIFCSVGT--HPCHAHE 70 (262) Q Consensus 2 ~iD~H~HL~~~~~--~~d~~~~i~~a~~~gv~~~i~~~~~~~~-----~~~~~~l--~~~~p~~i~~a~Gi--HP~~~~~ 70 (262) |||+|+|+....+ .++.....+.+...|+..++..+..... ......+ ............|. ++..... T Consensus 63 fID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (386) T 2vun_A 63 LLDTHVHVSGGDYAPRQKTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNARPAGVKVHGGAVIL 142 (386) T ss_dssp EEEEEECCCSTTEEGGGTEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCCGGGCEEECCEECC T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC T ss_conf 44001687777876113489999999857956998145566652257899888988752135432123344556554445 Q ss_pred CCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH------HHHHHHHHHH Q ss_conf 6788998853100133321004467755332211102467899998766420442033000233------3579998531 Q gi|254780215|r 71 ENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSAD------DDMAAILQEE 144 (262) Q Consensus 71 ~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~------~~~l~iL~~~ 144 (262) ..+...+.+.... ......+++.+... ... ..-....++.+.+.++++..|+.... ......+... T Consensus 143 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ 214 (386) T 2vun_A 143 EKGLTEEDFIEMK-KEGVWIVGEVGLGT---IKN----PEDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTVTADDVIKTK 214 (386) T ss_dssp CTTCCHHHHHHHH-HTTCCEEEEETSSS---CCS----HHHHHHHHHHHHHTTCEEEEECSCCSCSTTCSCCHHHHHHHC T ss_pred CCHHHHHHHHHHH-HHHCCCCCCCCCCC---CCC----HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHC T ss_conf 3024589999876-53000001245432---367----789999999988549858987426310003567788787512 Q ss_pred HHCCCCCCCCEECCCCHHHHHHHHCCC-CEEECCCCCCHH-HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHH Q ss_conf 000367533112146402344321035-202023322113-332233332105667179830786678777688758824 Q gi|254780215|r 145 MKKGPFPFVIHCFSSSQKLADICLELG-GYISFTGMITFP-KYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPA 222 (262) Q Consensus 145 ~~~~~~~~i~H~FsG~~~~~~~~l~~g-~y~S~~g~i~~~-~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~ 222 (262) ......+..|+-.-..+....+++.+ ....+.+..... .....+.........++.+-||++...+ +.|. T Consensus 215 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~~ 286 (386) T 2vun_A 215 -PDVVSHINGGPTAISVQEVDRIMDETDFAMEIVQCGNPKIADYVARRAAEKGQLGRVIFGNDAPSGTG-------LIPL 286 (386) T ss_dssp -CSEEETTTCSSSCCCHHHHHHHHHHCCCEEEEESSSCHHHHHHHHHHHHHHTCGGGEEEECCBSBTTB-------BCTT T ss_pred -CCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHCHHHHHHHHHHHCCCCEEEEECCCCCC-------CCCC T ss_conf -42113053022134288899998617726752145662330000179997430233112000267867-------6861 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 4999999999872899899999999999998425 Q gi|254780215|r 223 YVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 223 ~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ........++...+++.+++.+.++.|.-++||. T Consensus 287 ~~~~~~~~~~~~~gl~~~~al~~~T~n~A~~lgl 320 (386) T 2vun_A 287 GILRNMCQIASMSDIDPEVAVCMATGNSTAVYGL 320 (386) T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHTHHHHHHHTC T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 5899999999870999999999997999999499 No 31 >2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa} Probab=97.41 E-value=0.0089 Score=37.73 Aligned_cols=242 Identities=13% Similarity=0.085 Sum_probs=124.4 Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHH-------HHHHHHHHCCCCCCCC------------- Q ss_conf 91686138887565226899999999869989999167987789-------9999998557233211------------- Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVKDFV-------PLIKLCQDYPSSIFCS------------- 60 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~-------~~~~l~~~~p~~i~~a------------- 60 (262) +.||+|++.. +. .++.+++++.|+..+...-...+++. ....+.+++|+.+..+ T Consensus 11 iviD~l~~~~---~~---r~~~~~~~~gGv~a~~~tv~~~e~~~~~l~~i~~~~~~i~~~~d~~~~~~s~~Di~~a~~~g 84 (325) T 2i5g_A 11 IVIDGLIIAK---WN---RELFEDMRKGGLTAANCTVSVWEGFQATVNNITASNKLIRDNSDLVIPVRSTADIRKAKEQG 84 (325) T ss_dssp CCEEEEECCC---CS---HHHHHHHHHTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHHTTTTEEECSSHHHHHHHHHTT T ss_pred EEEECCCCCC---CC---HHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCC T ss_conf 8870354478---89---89999998619987999876454799999999999999997888099979999999999769 Q ss_pred ---CCCCCCCCCC--CCHHHHHHHHHHCCCCCCCEECCCCCCCCCCC----C--CCHHHHHHHHHH-HHHHHHCCCCCEE Q ss_conf ---2445443344--67889988531001333210044677553322----1--110246789999-8766420442033 Q gi|254780215|r 61 ---VGTHPCHAHE--ENEVLVDELVCLASHPRVVAIGETGLDRYHNA----H--TIEEQKVVFLRH-IEASRITGIPLVI 128 (262) Q Consensus 61 ---~GiHP~~~~~--~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~----~--~~e~Q~~vF~~q-l~lA~e~~~pv~i 128 (262) +=++-..++. ..-+.++.+..+ ++-=++|-|+... . ....-..-|-++ ++-..+++..|=+ T Consensus 85 k~a~~l~~Eg~~~l~~dl~~l~~~y~l-------GvR~~~LT~n~~N~~g~g~~~~~~GLT~fG~~vV~emn~lGmiiDl 157 (325) T 2i5g_A 85 KTGILYGFQNAHAFEDQIGYVEVFKQL-------GVGIVQMCYNTQNLVGTGCYERDGGLSGFGREIVAEMNRVGIMCDL 157 (325) T ss_dssp CEEEEEEESCGGGGTTCTHHHHHHHHT-------TEEEEESCCSSBCSSCBBTTSCCCCCCHHHHHHHHHHHHHTCEEEC T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHC-------CCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEC T ss_conf 989998067830116878999999973-------7608983048999877788678999766679999999975938985 Q ss_pred -EC-HHHHHHHHHHHHH--HHHCCCCCC-CCEECCCCHHHHHHHHCCCCEEECCCCCCHHH----------HHHHHHHHH Q ss_conf -00-0233357999853--100036753-31121464023443210352020233221133----------322333321 Q gi|254780215|r 129 -HS-RSADDDMAAILQE--EMKKGPFPF-VIHCFSSSQKLADICLELGGYISFTGMITFPK----------YDALRAIAR 193 (262) Q Consensus 129 -H~-r~a~~~~l~iL~~--~~~~~~~~~-i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~----------~~~~~e~v~ 193 (262) |+ -++..+++++-+. ...+...+. .=|.=+=+-++++.+.+.|-.++++...-|-+ .+.+.-+++ T Consensus 158 SH~s~~t~~d~i~~S~~Pvi~SHS~~ral~~h~RNl~De~lraia~~GGvIGi~~~~~~l~~~~~~t~~~~~~hi~~~~~ 237 (325) T 2i5g_A 158 SHVGSKTSEEVILESKKPVCYSHCLPSGLKEHPRNKSDEELKFIADHGGFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMN 237 (325) T ss_dssp TTBCHHHHHHHHHHCSSCCEEEEECBTTTCCCTTSBCHHHHHHHHHTTCEEEECCCGGGSSSGGGCBHHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHCCCCCCCHHHHHHHHHHHHH T ss_conf 88988999999841269768861353135677788989999999984986845147104338864449999999999997 Q ss_pred CCCCCCEEEEECCCCC-----------------------CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 0566717983078667-----------------------87776887588244999999999872899899999999999 Q gi|254780215|r 194 GIPMDRVLVETDSPYI-----------------------VPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNA 250 (262) Q Consensus 194 ~iPldriLlETDsP~l-----------------------~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~ 250 (262) .+..|.+=+=||-..- .+.. -...+.|+.++.+.+.+.+ +|.+.+++.++...|+ T Consensus 238 l~G~dhVgiGsDfd~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-p~gl~~~~~~~~l~~~L~~-rG~se~~I~ki~GgN~ 315 (325) T 2i5g_A 238 IVGEDAIGIGTDFTQGHGHDFFEWLTHDKGYARRLTNFGKIVN-PLGIRTVGEFPNLTETLLK-RGMPERVVRKVMGENW 315 (325) T ss_dssp HHCTTSEEECCCBCTTCCHHHHHHHHBGGGTSSBCCCCCSCCC-CBTCSSGGGTHHHHHHHHH-TTCCHHHHHHHHTHHH T ss_pred HCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHH T ss_conf 5485115765643334564203330467774444567898889-8777897788999999998-6989999999998999 Q ss_pred HHHHHHH Q ss_conf 9984256 Q gi|254780215|r 251 LKLFSKI 257 (262) Q Consensus 251 ~~~f~~~ 257 (262) .|+|.++ T Consensus 316 lRv~~eV 322 (325) T 2i5g_A 316 VRVLRDV 322 (325) T ss_dssp HHHHHHH T ss_pred HHHHHHH T ss_conf 9999998 No 32 >1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A Probab=97.40 E-value=0.0069 Score=38.48 Aligned_cols=139 Identities=12% Similarity=0.149 Sum_probs=79.3 Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHH---HHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHH Q ss_conf 6789999876642044203300023335---7999853100036753311214640234432103520202332211333 Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSADDD---MAAILQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFPKY 185 (262) Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a~~~---~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~ 185 (262) .+...+-.++|++++.++.+|+.....+ ....+.. ..........|+..-+.+.+..+.+.|..+..++....... T Consensus 180 ~~~~~~~~~~a~~~~~~~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (406) T 1p1m_A 180 EEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNI-GLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLG 258 (406) T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHHTT-TTTTSCEEEEECTTCCGGGTTTTTTSSEEEEECHHHHHHTT T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHC-CCCCCCEEEEEEECCCHHHHHHHHCCCCEEEECCCHHHHHH T ss_conf 99999999999975996554114560666666777641-77776124444521538999875405833541502566642 Q ss_pred H---HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHH Q ss_conf 2---233332105667179830786678777688758824499999999987---2899899999999999998425 Q gi|254780215|r 186 D---ALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKE---KDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 186 ~---~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i---~~~~~eei~~~~~~N~~~~f~~ 256 (262) . ...... ..-.++.+-||.....+.+ .+..-...+..+.+. .+++.+++.+..+.|.-+.||. T Consensus 259 ~~~~~~~~~~--~~g~~~~~~~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~lGl 327 (406) T 1p1m_A 259 NGIAPVQRMI--EHGMKVTLGTDGAASNNSL------NLFFEMRLASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGF 327 (406) T ss_dssp CCCCCHHHHH--HTTCEEEECCCCTTTTSCC------CHHHHHHHHHHHHHTTCTTSSCHHHHHHHHTHHHHHHHTC T ss_pred CCCCCHHHHH--HCCCCEEECCCCCCCCCCH------HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 4667599998--5798467514446777640------4679999999986422334455999999987539998299 No 33 >2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A Probab=96.88 E-value=0.03 Score=34.27 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=26.6 Q ss_pred EEEEECCCCCH-HHHCCHHHHHHHHHHCCCCEEEEE Q ss_conf 16861388875-652268999999998699899991 Q gi|254780215|r 2 LIDTHCHLLLP-DFDEDRHDVIMRAHQANVLKMIAI 36 (262) Q Consensus 2 ~iD~H~HL~~~-~~~~d~~~~i~~a~~~gv~~~i~~ 36 (262) |||-|||-... +-....++++++|.+.|+..+.++ T Consensus 1 ~iDlH~HT~~S~DG~~~~ee~v~~A~~~Gl~~iaiT 36 (267) T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAYLEEARAKGLKGVVFT 36 (267) T ss_dssp CEEEEECCGGGSSCCSCHHHHHHHHHHTTCSEEEEE T ss_pred CEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE T ss_conf 974334789889857659999999998599999996 No 34 >1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease beta-lactamase, cilastatin, complex (hydrolase/inhibitor); HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A* Probab=96.20 E-value=0.067 Score=31.91 Aligned_cols=141 Identities=9% Similarity=0.070 Sum_probs=91.6 Q ss_pred HHHHHHCCCCCEE-EC-HHHHHHHHHHHHH--HHHCCCCCCC-CEECCCCHHHHHHHHCCCCEEECCCCCCHHH------ Q ss_conf 8766420442033-00-0233357999853--1000367533-1121464023443210352020233221133------ Q gi|254780215|r 116 IEASRITGIPLVI-HS-RSADDDMAAILQE--EMKKGPFPFV-IHCFSSSQKLADICLELGGYISFTGMITFPK------ 184 (262) Q Consensus 116 l~lA~e~~~pv~i-H~-r~a~~~~l~iL~~--~~~~~~~~~i-~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~------ 184 (262) ++-..+++..|=+ |+ .++..+++++-+. ...+...+.+ =|.=+=+-++++.+.+.|--++++..-.|-+ T Consensus 184 V~emn~lGmiIDvSH~s~~~~~dvl~~s~~PvIaSHSn~ral~~h~RNltDe~iraIa~~GGvIGi~~~~~fl~~~~~~~ 263 (369) T 1itu_A 184 VKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCTNKAN 263 (369) T ss_dssp HHHHHHHTCEEECTTBCHHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHHHHHHHTCEEEECCCHHHHTSSSCCB T ss_pred HHHHHHCCCEEECCCCCHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCHH T ss_conf 99997529365547687899999974158983663304465415667998899999996499576505611115753005 Q ss_pred ----HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf ----322333321056671798307866787776887588244999999999872899899999999999998425687 Q gi|254780215|r 185 ----YDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKISE 259 (262) Q Consensus 185 ----~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~~~ 259 (262) .+.+.-+++.+..|.+=+=||--.....| + ..+.++.++.+++.+.+ +|.+.+++.++...|++|+|.++.+ T Consensus 264 ~~~~~~Hi~yi~~l~G~dhVgiGsDfDg~~~~p-~-gl~~~~~~p~l~~~L~~-rGys~~~I~ki~g~N~lRv~~~V~~ 339 (369) T 1itu_A 264 LSQVADHLDHIKEVAGARAVGFGGDFDGVPRVP-E-GLEDVSKYPDLIAELLR-RNWTEAEVKGALADNLLRVFEAVEQ 339 (369) T ss_dssp HHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCC-B-TCSSTTCHHHHHHHHHH-TTCCHHHHHHHHTHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-C-CCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999862964278776778999998-8-87787788999999998-6999999999998889999999999 No 35 >2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16 Probab=95.50 E-value=0.15 Score=29.52 Aligned_cols=95 Identities=13% Similarity=0.006 Sum_probs=52.1 Q ss_pred CCCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHH---HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 53311214640234432103520202332211333---223333210566717983078667877768875882449999 Q gi|254780215|r 151 PFVIHCFSSSQKLADICLELGGYISFTGMITFPKY---DALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNT 227 (262) Q Consensus 151 ~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~---~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~ 227 (262) ..+.|+..-..+....+...|.............. ..++++.+. . -++.+=||+|-..+ ..++... T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-G-v~v~lGtD~~~~~~---------~~~~~~e 367 (420) T 2imr_A 299 PTLVHMVNVTPDDIARVARAGCAVVTCPRSNHHLECGTFDWPAFAAA-G-VEVALGTDSVASGE---------TLNVREE 367 (420) T ss_dssp CEEEECCSCCHHHHHHHHHHTCCEEECHHHHHHTTCCCCCHHHHHHT-T-CCEEECCCCHHHHS---------CSCTHHH T ss_pred CCCCCCCCCCHHHHHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHC-C-CEEEEECCCCCCCC---------CCCHHHH T ss_conf 22212333657899999861983454640454422676109999988-9-90999768986688---------7379999 Q ss_pred HHHHHH-HHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 999998-72899899999999999998425 Q gi|254780215|r 228 AKALAK-EKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 228 ~~~iA~-i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ++..+. -.+++.++..+..+.|.-+++|. T Consensus 368 ~~~a~~~~~gls~~eal~~aT~n~A~~lGl 397 (420) T 2imr_A 368 VTFARQLYPGLDPRVLVRAAVKGGQRVVGG 397 (420) T ss_dssp HHHHHHHCTTSCHHHHHHHHHHHHHHHHC- T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 999999847999999999999999999588 No 36 >2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A* Probab=95.20 E-value=0.19 Score=28.90 Aligned_cols=237 Identities=14% Similarity=0.137 Sum_probs=101.2 Q ss_pred EEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEEC-CC-----HHHHHHHHHH-HHHCCCCC--CCCCCCCCCCCCCCCH Q ss_conf 68613888756522689999999986998999916-79-----8778999999-98557233--2112445443344678 Q gi|254780215|r 3 IDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIA-IK-----VKDFVPLIKL-CQDYPSSI--FCSVGTHPCHAHEENE 73 (262) Q Consensus 3 iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~-~~-----~~~~~~~~~l-~~~~p~~i--~~a~GiHP~~~~~~~~ 73 (262) .|+|+|+-...+ .... ..|...|+..++.+- |+ ++......+. .+.-+..+ +..+|+..... ... T Consensus 13 ~D~HvH~Reg~~---~~~t-~aa~~gG~t~v~~MPNT~Pp~~t~e~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~ 86 (347) T 2z26_A 13 DDWHLHLRDGDM---LKTV-VPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDS--LDP 86 (347) T ss_dssp CEEEECCCSHHH---HHHH-HHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEEEEEECCTT--CCH T ss_pred CCCEEECCCCCH---HHHH-HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC--CCH T ss_conf 831376579822---7689-9998364899998999989889999999999999984626872798888984587--777 Q ss_pred HHHHHHHHHCCCCCCCEECCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHH---------HHHHHHHHHHH Q ss_conf 899885310013332100446775-53322111024678999987664204420330002---------33357999853 Q gi|254780215|r 74 VLVDELVCLASHPRVVAIGETGLD-RYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRS---------ADDDMAAILQE 143 (262) Q Consensus 74 ~~~~~l~~l~~~~~~~aIGEiGLD-~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~---------a~~~~l~iL~~ 143 (262) ..+. .........++..-+-+ +........ ....+..-++.+...++++..|+.. ++.+....... T Consensus 87 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~h~e~~~~~~~~~~~eae~~~~~~~ 162 (347) T 2z26_A 87 NELE---RGFNEGVFTAAKLYPANATANSSHGVT-SVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVME 162 (347) T ss_dssp HHHH---HHHHTTSEEEEEECCCCTTCCTTTCCS-CGGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHH T ss_pred HHHH---HHHHHHHHHHHHHCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHH T ss_conf 7787---776411255676546643036763102-469999999999981971200575556677865327888888776 Q ss_pred --HHHCCCCCCCC-EECCCCHHHHHHHHCCCCEEE-------------------------CCCCCCHHHHHHH-HHHHHC Q ss_conf --10003675331-121464023443210352020-------------------------2332211333223-333210 Q gi|254780215|r 144 --EMKKGPFPFVI-HCFSSSQKLADICLELGGYIS-------------------------FTGMITFPKYDAL-RAIARG 194 (262) Q Consensus 144 --~~~~~~~~~i~-H~FsG~~~~~~~~l~~g~y~S-------------------------~~g~i~~~~~~~~-~e~v~~ 194 (262) .......++++ |. .+.+.++.+.+.|..++ ++|.+ |.++- +++++. T Consensus 163 ~~~a~~~~~~vHi~hi--St~~~v~~~k~~g~~vt~EvtPhhL~l~~~d~~~~~~~~~~kvnPPL---R~~~dr~aL~~~ 237 (347) T 2z26_A 163 PLRQRLTALKVVFEHI--TTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRPHLYCLPIL---KRNIHQQALREL 237 (347) T ss_dssp HHHHHSTTCCEEECSC--CSHHHHHHHHTSCTTEEEEECHHHHHCCHHHHHTTSBCGGGCCSSCC---CCHHHHHHHHHH T ss_pred HHHCCCCCEEEEEEEC--CHHHHHHHHHHCCCCCEEEEECCCHHCCHHHHHCCCCCCCEEEECCC---CCHHHHHHHHHH T ss_conf 5423377338999505--50678999874388702575054154578888446987653884898---988899999998 Q ss_pred CCCCC--EEEEECCCCCCC------CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 56671--798307866787------776887588244999999999872899899999999999998425 Q gi|254780215|r 195 IPMDR--VLVETDSPYIVP------VSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 195 iPldr--iLlETDsP~l~p------~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) +=.+- ..+=||.|.-+. .+.-|-.+-+..++..+...- ...+++.+.+.+..|-.|+||- T Consensus 238 ~~~g~i~~iiatDHAPh~~~kk~~~~~~~g~~g~e~~l~ll~~~~~--~~~sL~~lv~~~S~nPAkifGL 305 (347) T 2z26_A 238 VASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFE--EMNALQHFEAFCSVNGPQFYGL 305 (347) T ss_dssp HHTTCTTEEECCCBCCCCHHHHSSSSBCCCCCCTTTHHHHHHHHHH--HTTCGGGHHHHHHTHHHHHHTC T ss_pred HHCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHCC T ss_conf 7569962898479997857732044224435665779999999997--2598999999997739999498 No 37 >3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa} Probab=95.16 E-value=0.2 Score=28.82 Aligned_cols=66 Identities=14% Similarity=0.142 Sum_probs=49.5 Q ss_pred HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 3321056671798307866787776887588244999999999872899899999999999998425687 Q gi|254780215|r 190 AIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKISE 259 (262) Q Consensus 190 e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~~~ 259 (262) -+++.+..|.+=+=||- -.+.... ..+.++.++.+.+.+.+ +|.+.+++.++...|++|+|..+.+ T Consensus 344 ~i~~l~G~dhVgiGsDf--DG~~~~~-gl~d~s~~p~l~~~L~~-rGyse~~I~kI~ggN~lRvl~eV~~ 409 (417) T 3b40_A 344 YTVKKVGIDHVGISSDF--NDGGGVD-GWKDVSEIRNVTAELIT-RGYSDADIAKLWGGNFLRAWGEVQK 409 (417) T ss_dssp HHHHHHCGGGEEEECCB--TTTCCBB-TBCSGGGHHHHHHHHHH-HTCCHHHHHHHTTHHHHHHHHHHHH T ss_pred HHHHHCCCCCEEECCCC--CCCCCCC-CCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99997289844757668--9998887-76798889999999998-7989999999987889999999999 No 38 >3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A Probab=94.99 E-value=0.22 Score=28.50 Aligned_cols=138 Identities=12% Similarity=0.063 Sum_probs=84.6 Q ss_pred HHHHHHCCCCCEE-EC-HHHHHHHHHHHHHH--HHCCCCCC-CCEECCCCHHHHHHHHCCCCEEECCCCCCHHH------ Q ss_conf 8766420442033-00-02333579998531--00036753-31121464023443210352020233221133------ Q gi|254780215|r 116 IEASRITGIPLVI-HS-RSADDDMAAILQEE--MKKGPFPF-VIHCFSSSQKLADICLELGGYISFTGMITFPK------ 184 (262) Q Consensus 116 l~lA~e~~~pv~i-H~-r~a~~~~l~iL~~~--~~~~~~~~-i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~------ 184 (262) ++-..+++..|=+ |+ .++..+++++-+.- ..+...+. .=|.=+=+-++++.+.+.|--++++....|-+ T Consensus 198 v~~mn~lGmiiDvSH~s~~~~~dv~~~s~~PviaSHsn~ral~~h~RNl~D~~i~aia~~gGvIGi~~~~~fl~~~~~~~ 277 (364) T 3ly0_A 198 VAECNRLKIMLDLSHLNEKGFDDVARLSDAPLVATHSNAHAVTPSTRNLTDRQLAMIRESRGMVGLNFATSFLREDGRRS 277 (364) T ss_dssp HHHHHHHTCEEBCTTBCHHHHHHHHHHCSSCCEETTCCBTTTSCCTTSBCHHHHHHHHHTTCEEEECCCHHHHSTTCCCC T ss_pred HHHHHHCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCC T ss_conf 99998648066648787889999986168998996767463088878798899999997399899834626036898676 Q ss_pred --------HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf --------322333321056671798307866787776887588244999999999872899899999999999998425 Q gi|254780215|r 185 --------YDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 185 --------~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) .+.+.-+++.+..|.+-+=||-=- .+.| .....++.++.+++.+.+ +|.+.+++.++.+.|+.|||.+ T Consensus 278 ~~~~~~~~~~Hi~~~~~l~G~dhVgiGsDfdG-~~~p--~gl~~~~~~p~l~~~L~~-rG~se~~i~ki~g~N~lRv~~~ 353 (364) T 3ly0_A 278 AEMGWEPVLRHLDHLIDRLGEDHVGMGSDFDG-ATIP--QGIADVTGLPALQAAMRA-HGYDEPLMRKLCHENWYGLLER 353 (364) T ss_dssp SCCCSHHHHHHHHHHHHHHCTTSEEECCCBTT-SCCC--TTTCSGGGHHHHHHHHHH-HTCCHHHHHHHHTHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEECCCCCC-CCCC--CCCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHH T ss_conf 55799999999999999709881898436899-9898--877787779999999998-6989999999999999999999 Q ss_pred H Q ss_conf 6 Q gi|254780215|r 257 I 257 (262) Q Consensus 257 ~ 257 (262) + T Consensus 354 v 354 (364) T 3ly0_A 354 T 354 (364) T ss_dssp H T ss_pred H T ss_conf 9 No 39 >1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, zinc, metallo- enzyme, structure 2 function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A Probab=94.90 E-value=0.095 Score=30.89 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=26.7 Q ss_pred EEEEECCCCCH-HHHCCHHHHHHHHHHCCCCEEEEEC Q ss_conf 16861388875-6522689999999986998999916 Q gi|254780215|r 2 LIDTHCHLLLP-DFDEDRHDVIMRAHQANVLKMIAIA 37 (262) Q Consensus 2 ~iD~H~HL~~~-~~~~d~~~~i~~a~~~gv~~~i~~~ 37 (262) .||-|||-... +-....++++++|.+.|+..+..+- T Consensus 3 ~iDlH~HT~~S~dg~~~~~e~v~~A~~~G~~~iaiTD 39 (245) T 1m65_A 3 PVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITD 39 (245) T ss_dssp CEECCBCCTTSTTCCCCHHHHHHHHHHHTCCEEEEEE T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC T ss_conf 6152338798898668599999999987999999808 No 40 >2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrolase, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens str} Probab=94.21 E-value=0.16 Score=29.40 Aligned_cols=138 Identities=15% Similarity=0.143 Sum_probs=66.4 Q ss_pred HHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHH--------HHH---HHCCCCEEEC Q ss_conf 46789999876642044203300023335799985310003675331121464023--------443---2103520202 Q gi|254780215|r 108 QKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSSQKL--------ADI---CLELGGYISF 176 (262) Q Consensus 108 Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~~~~--------~~~---~l~~g~y~S~ 176 (262) ....++...+.|.+.+.++.+|........-++.... ... ....|+|.+.... ... ....+..... T Consensus 187 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (417) T 2ogj_A 187 GVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEIL-GPG--DVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDI 263 (417) T ss_dssp TTHHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHHC-CTT--CEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEEC T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH-HCC--CCCEEEECCCCCHHHHCCHHHHHHHHHHHHCCCCHHH T ss_conf 4689999999999839976875036527899999986-324--4202431345403332110368888764321320001 Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 33221133322333321056671798307866787776887588244999999999872899899999999999998425 Q gi|254780215|r 177 TGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 177 ~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ............+..+. -......+-||.....+. +.. ..+...+..+. -.+++.+++.+.++.|.-++||. T Consensus 264 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~d~~~~~~~---~~~---~~l~~~~~~~~-~~g~s~~eal~~~T~~~A~~lGl 335 (417) T 2ogj_A 264 GHGGASFSFKVAEAAIA-RGLLPFSISTDLHGHSMN---FPV---WDLATTMSKLL-SVDMPFENVVEAVTRNPASVIRL 335 (417) T ss_dssp CBCSSSCCHHHHHHHHH-TTCCCSBCCBCBSTTTTT---TTC---CCHHHHHHHHH-HTTCCHHHHHHTTTHHHHHHTTC T ss_pred CCCCCCCCHHHHHHHHH-CCCCCCEEEECCCCCCCC---CCH---HHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHCCC T ss_conf 02653212489999998-189872366536767877---650---15999999999-83999999999998999998199 No 41 >3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A Probab=94.17 E-value=0.33 Score=27.26 Aligned_cols=139 Identities=12% Similarity=-0.003 Sum_probs=83.3 Q ss_pred HHHHHHHCCCCCEE-EC-HHHHHHHHHHHHHH-HHCCCCC-CCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHH----- Q ss_conf 98766420442033-00-02333579998531-0003675-3311214640234432103520202332211333----- Q gi|254780215|r 115 HIEASRITGIPLVI-HS-RSADDDMAAILQEE-MKKGPFP-FVIHCFSSSQKLADICLELGGYISFTGMITFPKY----- 185 (262) Q Consensus 115 ql~lA~e~~~pv~i-H~-r~a~~~~l~iL~~~-~~~~~~~-~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~----- 185 (262) -++-..+++..|=+ |+ .++..+++++=+.. ..+...+ ..-|.=+=+-++++.+.+.|-.++++..-.|-+. T Consensus 159 ~V~emn~lGmiiDlSH~s~~~~~d~~~~s~PviaSHSn~r~l~~h~RNl~De~i~aia~~GGviG~~~~~~fl~~~~~~~ 238 (318) T 3neh_A 159 IIHLLNERKVFTDVSHLSVKAFWETLEQAEFVIASHSNAKAICSHPRNLDDEQIKAMIEHDAMIHVVFYPLFTTNNGVAD 238 (318) T ss_dssp HHHHHHHHTCEEECTTBCHHHHHHHHHHCSSEEESSCCBTTTSCCTTSBCHHHHHHHHHTTCEEEECCCHHHHCTTSCCB T ss_pred HHHHHHHCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHCCCCCCCC T ss_conf 99999865848875878788899999750655762246231178889997899999998398899980544318986541 Q ss_pred -----HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH Q ss_conf -----223333210566717983078667877768875882449999999998728998999999999999984256 Q gi|254780215|r 186 -----DALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKI 257 (262) Q Consensus 186 -----~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~ 257 (262) +.+.-++..+..|.+-+=||--- .|.... ..+.++.++.+++.+ + +|.+.+++.++...|+.|||-|- T Consensus 239 ~~d~~~Hi~y~~~l~G~dhVgiGsDfdG-~~~~~~-g~~~~~~~~~l~e~L-~-rg~se~~i~ki~g~N~lRvl~~~ 311 (318) T 3neh_A 239 TEDVIRHIDHICELGGLKNIGFGSDFDG-IPDHVK-GLEHVGKYQSFLETL-E-KHYTKEEIEGFASRNFLNHLPKE 311 (318) T ss_dssp HHHHHHHHHHHHHTTCGGGEEECCCBTS-CSSCBB-TBSSGGGHHHHHHHH-T-TTSCHHHHHHHHTHHHHHTCCC- T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCC-CCCCCC-CCCCHHHHHHHHHHH-H-CCCCHHHHHHHHHHHHHHHHHHC T ss_conf 5568999999999729882898855689-999965-623788899999999-8-28999999999989999999864 No 42 >2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A Probab=93.47 E-value=0.45 Score=26.43 Aligned_cols=85 Identities=9% Similarity=0.048 Sum_probs=45.0 Q ss_pred CHHHHHHHHCCCCEEECCC--CCC------H-HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 4023443210352020233--221------1-333223333210566717983078667877768875882449999999 Q gi|254780215|r 160 SQKLADICLELGGYISFTG--MIT------F-PKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKA 230 (262) Q Consensus 160 ~~~~~~~~l~~g~y~S~~g--~i~------~-~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~ 230 (262) ..+.++++.+.|+.+-++. ... + ....+..+.+... --.+.+=|||=...- .+..+...++. T Consensus 150 ~~~~~~~~~~~~~~~ein~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~i~igSDAH~~~~--------~~~~~~~a~~~ 220 (247) T 2wje_A 150 NEKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQYFLEQ-DLVHVIASDMHNLDG--------RPPHMAEAYDL 220 (247) T ss_dssp CHHHHHHHHHTTCEEEEEHHHHSCCCSSCCSCHHHHHHHHHHHHT-TCCSEEECCBCCSSS--------SCCCHHHHHHH T ss_pred CHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC-CCEEEEECCCCCCCC--------CCHHHHHHHHH T ss_conf 688899998689758864244333456777459999999999978-990999858998434--------68169999999 Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 9987289989999999999999842 Q gi|254780215|r 231 LAKEKDVSYEDLMEETTKNALKLFS 255 (262) Q Consensus 231 iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262) +++..| .+++.+...+|.+++.+ T Consensus 221 l~~~~g--~~~~~~~~~~np~~i~~ 243 (247) T 2wje_A 221 VTQKYG--EAKAQELFIDNPRKIVM 243 (247) T ss_dssp HHHHHC--HHHHHHHHTHHHHHHHT T ss_pred HHHHCC--HHHHHHHHHHHHHHHHC T ss_conf 998739--99999999984999977 No 43 >2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 Probab=92.99 E-value=0.35 Score=27.14 Aligned_cols=128 Identities=20% Similarity=0.229 Sum_probs=62.9 Q ss_pred HHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCC------------HHHHHHHHCCCCEEECCCCCCHHHH Q ss_conf 6642044203300023335799985310003675331121464------------0234432103520202332211333 Q gi|254780215|r 118 ASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSS------------QKLADICLELGGYISFTGMITFPKY 185 (262) Q Consensus 118 lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~------------~~~~~~~l~~g~y~S~~g~i~~~~~ 185 (262) .+...+.|..+|+-.......+++... .. .....|.+.+. ...+......|....+......... T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (379) T 2ics_A 177 QQENQEIPLMVHIGSAPPHLDEILALM-EK--GDVLTHCFNGKENGILDQATDKIKDFAWQAYNKGVVFDIGHGTDSFNF 253 (379) T ss_dssp HHTTTTCCEEEEECSSSSCHHHHHHHC-CT--TCEEESTTCCSTTSSEETTTTEECHHHHHHHHTTCEEECCCTTTSCCH T ss_pred HHHHCCCCEEEECCCCCHHHHHHHHHH-HC--CCEEEHHHCCCCCHHHHHCHHHHHHHHHHHHHCCEEEEECCCCCCCCH T ss_conf 997479845763057741489999875-34--653200130554201120114479999987534636520257544467 Q ss_pred HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 223333210566717983078667877768875882-44999999999872899899999999999998425 Q gi|254780215|r 186 DALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEP-AYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 186 ~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P-~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ...++.++. ......+-||.....+ .+.| ..+......+. -.+++.+++.+.++.|.-+++|. T Consensus 254 ~~~~~~~~~-g~~~~~~~~d~~~~~~------~~~~~~~l~~~~~~~~-~~~ls~~eal~~~T~n~A~~lgl 317 (379) T 2ics_A 254 HVAETALRE-GMKAASISTDIYIRNR------ENGPVYDLATTMEKLR-VVGYDWPEIIEKVTKAPAENFHL 317 (379) T ss_dssp HHHHHHHHT-TCCCSBCCCCBCHHHH------HSSSCCCHHHHHHHHH-HHTCCHHHHHHTTTHHHHHHTTC T ss_pred HHHHHHHHC-CCCCEEEECCCCCCCC------CCCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHCC T ss_conf 999999980-8973388536787776------6523667999999998-65999999999999999998099 No 44 >1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8 Probab=92.58 E-value=0.31 Score=27.48 Aligned_cols=132 Identities=11% Similarity=0.053 Sum_probs=69.4 Q ss_pred HHHHHHHHHHHHCCCCCEEEC---HHHH-----------------------HHHHHHHHHHHHCCCCCCCC-EECCCCHH Q ss_conf 789999876642044203300---0233-----------------------35799985310003675331-12146402 Q gi|254780215|r 110 VVFLRHIEASRITGIPLVIHS---RSAD-----------------------DDMAAILQEEMKKGPFPFVI-HCFSSSQK 162 (262) Q Consensus 110 ~vF~~ql~lA~e~~~pv~iH~---r~a~-----------------------~~~l~iL~~~~~~~~~~~i~-H~FsG~~~ 162 (262) .+|....+++.+.++|+.+|. |+.. ..+++.|.+.... .++|+ |. ++. T Consensus 283 ~ll~~l~~~~~e~g~vmQlH~G~~Rn~n~~~~~~~G~d~G~D~~~~~~~~~~~ll~~l~~~~~~--~k~il~~l---~~~ 357 (463) T 1j5s_A 283 FMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAEGLRYFLNEFDGK--LKIVLYVL---DPT 357 (463) T ss_dssp HHHHHHHHHHHHHTCEEEEEECEECSCSHHHHHHTCSSSSCCEECSCCCHHHHHHHHHHHSTTT--SCEEEEES---SGG T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEEEC---CCC T ss_conf 9999999997437952786105675646899998589988778666599999999999837999--85799858---963 Q ss_pred HHHHHH-----------CCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEE-EEECCCCCCCCCCCCCCCCHHHHHH-HHH Q ss_conf 344321-----------035202023322113332233332105667179-8307866787776887588244999-999 Q gi|254780215|r 163 LADICL-----------ELGGYISFTGMITFPKYDALRAIARGIPMDRVL-VETDSPYIVPVSCQGKRNEPAYVVN-TAK 229 (262) Q Consensus 163 ~~~~~l-----------~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriL-lETDsP~l~p~~~r~~~n~P~~i~~-~~~ 229 (262) .-+++. +.||||..++.-. ...++.++...|+.+++ .=|||-.+..-+.|-+ +-.+ .+. T Consensus 358 ~~~ela~lag~f~~v~~g~~WWf~d~~~gm---~~~l~~~~e~~~~s~fvG~~tDsRsfls~~~rhe-----~fRRiL~~ 429 (463) T 1j5s_A 358 HLPTISTIARAFPNVYVGAPWWFNDSPFGM---EMHLKYLASVDLLYNLAGMVTDSRKLLSFGSRTE-----MFRRVLSN 429 (463) T ss_dssp GHHHHHHHHHHCTTEEECCCCSTTCSHHHH---HHHHHHHHTTSCGGGCCCCCCCCSSTTHHHHHHH-----HHHHHHHH T ss_pred CHHHHHHHHHHCCCCEECCHHHHCCCHHHH---HHHHHHHHHHCCCCCEECEECCCCCHHHHHHHHH-----HHHHHHHH T ss_conf 099999998529877123704640879999---9999999985062244011268740211169999-----99999999 Q ss_pred HHHHH---HCCCHH----HHHHHHHHHHHHHH Q ss_conf 99987---289989----99999999999984 Q gi|254780215|r 230 ALAKE---KDVSYE----DLMEETTKNALKLF 254 (262) Q Consensus 230 ~iA~i---~~~~~e----ei~~~~~~N~~~~f 254 (262) .+++. -.++.+ -+..+++.|++++| T Consensus 430 ~L~~~Ve~G~l~~~~a~~i~~~I~y~Na~~~f 461 (463) T 1j5s_A 430 VVGEMVEKGQIPIKEARELVKHVSYDGPKALF 461 (463) T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHH T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHC T ss_conf 99999986998999999999999976889762 No 45 >2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical structural genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A Probab=92.30 E-value=0.62 Score=25.50 Aligned_cols=139 Identities=18% Similarity=0.233 Sum_probs=84.0 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHH-----HHHHHHHHHHHHHCCCCCCCCEECCC--CHHHHHH Q ss_conf 6775533221110246789999876642044203300023-----33579998531000367533112146--4023443 Q gi|254780215|r 94 TGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSA-----DDDMAAILQEEMKKGPFPFVIHCFSS--SQKLADI 166 (262) Q Consensus 94 iGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a-----~~~~l~iL~~~~~~~~~~~i~H~FsG--~~~~~~~ 166 (262) +|+|..-+..+.+ -|....+.|++.++++.+|+=.. .+.+.+.+... ++ .-|=|++.- +.+.++. T Consensus 203 vG~Dl~G~e~~~~----~f~~~f~~ar~~gl~~t~HaGE~~~~~~~~~v~~ai~~l---g~-~RIGHG~~l~~d~~l~~~ 274 (371) T 2pgf_A 203 VGFDHGGHEVDLK----EYKEIFDYVRESGVPLSVHAGEDVTLPNLNTLYSAIQVL---KV-ERIGHGIRVAESQELIDM 274 (371) T ss_dssp EEEEEEESCCCGG----GGHHHHHHHHHTTCCBEEEESCCTTSSSSHHHHHHHHTS---CC-SEEEECGGGGGCHHHHHH T ss_pred EECCCCCCCCCHH----HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHC---CC-CCCCHHHHHHHHHHHHHH T ss_conf 2002456789828----899999999852884255246667888677899998613---86-602048988514689999 Q ss_pred HHCCCCEEECCCCCCHH-------HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH Q ss_conf 21035202023322113-------33223333210566717983078667877768875882449999999998728998 Q gi|254780215|r 167 CLELGGYISFTGMITFP-------KYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSY 239 (262) Q Consensus 167 ~l~~g~y~S~~g~i~~~-------~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~ 239 (262) +.+.|.-+-+.+..... +.--++.+.+. -=.+-+-||-|-+. + .++..-+..+++-.+++. T Consensus 275 l~~~~I~lEvCptSN~~~~~~~~~~~HP~~~l~~~--Gv~v~i~TDDp~~f----~------t~l~~Ey~~~~~~~~l~~ 342 (371) T 2pgf_A 275 VKEKNILLEVCPISNVLLKNAKSMDTHPIRQLYDA--GVKVSVNSDDPGMF----L------TNINDDYEELYTHLNFTL 342 (371) T ss_dssp HHHTTCEEEECHHHHHHTTSSSCGGGCTHHHHHHT--TCEEEECCBCHHHH----T------CCHHHHHHHHHHHHCCCH T ss_pred HHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHC--CCEEEEECCCCHHH----C------CCHHHHHHHHHHHHCCCH T ss_conf 98608548975675630026787535889999988--99399818993432----8------888999999999819599 Q ss_pred HHHHHHHHHHHHHH Q ss_conf 99999999999998 Q gi|254780215|r 240 EDLMEETTKNALKL 253 (262) Q Consensus 240 eei~~~~~~N~~~~ 253 (262) +++. ++.+|+.+. T Consensus 343 ~el~-~l~~nai~~ 355 (371) T 2pgf_A 343 EDFM-KMNEWALEK 355 (371) T ss_dssp HHHH-HHHHHHHHH T ss_pred HHHH-HHHHHHHHH T ss_conf 9999-999999998 No 46 >3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3itc_A* 3k5x_A* Probab=91.93 E-value=0.71 Score=25.08 Aligned_cols=140 Identities=15% Similarity=0.071 Sum_probs=80.0 Q ss_pred HHHHHCCCCCEE-EC-HHHHHHHHHHHHH--HHHCCCCCC-CCEECCCCHHHHHHHHCCCCEEECCCCCCHHH------- Q ss_conf 766420442033-00-0233357999853--100036753-31121464023443210352020233221133------- Q gi|254780215|r 117 EASRITGIPLVI-HS-RSADDDMAAILQE--EMKKGPFPF-VIHCFSSSQKLADICLELGGYISFTGMITFPK------- 184 (262) Q Consensus 117 ~lA~e~~~pv~i-H~-r~a~~~~l~iL~~--~~~~~~~~~-i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~------- 184 (262) +-..+++..|=+ |+ .++..+++++-+. ...+...+. .-|.=+-+-++++.+.+.|-.++++..-.|-. T Consensus 178 ~emn~lGmiIDvSH~s~~t~~Dvi~~s~~PvIaSHSn~ral~~h~RNltDeqlraIa~~GGvIGi~~~~~Fl~~~~~~~~ 257 (400) T 3id7_A 178 REMNREGMLVDLSHVAATTMRDALDTSTAPVIFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQAAVDWT 257 (400) T ss_dssp HHHHHHTCEEECTTBCHHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHTTHHHHTCEEEECCCHHHHCHHHHHHH T ss_pred HHHHHHCCEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHCCCCHHHH T ss_conf 99997197634477878899999973489989968686762667789879999999974988999535354225430122 Q ss_pred ------------------------------------------HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHH Q ss_conf ------------------------------------------32233332105667179830786678777688758824 Q gi|254780215|r 185 ------------------------------------------YDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPA 222 (262) Q Consensus 185 ------------------------------------------~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~ 222 (262) .+.+.-+++.+..|.+=+=||-.... .... ..+.++ T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~vdHIdh~~~l~G~dhVgiGsDfdG~~-~~p~-gl~~~~ 335 (400) T 3id7_A 258 AEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRPVATVSTVADHLDHMREVAGVDHLGIGGDYDGTP-FTPD-GLGDVS 335 (400) T ss_dssp HHHHHHHHHTTCCTTCCSHHHHHHHHHHHHHSCCCCCBHHHHHHHHHHHHHHHCGGGEEECCCBTTCS-CCCB-TCSSTT T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCC-CCCC-CCCCHH T ss_conf 22456665430012355577887666677635887888999999999999864886147578889999-9987-668887 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 4999999999872899899999999999998425687 Q gi|254780215|r 223 YVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKISE 259 (262) Q Consensus 223 ~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~~~ 259 (262) .++.+.+.+.+ +|.+.+++.++...|+.|+|.+..+ T Consensus 336 ~~p~l~~~L~~-rGyse~~I~kI~ggN~lRvl~~ve~ 371 (400) T 3id7_A 336 GYPNLIAELLD-RGWSQSDLAKLTWKNAVRVLDAAED 371 (400) T ss_dssp CHHHHHHHHHH-TTCCHHHHHHHHTHHHHHHHHHHHH T ss_pred HHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 89999999998-6999999999961619999999999 No 47 >2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, PSI-2, protein structure initiative; 2.00A {Caulobacter crescentus CB15} Probab=90.97 E-value=0.89 Score=24.45 Aligned_cols=68 Identities=12% Similarity=-0.007 Sum_probs=51.0 Q ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 333321056671798307866787776887588244999999999872899899999999999998425687 Q gi|254780215|r 188 LRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKISE 259 (262) Q Consensus 188 ~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~~~ 259 (262) +.-+++.+..|.+-+=||-.-... .. ..+.++.++.+.+.+.+ +|.+.+++.++...|+.|+|....+ T Consensus 343 i~~~~~l~G~dhVgiGsDfDG~~~--~~-gl~d~~~~p~l~~~L~~-rGyse~~I~kI~GgN~lRV~~~ve~ 410 (417) T 2rag_A 343 MLHVLKVAGPKGVCVGADWDGGGG--MD-GFEDITDLPKITARLKA-EGYSDADIEAIWSGNVLRIVDAAQA 410 (417) T ss_dssp HHHHHHHHCTTSEEECCCTTTTCC--BB-TBSSGGGTHHHHHHHHH-TTCCHHHHHHHHTHHHHHHHHHHHH T ss_pred HHHHHHHCCCCCEEECCCCCCCCC--CC-CCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 999998538881366888799999--87-76898789999999998-7989999999984999999999999 No 48 >3ou8_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.51A {Pseudomonas aeruginosa} Probab=90.89 E-value=0.9 Score=24.39 Aligned_cols=124 Identities=17% Similarity=0.219 Sum_probs=75.3 Q ss_pred HHHHHHHHHHHCCCCCEEECHHH--HHHHHHHHHHHHHCCCCCCCCEECC--CCHHHHHHHHCCCCEEECCCCCCHH--- Q ss_conf 89999876642044203300023--3357999853100036753311214--6402344321035202023322113--- Q gi|254780215|r 111 VFLRHIEASRITGIPLVIHSRSA--DDDMAAILQEEMKKGPFPFVIHCFS--SSQKLADICLELGGYISFTGMITFP--- 183 (262) Q Consensus 111 vF~~ql~lA~e~~~pv~iH~r~a--~~~~l~iL~~~~~~~~~~~i~H~Fs--G~~~~~~~~l~~g~y~S~~g~i~~~--- 183 (262) -|....+.|++.++++.+|+=.. ...+.+.+... + ..-|=|++. -+.+.++.+.+.+.-+-+.++.... T Consensus 178 ~~~~~~~~a~~~gl~~t~HaGE~~~~~~i~~ai~~l---~-a~RIgHG~~~~~d~~l~~~l~~~~I~lEvCptSN~~~~~ 253 (326) T 3ou8_A 178 KFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLL---K-VERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCV 253 (326) T ss_dssp GGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTS---C-CSEEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTS T ss_pred HHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHCC---C-CCCCCCEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCC T ss_conf 999999999985998213676679714378898557---9-861123000043667999999728406977887754576 Q ss_pred ----HHHHHHHHHH-CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf ----3322333321-05667179830786678777688758824499999999987289989999999999999 Q gi|254780215|r 184 ----KYDALRAIAR-GIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALK 252 (262) Q Consensus 184 ----~~~~~~e~v~-~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~ 252 (262) +.--++..++ .+ .+-|-||-|-+.. ..+..-+..+++..|++.+++. ++..|+.+ T Consensus 254 v~~~~~HP~~~~~~~Gv---~v~l~TDDp~~f~----------t~Ls~Ey~~a~~~~~ls~~el~-~l~~nsi~ 313 (326) T 3ou8_A 254 FDDMSQHTILDMLERGV---KVTVNSDDPAYFG----------GYVTENFHALQQSLGMTEEQAR-RLAQNSLD 313 (326) T ss_dssp SSSGGGCCHHHHHHHTC---CEEECCBSTTTTT----------CCHHHHHHHHHHHHCCCHHHHH-HHHHHHHH T ss_pred CCCCCCCHHHHHHHCCC---EEEEECCCCHHHC----------CCHHHHHHHHHHHHCCCHHHHH-HHHHHHHH T ss_conf 89721488999998899---5998089813318----------8899999999998296999999-99999999 No 49 >3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} Probab=87.78 E-value=1.5 Score=22.90 Aligned_cols=22 Identities=5% Similarity=0.049 Sum_probs=19.7 Q ss_pred HCCCHHHHHHHHHHHHHHHHHH Q ss_conf 2899899999999999998425 Q gi|254780215|r 235 KDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 235 ~~~~~eei~~~~~~N~~~~f~~ 256 (262) .+++.+++.+..+.|.-++||. T Consensus 363 ~g~~~~~al~~~T~npA~~lgl 384 (468) T 3lnp_A 363 SAIPAIEALTMATLGGARALGI 384 (468) T ss_dssp TSSCHHHHHHHHTHHHHHHTTC T ss_pred CCCCHHHHHHHHHHHHHHHHCC T ss_conf 5888999999997999998099 No 50 >2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A* Probab=87.15 E-value=1.6 Score=22.67 Aligned_cols=22 Identities=23% Similarity=0.235 Sum_probs=19.0 Q ss_pred HCCCHHHHHHHHHHHHHHHHHH Q ss_conf 2899899999999999998425 Q gi|254780215|r 235 KDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 235 ~~~~~eei~~~~~~N~~~~f~~ 256 (262) .-++.+++.+.++.|.-++||. T Consensus 412 ~~lsle~av~~~T~npA~~lGL 433 (559) T 2fty_A 412 NLTSMMKLVEIQCTNPAKVYGM 433 (559) T ss_dssp SSSCHHHHHHHHTHHHHHHTTC T ss_pred CCCCHHHHHHHHHHHHHHHCCC T ss_conf 9998999999999999998299 No 51 >2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans} Probab=86.59 E-value=1.8 Score=22.47 Aligned_cols=37 Identities=8% Similarity=-0.158 Sum_probs=28.0 Q ss_pred EEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECC Q ss_conf 1686138887565226899999999869989999167 Q gi|254780215|r 2 LIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAI 38 (262) Q Consensus 2 ~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~ 38 (262) --|.|||.....-....+++++.|.+.|+..+..+.. T Consensus 328 ~gDlH~HT~~Sdg~~t~~e~v~aA~~~Gl~~i~iTDH 364 (578) T 2w9m_A 328 RGMIHTHSTWSDGGASIREMAEATLTLGHEFLGTADH 364 (578) T ss_dssp CEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECEE T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC T ss_conf 4662015676788787999999999869986998368 No 52 >3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A* Probab=85.56 E-value=1.7 Score=22.55 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=37.8 Q ss_pred EEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEEC-CCHHHHHHHHHHHHHCCC Q ss_conf 168613888756522689999999986998999916-798778999999985572 Q gi|254780215|r 2 LIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIA-IKVKDFVPLIKLCQDYPS 55 (262) Q Consensus 2 ~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~-~~~~~~~~~~~l~~~~p~ 55 (262) .||-|||-...+-....++++++|.+.|+..+.++- .+...+.+..+.+++++- T Consensus 14 ~~DLH~HT~ySDG~~~~eelv~~A~e~G~~~iaITDH~~l~G~~~~~~~a~~~gi 68 (301) T 3o0f_A 14 GWDIHCHTVFSDGTETPRTLVEQARKLGLHGVAIADHDTTAGWDEATEASEEIGL 68 (301) T ss_dssp SEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTC T ss_pred CEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCC T ss_conf 7647818574389998999999999889999999789985029999999987499 No 53 >3iac_A Glucuronate isomerase; IDP02065, structural genomics, center for structural genomics of infectious diseases, csgid; 2.22A {Salmonella typhimurium} Probab=85.52 E-value=0.44 Score=26.47 Aligned_cols=134 Identities=13% Similarity=0.129 Sum_probs=65.7 Q ss_pred HHHHHHHHHHHCCCCCEEEC---HHHHHH----------------------HHHHHHHHHHCC-CCCCCCEECCCCHHHH Q ss_conf 89999876642044203300---023335----------------------799985310003-6753311214640234 Q gi|254780215|r 111 VFLRHIEASRITGIPLVIHS---RSADDD----------------------MAAILQEEMKKG-PFPFVIHCFSSSQKLA 164 (262) Q Consensus 111 vF~~ql~lA~e~~~pv~iH~---r~a~~~----------------------~l~iL~~~~~~~-~~~~i~H~FsG~~~~~ 164 (262) +|....+++.+.|+|..+|- |+-... +-.+|....... -.++|+.+-+-. .- T Consensus 284 ~l~~la~~~~e~g~vmQlHiGa~Rn~n~~~~~~lG~D~G~D~~~d~~~~~~L~~lL~~l~~~~~l~k~ily~Lnp~--~n 361 (473) T 3iac_A 284 VLVWLGRQYAARGWVMQLHIGAIRNNNTRMFRLLGPDTGFDSIGDNNISWALSRLLDSMDVTNELPKTILYCLNPR--DN 361 (473) T ss_dssp HHHHHHHHHHHHTCEEEEEECEECCCCHHHHHHHCSSSSCCEECCCCCHHHHHHHHHHHHTTTCCCEEEEEESSGG--GH T ss_pred HHHHHHHHHHHCCCHHHEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC--CH T ss_conf 9999999998689841012676668777899871888888887867899999999999846799876999827975--28 Q ss_pred HHHHCC-C----------------CEEECCCCCCHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCCCCCCCCCCHHHHHH Q ss_conf 432103-5----------------2020233221133322333321056671-798307866787776887588244999 Q gi|254780215|r 165 DICLEL-G----------------GYISFTGMITFPKYDALRAIARGIPMDR-VLVETDSPYIVPVSCQGKRNEPAYVVN 226 (262) Q Consensus 165 ~~~l~~-g----------------~y~S~~g~i~~~~~~~~~e~v~~iPldr-iLlETDsP~l~p~~~r~~~n~P~~i~~ 226 (262) ..+.-+ | |||.=++.-. ...++.+....++.+ +=.=|||--+..-| | . .+-.+ T Consensus 362 ~~la~~ag~f~~~~v~g~vq~G~~WWF~D~~~gm---~~q~~~~~~~~~ls~fvGmltDsRsflS~~-R--H---eyfRR 432 (473) T 3iac_A 362 EVLATMIGNFQGPGIAGKVQFGSGWWFNDQKDGM---LRQLEQLSQMGLLSQFVGMLTDSRSFLSYT-R--H---EYFRR 432 (473) T ss_dssp HHHHHHGGGSCCTTSTTSEEECCCCGGGCSHHHH---HHHHHHHHHHSCGGGCCCCCCCCSCTTTTH-H--H---HHHHH T ss_pred HHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHH---HHHHHHHHHHHCCCCCCCCCCCCHHHHHHH-H--H---HHHHH T ss_conf 9999998753588878710035851313779999---999999998735313225225753344458-9--9---99999 Q ss_pred -HHHHHHHHH-----CCCHH----HHHHHHHHHHHHHHH Q ss_conf -999999872-----89989----999999999999842 Q gi|254780215|r 227 -TAKALAKEK-----DVSYE----DLMEETTKNALKLFS 255 (262) Q Consensus 227 -~~~~iA~i~-----~~~~e----ei~~~~~~N~~~~f~ 255 (262) .+..+++.- ..+.+ -+.++++.|++++|+ T Consensus 433 ilc~~L~~~Ve~G~~p~d~a~l~~~v~di~y~Na~~~f~ 471 (473) T 3iac_A 433 ILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFT 471 (473) T ss_dssp HHHHHHHHHHHTTSSCCCHHHHHHHHHHHHTHHHHHHTS T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC T ss_conf 999999999984988910889999999999877998819 No 54 >1u83_A Phosphosulfolactate synthase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.20A {Bacillus subtilis} SCOP: c.1.27.1 Probab=85.07 E-value=2.1 Score=21.99 Aligned_cols=163 Identities=16% Similarity=0.175 Sum_probs=88.4 Q ss_pred HHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC-CEECCCCCCCCCCCC Q ss_conf 9986998999916798778999999985572332112445443344678899885310013332-100446775533221 Q gi|254780215|r 25 AHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRV-VAIGETGLDRYHNAH 103 (262) Q Consensus 25 a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~-~aIGEiGLD~~~~~~ 103 (262) =+..|++.++.++..+...+..++.+..|=+.+..+.|-. ...+ . +.+..++..+..| +..| .+ T Consensus 37 PR~~GlT~V~DkGl~l~~leD~Le~~g~yID~vKfg~GTs--~l~~---~-L~eKI~l~~~~~V~v~~G---------GT 101 (276) T 1u83_A 37 PRETGQSILIDNGYPLQFFKDAIAGASDYIDFVKFGWGTS--LLTK---D-LEEKISTLKEHDITFFFG---------GT 101 (276) T ss_dssp SCSSSCEEEEESSCCHHHHHHHHHHHGGGCCEEEECTTGG--GGCT---T-HHHHHHHHHHTTCEEEEC---------HH T ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHHEEEEEECCCEE--CCCH---H-HHHHHHHHHHCCCEEECC---------CH T ss_conf 8546836894299998999999997454525888548533--1268---9-999999999869969789---------68 Q ss_pred CCH--HHHHHHHHHHHHHHHCCCCCEEECHH----HHHHHHHHHHHHHHCCCCCCCCEECCCC--------------HHH Q ss_conf 110--24678999987664204420330002----3335799985310003675331121464--------------023 Q gi|254780215|r 104 TIE--EQKVVFLRHIEASRITGIPLVIHSRS----ADDDMAAILQEEMKKGPFPFVIHCFSSS--------------QKL 163 (262) Q Consensus 104 ~~e--~Q~~vF~~ql~lA~e~~~pv~iH~r~----a~~~~l~iL~~~~~~~~~~~i~H~FsG~--------------~~~ 163 (262) -.| ..+..|+..++.+++++..++==+.+ .+++-.++++..... +.+-+=.|. .++ T Consensus 102 lfE~a~~q~~~d~yl~~~k~lGf~~IEISdGsi~i~~~~~~~~I~~~~~~----~~V~sEvG~K~~~~~~~~~~~~~i~~ 177 (276) T 1u83_A 102 LFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE----FLVLSEVGSKDAELASRQSSEEWLEY 177 (276) T ss_dssp HHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT----SEEEEECSCCC------CCSTHHHHH T ss_pred HHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHC----CEECCCCCCCCCCCCCCCCHHHHHHH T ss_conf 99999981889999999998599889978980128989999999999854----93454357767643577899999999 Q ss_pred HHHHHCCCCEEEC-------CCCCCHH----HHHHHHHHHH-CCCCCCEEEEECCCC Q ss_conf 4432103520202-------3322113----3322333321-056671798307866 Q gi|254780215|r 164 ADICLELGGYISF-------TGMITFP----KYDALRAIAR-GIPMDRVLVETDSPY 208 (262) Q Consensus 164 ~~~~l~~g~y~S~-------~g~i~~~----~~~~~~e~v~-~iPldriLlETDsP~ 208 (262) +++.++.|.+.=+ ++-++.. +.+-+.+++. .+|+++++.| ||. T Consensus 178 ~~~~LeAGA~~VIiEarEsg~~Gi~~~~g~~r~~~i~~ii~~~~~~e~iifE--AP~ 232 (276) T 1u83_A 178 IVEDMEAGAEKVITEARESGTGGICSSSGDVRFQIVDDIISSDIDINRLIFE--APN 232 (276) T ss_dssp HHHHHHHTEEEEEEC------------------CCHHHHHTTTSCGGGEEEE--CCS T ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEE--CCC T ss_conf 9999977984899961024777775888770589999999826883018996--798 No 55 >1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1 Probab=82.29 E-value=2.7 Score=21.24 Aligned_cols=170 Identities=17% Similarity=0.195 Sum_probs=89.1 Q ss_pred HHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC-CEECCCCCCCCCCCC Q ss_conf 9986998999916798778999999985572332112445443344678899885310013332-100446775533221 Q gi|254780215|r 25 AHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRV-VAIGETGLDRYHNAH 103 (262) Q Consensus 25 a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~-~aIGEiGLD~~~~~~ 103 (262) -+..|++-++-.|..+...+..++.+..|=+.+..+.|-+-- .+++++.+..++.....+ +..|= .++ T Consensus 10 ~~~~GlTmv~DkGlgl~~leD~Le~ag~yID~~K~g~GTs~l----~~~~~L~eKI~l~~~~~V~v~~GG---tlf---- 78 (251) T 1qwg_A 10 DFQRGLTVVLDKGLPPKFVEDYLKVCGDYIDFVKFGWGTSAV----IDRDVVKEKINYYKDWGIKVYPGG---TLF---- 78 (251) T ss_dssp CCCCCCEEEEESSCCHHHHHHHHHHHGGGCSEEEECTTGGGG----SCHHHHHHHHHHHHTTTCEEEECH---HHH---- T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCEEEE----CCHHHHHHHHHHHHHCCCEEECCC---HHH---- T ss_conf 766884899518999899999999735443589855756500----588999999999998698275795---799---- Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEECHHH----HHHHHHHHHHHHHCCCCCCCC--EECCC----------CHHHHHHH Q ss_conf 110246789999876642044203300023----335799985310003675331--12146----------40234432 Q gi|254780215|r 104 TIEEQKVVFLRHIEASRITGIPLVIHSRSA----DDDMAAILQEEMKKGPFPFVI--HCFSS----------SQKLADIC 167 (262) Q Consensus 104 ~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a----~~~~l~iL~~~~~~~~~~~i~--H~FsG----------~~~~~~~~ 167 (262) ....++..|+..++.|++++...+==+.+. +++-.++++..... ..+++- ++=.+ =.+++++. T Consensus 79 E~a~~q~~~~~y~~~~~~lGf~~IEiSdG~i~i~~~~~~~~I~~a~~~-G~~V~~EvG~K~~~~~~~~~~~~~i~~~~~~ 157 (251) T 1qwg_A 79 EYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDN-GFMVLTEVGKKMPDKDKQLTIDDRIKLINFD 157 (251) T ss_dssp HHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHT-TCEEEEEECCSSHHHHTTCCHHHHHHHHHHH T ss_pred HHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCCCCCCCCCCHHHHHHHHHHH T ss_conf 999974968999999998599889973984468989999999999858-9989505457888866666999999999999 Q ss_pred HCCCCEEECC-----C---CCCHH----HHHHHHHHHHCCCCCCEEEEECCCC Q ss_conf 1035202023-----3---22113----3322333321056671798307866 Q gi|254780215|r 168 LELGGYISFT-----G---MITFP----KYDALRAIARGIPMDRVLVETDSPY 208 (262) Q Consensus 168 l~~g~y~S~~-----g---~i~~~----~~~~~~e~v~~iPldriLlETDsP~ 208 (262) ++.|.+.=+- | -++.. +.+-+.++++.+|+++++.| ||. T Consensus 158 LeaGA~~ViiEarEsG~~~Gi~~~~g~~r~~~i~~i~~~~~~~~iifE--AP~ 208 (251) T 1qwg_A 158 LDAGADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKNVDINKVIFE--APQ 208 (251) T ss_dssp HHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHTTSCGGGEEEE--CCS T ss_pred HHCCCCEEEEEHHHCCCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEE--CCC T ss_conf 966881788622320776013468887018899999985892027997--898 No 56 >2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3gay_A* 3gak_A* 3gb6_A* Probab=82.25 E-value=2.7 Score=21.23 Aligned_cols=177 Identities=17% Similarity=0.131 Sum_probs=89.6 Q ss_pred EECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHH------HHHHHHHHHHHCCCCCCCCCCCCCCCC------CCC- Q ss_conf 6138887565226899999999869989999167987------789999999855723321124454433------446- Q gi|254780215|r 5 THCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVK------DFVPLIKLCQDYPSSIFCSVGTHPCHA------HEE- 71 (262) Q Consensus 5 ~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~------~~~~~~~l~~~~p~~i~~a~GiHP~~~------~~~- 71 (262) .-.|||+- .+++ .+.+|.+.|..-++.=+.... ...++.+++..+.-.+=.=+|.=+-.- ..+ T Consensus 78 v~lHlDH~---~~~e-~i~~ai~~GftSVMiDgS~lp~eeNI~~Tk~vv~~Ah~~gv~VEaElG~vgg~ed~~~~~~~~T 153 (323) T 2isw_A 78 ICIHLDHG---DTLE-SVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLT 153 (323) T ss_dssp EEEEEEEE---CSHH-HHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCC T ss_pred EEEECCCC---CCHH-HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCC T ss_conf 89979998---8999-9999997189869983882339999999999999986538718996420367676765545579 Q ss_pred CHHHHHHHHHHC-CCCCCCEECCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH-HHHHHHHHHHHHHHHCC Q ss_conf 788998853100-13332100446-7755332211102467899998766420442033000-23335799985310003 Q gi|254780215|r 72 NEVLVDELVCLA-SHPRVVAIGET-GLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR-SADDDMAAILQEEMKKG 148 (262) Q Consensus 72 ~~~~~~~l~~l~-~~~~~~aIGEi-GLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r-~a~~~~l~iL~~~~~~~ 148 (262) +++....+.+.. .+.=.++||=+ |. |......+.+ -.|++.-++....+.|+++|-- +...+.++.+.. T Consensus 154 ~PeeA~~Fv~~TgvD~LAvaiGn~HG~--yk~~~~~~~~-l~~~~l~~I~~~~~~PLVlHGgS~~~~~~~~~~~~----- 225 (323) T 2isw_A 154 EPQDAKKFVELTGVDALAVAIGTSHGA--YKFKSESDIR-LAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINK----- 225 (323) T ss_dssp CHHHHHHHHHHHCCSEEEECSSCCSSS--BCCCC----C-CCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHH----- T ss_pred CHHHHHHHHHCCCCCEEEECCCCCCCC--CCCCCCCCHH-HCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH----- T ss_conf 989999998611888442010000366--7787887410-15999998763149876841887775036778875----- Q ss_pred CCCCCCEECCC-CHHHHHHHHCCCC-EEECCCCCCHHHHHHHHHHHHC Q ss_conf 67533112146-4023443210352-0202332211333223333210 Q gi|254780215|r 149 PFPFVIHCFSS-SQKLADICLELGG-YISFTGMITFPKYDALRAIARG 194 (262) Q Consensus 149 ~~~~i~H~FsG-~~~~~~~~l~~g~-y~S~~g~i~~~~~~~~~e~v~~ 194 (262) .++.+|.=+| +.++.++.++.|. .+-|+..+...=.+.+++.+.. T Consensus 226 -~g~~~hg~~G~~~e~i~~ai~~GV~KiNi~T~~~~a~~~~~~~~l~~ 272 (323) T 2isw_A 226 -YGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVE 272 (323) T ss_dssp -TTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH T ss_pred -CCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHH T ss_conf -17756677899899999999889888458716899999999999986 No 57 >2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6 Probab=81.95 E-value=2.8 Score=21.16 Aligned_cols=34 Identities=6% Similarity=0.129 Sum_probs=26.3 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 4999999999872899899999999999998425 Q gi|254780215|r 223 YVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 223 ~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) .+....+....-.+++.+++.+.++.|.-++||. T Consensus 354 ~~~~~~~~~v~~~~ls~~eav~~~T~n~Ak~lgl 387 (521) T 2ftw_A 354 RMSIVWENGVNTGKLTWCQFVRATSSERARIFNI 387 (521) T ss_dssp HHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTC T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC T ss_conf 8999999998717999999999875889997397 No 58 >1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A* Probab=80.38 E-value=3.1 Score=20.81 Aligned_cols=177 Identities=13% Similarity=0.069 Sum_probs=91.4 Q ss_pred EEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHH------HHHHHHHHHHHCCCCCCCCCCCCCCC-------CC- Q ss_conf 86138887565226899999999869989999167987------78999999985572332112445443-------34- Q gi|254780215|r 4 DTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVK------DFVPLIKLCQDYPSSIFCSVGTHPCH-------AH- 69 (262) Q Consensus 4 D~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~------~~~~~~~l~~~~p~~i~~a~GiHP~~-------~~- 69 (262) ..-+|||+- .+++. +.+|.+.|..-++.=+.... ...++.+++..+.-.|=.=+|.=+-. .. T Consensus 74 pvalHlDH~---~~~e~-i~~ai~~GftSVMiDgS~l~~eeNi~~T~~vv~~Ah~~gv~VEaElG~igg~Ed~~~~~~~~ 149 (305) T 1rvg_A 74 PVAVHLDHG---SSYES-VLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKD 149 (305) T ss_dssp CEEEEEEEE---CSHHH-HHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CC T ss_pred CEEEECCCC---CCHHH-HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC T ss_conf 989974555---79888-99998749987986499888899999999999986151887665022125655555666432 Q ss_pred -CC-CHHHHHHHHH-HCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHH-HHHHHHHHHHHHH Q ss_conf -46-7889988531-001333210044677553322111024678999987664204420330002-3335799985310 Q gi|254780215|r 70 -EE-NEVLVDELVC-LASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRS-ADDDMAAILQEEM 145 (262) Q Consensus 70 -~~-~~~~~~~l~~-l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~-a~~~~l~iL~~~~ 145 (262) .+ +++....+.+ --.+.=.++||=+---| . ..+ ..+ --|++.-++....+.|+++|.-. -..+....+.. T Consensus 150 ~~~T~Peea~~Fv~~TgvD~LAvaiGn~HG~y-k-~~~-~~~-l~~~~l~~i~~~~~~PLvlHG~S~~~~~~~~~~~~-- 223 (305) T 1rvg_A 150 ALLTNPEEARIFMERTGADYLAVAIGTSHGAY-K-GKG-RPF-IDHARLERIARLVPAPLVLHGASAVPPELVERFRA-- 223 (305) T ss_dssp TTCCCHHHHHHHHHHHCCSEEEECSSCCSSSB-C-SSS-SCC-CCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHH-- T ss_pred CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC-C-CCC-CCC-CHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHC-- T ss_conf 45689999999999758876854302245766-8-888-866-24889999961679987866897773777777630-- Q ss_pred HCCCCCCCCEECCCC-HHHHHHHHCCCC-EEECCCCCCHHHHHHHHHHHHC Q ss_conf 003675331121464-023443210352-0202332211333223333210 Q gi|254780215|r 146 KKGPFPFVIHCFSSS-QKLADICLELGG-YISFTGMITFPKYDALRAIARG 194 (262) Q Consensus 146 ~~~~~~~i~H~FsG~-~~~~~~~l~~g~-y~S~~g~i~~~~~~~~~e~v~~ 194 (262) .+.++|.=||. .++.++.+++|. .+-|+..+...=.+.+|+.+.. T Consensus 224 ----~~~~lHG~sG~~~e~i~~ai~~GI~KiNi~T~l~~a~~~~l~~~~~~ 270 (305) T 1rvg_A 224 ----SGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNK 270 (305) T ss_dssp ----TTCCCCSCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH T ss_pred ----CCCCCCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH T ss_conf ----47655777899999999999869559997818999999999999985 No 59 >3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A* Probab=79.21 E-value=3.4 Score=20.57 Aligned_cols=176 Identities=16% Similarity=0.079 Sum_probs=87.2 Q ss_pred EECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCH------HHHHHHHHHHHHCCCCCCCCCCCCCC---CC------C Q ss_conf 613888756522689999999986998999916798------77899999998557233211244544---33------4 Q gi|254780215|r 5 THCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKV------KDFVPLIKLCQDYPSSIFCSVGTHPC---HA------H 69 (262) Q Consensus 5 ~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~------~~~~~~~~l~~~~p~~i~~a~GiHP~---~~------~ 69 (262) .-+|||+- .+++ .+.+|.+.|..-++.=+... +-..++.+++..+.-.|=.=+|.=.- .. . T Consensus 77 v~lHLDH~---~~~e-~i~~ai~~GftSVMiDgS~lp~eeNi~~T~~vve~Ah~~gv~VEaElG~igg~e~~~~~~~~~~ 152 (307) T 3n9r_A 77 VALHLDHG---TTFE-SCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDA 152 (307) T ss_dssp EEEEEEEE---CSHH-HHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------C T ss_pred EEEECCCC---CCHH-HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCC T ss_conf 89971787---9999-9999997199868860998999999999999999982539828987412157678766555321 Q ss_pred CC-CHHHHHHH-HHHCCCCCCCEECCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHH Q ss_conf 46-78899885-310013332100446-7755332211102467899998766420442033000233357999853100 Q gi|254780215|r 70 EE-NEVLVDEL-VCLASHPRVVAIGET-GLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMK 146 (262) Q Consensus 70 ~~-~~~~~~~l-~~l~~~~~~~aIGEi-GLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~ 146 (262) .+ +++....+ ++--.+.=.++||=+ |.-. ... ....+ |++.-+++...+.|+++|-...-.+-+. +.. T Consensus 153 ~~T~Peea~~Fv~~TgvD~LAvaiGn~HG~yk-~~~-~p~ld---~~~l~~I~~~~~vPLVlHG~S~v~d~~~--~~~-- 223 (307) T 3n9r_A 153 VLVNPKEAEQFVKESQVDYLAPAIGTSHGAFK-FKG-EPKLD---FERLQEVKRLTNIPLVLHGASAIPDNVR--KSY-- 223 (307) T ss_dssp CSCCHHHHHHHHHHHCCSEEEECSSCCSSSBC-CSS-SCCCC---HHHHHHHHHHHCSCEEESSCCCCCHHHH--HHH-- T ss_pred CCCCHHHHHHHHHHHCCCEECHHHCCCCCCCC-CCC-CCCCC---HHHHHHHHHHCCCCEECCCCCCCCHHHH--HHH-- T ss_conf 24798999999871088734221122336777-889-87768---9999998850588655478876617777--764-- Q ss_pred CCCCCCCCEECCCC-HHHHHHHHCCCC-EEECCCCCCHHHHHHHHHHHHC Q ss_conf 03675331121464-023443210352-0202332211333223333210 Q gi|254780215|r 147 KGPFPFVIHCFSSS-QKLADICLELGG-YISFTGMITFPKYDALRAIARG 194 (262) Q Consensus 147 ~~~~~~i~H~FsG~-~~~~~~~l~~g~-y~S~~g~i~~~~~~~~~e~v~~ 194 (262) .+.++++|.=||. .++.++.++.|. .+-++..+...=.+.+|+.+.. T Consensus 224 -~~~~~~~HG~sG~p~e~i~~ai~~Gi~KiNi~T~l~~a~~~~~~~~~~~ 272 (307) T 3n9r_A 224 -LDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANE 272 (307) T ss_dssp -HHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH T ss_pred -HCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH T ss_conf -0123346788899999999999779469997879999999999999984 No 60 >3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} Probab=79.17 E-value=3.4 Score=20.56 Aligned_cols=119 Identities=12% Similarity=0.097 Sum_probs=59.0 Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCC-------CCCCCHHHHHHHHHHCC--CCCCCEECCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 999999985572332112445443-------34467889988531001--333210044677553322111024678999 Q gi|254780215|r 44 VPLIKLCQDYPSSIFCSVGTHPCH-------AHEENEVLVDELVCLAS--HPRVVAIGETGLDRYHNAHTIEEQKVVFLR 114 (262) Q Consensus 44 ~~~~~l~~~~p~~i~~a~GiHP~~-------~~~~~~~~~~~l~~l~~--~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ 114 (262) ++..+..++.. . .|+|+-|+. .....+...+..+.++. .+.++++ -.|++||....+.- .+++++ T Consensus 13 ~rl~~~~~~~~-~--LcvGlDp~~~~lp~~~~~~~~~~~~~f~~~iida~~~~v~~~-K~~~affe~~G~~G--~~~L~~ 86 (284) T 3l52_A 13 ARLSRAMDDRG-P--LCVGIDPHASLLADWGLSDDVAGLERFSRTVVEALGEHVAVF-KPQSAFFERFGSRG--VAVLEK 86 (284) T ss_dssp HHHHHHHHHHC-S--CEEEECCCHHHHHHTTCCSSHHHHHHHHHHHHHHHTTTCSEE-EEBHHHHHTTHHHH--HHHHHH T ss_pred HHHHHHHHHHC-C--EEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE-ECCHHHHHHCCHHH--HHHHHH T ss_conf 99999999729-8--899989894766010466657999999999999725733499-56099997569989--999999 Q ss_pred HHHHHHHCCCCCEEECH-HHHHHHHH-HHHHHHHC----CCCCCCCEECCCCHHHHHHHHC Q ss_conf 98766420442033000-23335799-98531000----3675331121464023443210 Q gi|254780215|r 115 HIEASRITGIPLVIHSR-SADDDMAA-ILQEEMKK----GPFPFVIHCFSSSQKLADICLE 169 (262) Q Consensus 115 ql~lA~e~~~pv~iH~r-~a~~~~l~-iL~~~~~~----~~~~~i~H~FsG~~~~~~~~l~ 169 (262) -+.-+++.++||++-.. .--.-|.. ..+..... +..-+-+|.|.|. ++++.+++ T Consensus 87 ~~~~~~~~g~~VilD~K~~DIgnTv~~~a~a~~~~~~~lgaDavTvhp~~G~-d~l~~~~e 146 (284) T 3l52_A 87 TVAEARAAGALVVMDAKRGDIGSTMAAYAEAFLRKDSPLFSDALTVSPYLGY-GSLRPAVE 146 (284) T ss_dssp HHHHHHHTTCEEEEEEEECCCHHHHHHHHHHHSSTTSTTCCSEEEECCTTCG-GGGHHHHH T ss_pred HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCH-HHHHHHHH T ss_conf 9998650798599851557845799999999973034456767997367874-46699999 No 61 >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Probab=78.10 E-value=3.7 Score=20.35 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=46.0 Q ss_pred CHHHHHHHHHHHHHHHHCCCCCEE--EC-H-----------HHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHH-C Q ss_conf 102467899998766420442033--00-0-----------2333579998531000367533112146402344321-0 Q gi|254780215|r 105 IEEQKVVFLRHIEASRITGIPLVI--HS-R-----------SADDDMAAILQEEMKKGPFPFVIHCFSSSQKLADICL-E 169 (262) Q Consensus 105 ~e~Q~~vF~~ql~lA~e~~~pv~i--H~-r-----------~a~~~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l-~ 169 (262) .+.|...++.+|+-|...++++++ |- . ...++++++|.++. .|.-+|+|=.-...... . T Consensus 202 ~~~Q~~wl~~~L~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~l~~~~------~V~~v~~GH~H~~~~~~~~ 275 (322) T 2nxf_A 202 SEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQ------SVLCFIAGHDHDGGRCTDS 275 (322) T ss_dssp CHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGGGSCTTHHHHHHHHHTCT------TEEEEEECSCTTCEEEECT T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC------CEEEEEECCCCCCCEEECC T ss_conf 8999999999998626428748999921897777887631134999999997489------8469994774788633444 Q ss_pred CCC-EEECCCCCCHHHHHHHHHHHHCCCCCCEEEE Q ss_conf 352-0202332211333223333210566717983 Q gi|254780215|r 170 LGG-YISFTGMITFPKYDALRAIARGIPMDRVLVE 203 (262) Q Consensus 170 ~g~-y~S~~g~i~~~~~~~~~e~v~~iPldriLlE 203 (262) .|. |++.++.+........-.++. +-.|++.++ T Consensus 276 ~gi~~v~~~~~~~~~~~~~~~~~~~-~~~d~~~i~ 309 (322) T 2nxf_A 276 SGAQHITLEGVIETPPHSHAFATAY-LYEDRMVMK 309 (322) T ss_dssp TSCEEEECCCGGGCCTTSCEEEEEE-ECSSEEEEE T ss_pred CCCEEEECCEECCCCCCCCCEEEEE-EECCEEEEE T ss_conf 8976997780202689999889999-989999999 No 62 >2q01_A Uronate isomerase; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics; 2.34A {Caulobacter crescentus CB15} Probab=76.15 E-value=4.1 Score=20.00 Aligned_cols=135 Identities=9% Similarity=0.018 Sum_probs=66.4 Q ss_pred HHHHHHHHHHHCCCCCEEEC---HHH-------------------------HHHHHHHHHHHHHCCCCCCCCEECCCC-H Q ss_conf 89999876642044203300---023-------------------------335799985310003675331121464-0 Q gi|254780215|r 111 VFLRHIEASRITGIPLVIHS---RSA-------------------------DDDMAAILQEEMKKGPFPFVIHCFSSS-Q 161 (262) Q Consensus 111 vF~~ql~lA~e~~~pv~iH~---r~a-------------------------~~~~l~iL~~~~~~~~~~~i~H~FsG~-~ 161 (262) +|....+++.+.|+|..+|. |+- -..+++.+.++. .. .++++|+-+-. . T Consensus 291 lL~~l~~~~~e~gwvmQlHiGa~Rn~n~~~~~~lG~dtG~D~~~~~~~~~~L~~ll~~l~~~p-~l-~~vl~~~~~p~~~ 368 (497) T 2q01_A 291 MLTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIPMRTEYVDALKPLLTRLGNDP-RL-SIILFTLDETTYS 368 (497) T ss_dssp HHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEECCCCCTTTSHHHHHHHTTCT-TC-CEEECCSCTTHHH T ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CC-CEEEEECCCCCHH T ss_conf 999999999878982886165455771899997099988778674889999999999841589-99-8799967995148 Q ss_pred HHHHHHH--------CCCCEEECCCCCCHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCCCCCCCCCCHHHHH-HHHHHH Q ss_conf 2344321--------0352020233221133322333321056671-79830786678777688758824499-999999 Q gi|254780215|r 162 KLADICL--------ELGGYISFTGMITFPKYDALRAIARGIPMDR-VLVETDSPYIVPVSCQGKRNEPAYVV-NTAKAL 231 (262) Q Consensus 162 ~~~~~~l--------~~g~y~S~~g~i~~~~~~~~~e~v~~iPldr-iLlETDsP~l~p~~~r~~~n~P~~i~-~~~~~i 231 (262) ..+-.+. ..||||.-++. -. ...+..+....|+.+ +..=|||-.+.--|.|- .+-. ..+..+ T Consensus 369 ~~la~lag~f~~vq~g~~WWF~D~~~--Gm-~rql~~l~~~~~ls~fvGmlTDsRsflSyp~RH-----eyfRRiLc~~L 440 (497) T 2q01_A 369 RELAPLAGHYPVLKLGPSWWFHDSPE--GM-MRFREQVTETAGFYNTVGFNDDTRAFLSIPARH-----DVARRVDSAFL 440 (497) T ss_dssp HTHHHHHTTCTTEEECCCCGGGCSHH--HH-HHHHHHHHHHHCSTTBCCCCCCCSCGGGHHHHH-----HHHHHHHHHHH T ss_pred HHHHHHHCCCCCCCCCCCHHHCCCHH--HH-HHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHH-----HHHHHHHHHHH T ss_conf 99999962285035367223038899--99-999999998422420146445762021364899-----99999999999 Q ss_pred HHHH---CCCHHH----HHHHHHHHHHHHHH Q ss_conf 9872---899899----99999999999842 Q gi|254780215|r 232 AKEK---DVSYED----LMEETTKNALKLFS 255 (262) Q Consensus 232 A~i~---~~~~ee----i~~~~~~N~~~~f~ 255 (262) ++.- .++.++ +..++++|++++|+ T Consensus 441 ~~~V~~G~ld~~~a~~lv~dI~y~Na~~~f~ 471 (497) T 2q01_A 441 ARMVAEHRMDLVEAEELIVDLTYNLPKKAYK 471 (497) T ss_dssp HHHHHTTSSCHHHHHHHHHHHHTHHHHHHTT T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC T ss_conf 9999818899999999999999876999819 No 63 >1v93_A 5,10-methylenetetrahydrofolate reductase; flavoprotein, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 1.90A {Thermus thermophilus HB8} SCOP: c.1.23.1 Probab=76.07 E-value=4.1 Score=19.99 Aligned_cols=116 Identities=19% Similarity=0.276 Sum_probs=50.7 Q ss_pred EEECCCCCHHH-HCCHHHHHHHHHHCCCCEEEEECCCHH--------------HHHHHHHHH-HHCCCCCCCCCCCCCCC Q ss_conf 86138887565-226899999999869989999167987--------------789999999-85572332112445443 Q gi|254780215|r 4 DTHCHLLLPDF-DEDRHDVIMRAHQANVLKMIAIAIKVK--------------DFVPLIKLC-QDYPSSIFCSVGTHPCH 67 (262) Q Consensus 4 D~H~HL~~~~~-~~d~~~~i~~a~~~gv~~~i~~~~~~~--------------~~~~~~~l~-~~~p~~i~~a~GiHP~~ 67 (262) +.=.||+.... ...+...+..+...||..+++++-|+. +....+++. +.+.+.+...++.||.. T Consensus 73 ~~i~Hltcr~~n~~~l~~~l~~~~~~GI~niLal~GD~p~~~~~~~~~~~~~~~a~~Li~~i~~~~~~~~~igva~~Peg 152 (296) T 1v93_A 73 NPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEG 152 (296) T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTTCCEEEECCCCCCTTCSSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTC T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC T ss_conf 85025776369788899999999981988676614887665767788742126799999999972565545555568877 Q ss_pred CCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCCEE Q ss_conf 3446788998853100133321004467755332211102467899998766420--442033 Q gi|254780215|r 68 AHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRIT--GIPLVI 128 (262) Q Consensus 68 ~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~--~~pv~i 128 (262) -.+..+. ...+..+..+ + +.|-||.-++--.+ -+.|.+.++.+++. ++|+++ T Consensus 153 hp~~~~~-~~di~~l~~K--~----~aGA~f~iTQ~~fd--~~~~~~~~~~~r~~gi~~Pii~ 206 (296) T 1v93_A 153 HPESESL-EADLRHFKAK--V----EAGLDFAITQLFFN--NAHYFGFLERARRAGIGIPILP 206 (296) T ss_dssp CTTCSSH-HHHHHHHHHH--H----HTTCSEEEEEECSS--HHHHHHHHHHHHHTTCCSCEEE T ss_pred CCCCCHH-HHHHHHHHHH--H----HCCCCEEEEEEEEC--HHHHHHHHHHHHHCCCCCCEEE T ss_conf 8641339-9999999999--9----81887066211662--8999999999997599976798 No 64 >2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A* Probab=75.51 E-value=4.3 Score=19.89 Aligned_cols=158 Identities=10% Similarity=0.054 Sum_probs=77.5 Q ss_pred CCCCCHH--HHCCHHHHHHHHHHCCCCEEEEEC-----CCHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCH----H Q ss_conf 3888756--522689999999986998999916-----798778999999985572332112445443-344678----8 Q gi|254780215|r 7 CHLLLPD--FDEDRHDVIMRAHQANVLKMIAIA-----IKVKDFVPLIKLCQDYPSSIFCSVGTHPCH-AHEENE----V 74 (262) Q Consensus 7 ~HL~~~~--~~~d~~~~i~~a~~~gv~~~i~~~-----~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~-~~~~~~----~ 74 (262) ++...+. ...|+.+.++++.+.|...+=... .+..+.....+++++++-.+....|+++.. ....++ . T Consensus 6 ~~~~~~~~~~~~D~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~~~~~~~s~d~~~r~~ 85 (290) T 2qul_A 6 MFYTYWSTEWMVDFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDA 85 (290) T ss_dssp EETTSSCSSSCCCHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHH T ss_pred EEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHH T ss_conf 68787517888899999999998499999978777665898899999999997499689972267678989989999999 Q ss_pred HHHHHHHHCC------CCCCCEECCCCCCCCC--CCCC----CHHHHHHHHHHHHHHHHCCCCCEEECH--------HHH Q ss_conf 9988531001------3332100446775533--2211----102467899998766420442033000--------233 Q gi|254780215|r 75 LVDELVCLAS------HPRVVAIGETGLDRYH--NAHT----IEEQKVVFLRHIEASRITGIPLVIHSR--------SAD 134 (262) Q Consensus 75 ~~~~l~~l~~------~~~~~aIGEiGLD~~~--~~~~----~e~Q~~vF~~ql~lA~e~~~pv~iH~r--------~a~ 134 (262) .++.++..+. .+.++...-.+..... ...+ .+.-.+.+.+-.+.|++++..+.++.. ... T Consensus 86 ~~~~~~~~i~~A~~lG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~A~~~gi~l~iE~~~~~~~~~~~t~ 165 (290) T 2qul_A 86 GTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDA 165 (290) T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSH T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCH T ss_conf 99999999999998199889821555567778887446899999999999999999985152146563055446765879 Q ss_pred HHHHHHHHHHHHCCCCCCCC---EECCCCHHHHH Q ss_conf 35799985310003675331---12146402344 Q gi|254780215|r 135 DDMAAILQEEMKKGPFPFVI---HCFSSSQKLAD 165 (262) Q Consensus 135 ~~~l~iL~~~~~~~~~~~i~---H~FsG~~~~~~ 165 (262) .++++++++. .....++.+ |+..+..+..+ T Consensus 166 ~~~~~li~~~-~~~~vg~~~D~~h~~~~~~d~~~ 198 (290) T 2qul_A 166 KEAIAFADAV-DSPACKVQLDTFHMNIEETSFRD 198 (290) T ss_dssp HHHHHHHHHH-CCTTEEEEEEHHHHHHHCSCHHH T ss_pred HHHHHHHHHH-CCCCCEEEECHHHHHHHCCCHHH T ss_conf 9997666763-38764055557999870589999 No 65 >3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti} Probab=75.16 E-value=4.4 Score=19.83 Aligned_cols=35 Identities=9% Similarity=0.047 Sum_probs=26.6 Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 44999999999872899899999999999998425 Q gi|254780215|r 222 AYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 222 ~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ............-.+++.+++.+..+.|.-+.||. T Consensus 341 ~~~~~~~~~~~~~~~ls~~eai~~aT~n~Ak~lgl 375 (490) T 3dc8_A 341 DRMPMLWTYGVATGRITMNEFVAVTSTNIAKILNI 375 (490) T ss_dssp THHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTC T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC T ss_conf 66678889998718989999999973559998599 No 66 >1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A Probab=74.94 E-value=3.2 Score=20.77 Aligned_cols=140 Identities=11% Similarity=0.093 Sum_probs=65.2 Q ss_pred HHHHHHHHHCCCCEEEEECCC-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---HHHHHHH-HH------------ Q ss_conf 999999998699899991679-877899999998557233211244544334467---8899885-31------------ Q gi|254780215|r 19 HDVIMRAHQANVLKMIAIAIK-VKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEEN---EVLVDEL-VC------------ 81 (262) Q Consensus 19 ~~~i~~a~~~gv~~~i~~~~~-~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~---~~~~~~l-~~------------ 81 (262) ...+.++.+.|...++.+-++ .++-+.+.+.++ ||.. ..-|+.|....... ++..+.- .+ T Consensus 81 ~~~i~~~LD~Ga~GiivP~V~s~eea~~~v~~~r-ypP~--G~Rg~~~~~~~~~~~~~~~~~~~~n~~~~vi~qIEt~~a 157 (256) T 1dxe_A 81 PVIIKRLLDIGFYNFLIPFVETKEEAELAVASTR-YPPE--GIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQG 157 (256) T ss_dssp HHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTS-CTTT--CCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHH T ss_pred HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHEE-ECCC--CCCCCCCCHHHHCCCCCHHHHHHHHHCCEEHHHHCCHHH T ss_conf 9999998718989777278699999999997457-7999--987877320222135212789998432341021116789 Q ss_pred HCCCCCCCEECCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCEEEC---HHHHHHHHHHHHHHHHCCCCCCCCEEC Q ss_conf 0013332100446775533-221110246789999876642044203300---023335799985310003675331121 Q gi|254780215|r 82 LASHPRVVAIGETGLDRYH-NAHTIEEQKVVFLRHIEASRITGIPLVIHS---RSADDDMAAILQEEMKKGPFPFVIHCF 157 (262) Q Consensus 82 l~~~~~~~aIGEiGLD~~~-~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~---r~a~~~~l~iL~~~~~~~~~~~i~H~F 157 (262) +.+-+++.+| =|+|... ... +|+..++.|=..+. ..+.+++.+..+++ + ..+-.+ T Consensus 158 v~nldeI~av--~GvD~i~iGp~-------------DLs~slG~~g~~~~p~v~~ai~~v~~~~~~~---g---k~~G~~ 216 (256) T 1dxe_A 158 VDNVDAIAAT--EGVDGIFVGPS-------------DLAAALGHLGNASHPDVQKAIQHIFNRASAH---G---KPSGIL 216 (256) T ss_dssp HHTHHHHHTS--TTCCEEEECHH-------------HHHHHTTCTTCTTSHHHHHHHHHHHHHHHHT---T---CCEEEE T ss_pred HHHHHHHHCC--CCCCEEEECHH-------------HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC---C---CCEEEE T ss_conf 9878886057--89852567748-------------8987428888989879999999999999985---9---986882 Q ss_pred CCCHHHHHHHHCCCC-EEECCCCCCH Q ss_conf 464023443210352-0202332211 Q gi|254780215|r 158 SSSQKLADICLELGG-YISFTGMITF 182 (262) Q Consensus 158 sG~~~~~~~~l~~g~-y~S~~g~i~~ 182 (262) .++.+.+++++++|+ +++++..+.+ T Consensus 217 ~~~~~~~~~~~~~G~~~i~~g~D~~~ 242 (256) T 1dxe_A 217 APVEADARRYLEWGATFVAVGSDLGV 242 (256) T ss_dssp CCSHHHHHHHHHTTCCEEEEEEHHHH T ss_pred CCCHHHHHHHHHHCCCEEEEHHHHHH T ss_conf 79999999999819999995799999 No 67 >2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein structure initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A Probab=74.19 E-value=4.6 Score=19.67 Aligned_cols=134 Identities=15% Similarity=0.077 Sum_probs=63.1 Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHH-HHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHH-H-- Q ss_conf 6789999876642044203300023335-79998531000367533112146402344321035202023322113-3-- Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSADDD-MAAILQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFP-K-- 184 (262) Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a~~~-~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~-~-- 184 (262) ..........+...+.+..+|+...... .......+ . .....+...-..+..................... . T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (419) T 2puz_A 234 VKEIDRVFAAAQQRGLPVKLHAEQLSNLGGAELAASY-N---ALSADHLEYLDETGAKALAKAGTVAVLLPGAFYALREK 309 (419) T ss_dssp HHHHHHHHHHHHHTTCCBEEEESSSSCCSHHHHHHHT-T---CSEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHHTCC T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-C---CCEEECCCCCCHHHHHHHHCCCCCEEECCCCCHHHHCC T ss_conf 4677899999875498614542134431013456660-7---53000001210333221110355201014420121000 Q ss_pred -HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf -322333321056671798307866787776887588244999999999872899899999999999998425 Q gi|254780215|r 185 -YDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 185 -~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) .......... .....+-||++.... ....+...+.......+++.+++.+..+.|.-+++|. T Consensus 310 ~~~~~~~~~~~--~~~~~~~~d~~~~~~--------~~~~~~~~~~~~~~~~gls~~eal~~~T~~~A~~lGl 372 (419) T 2puz_A 310 QLPPVQALRDA--GAEIALATDCNPGTS--------PLTSLLLTMNMGATLFRMTVEECLTATTRNAAKALGL 372 (419) T ss_dssp CCCCHHHHHHH--TCCEEECCCCCSSSC--------CBCCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTC T ss_pred CHHHHHHHHHH--HCCEEEECCCCCCCC--------CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 02456777753--033234025787777--------3115999999999975999999999999999999399 No 68 >1izc_A Macrophomate synthase intermolecular diels- alderase; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 Probab=73.16 E-value=4.9 Score=19.51 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=23.3 Q ss_pred HHHHHHHHHCCCCEEEEECC-CHHHHHHHHHHHHHCC Q ss_conf 99999999869989999167-9877899999998557 Q gi|254780215|r 19 HDVIMRAHQANVLKMIAIAI-KVKDFVPLIKLCQDYP 54 (262) Q Consensus 19 ~~~i~~a~~~gv~~~i~~~~-~~~~~~~~~~l~~~~p 54 (262) ...+.++.+.|...++.+-+ +.++-+.+.+.++ || T Consensus 107 ~~~i~~~LD~Ga~GIivP~V~s~eeA~~~V~a~r-yp 142 (339) T 1izc_A 107 EVSLSTALDAGAAGIVIPHVETVEEVREFVKEMY-YG 142 (339) T ss_dssp HHHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHS-CT T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHC-CC T ss_conf 7999999717999899778699999999999740-28 No 69 >2gwn_A Dihydroorotase; zinc-binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; HET: KCX GOL; 1.85A {Porphyromonas gingivalis W83} Probab=70.26 E-value=5.7 Score=19.09 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=26.3 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 4999999999872899899999999999998425 Q gi|254780215|r 223 YVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 223 ~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ........+..-.+++.++..+..+.|.-++||. T Consensus 341 ~~~~~~~~~~~~~~~~~~~al~~~T~n~A~~lgl 374 (452) T 2gwn_A 341 HSLLALLELCNQGIFSIEEIVSKTAHIPATLFAI 374 (452) T ss_dssp THHHHHHHHHHTTSSCHHHHHHHHTHHHHHHHTB T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 3437887654327868999999999999998598 No 70 >2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A Probab=69.89 E-value=5.8 Score=19.04 Aligned_cols=133 Identities=19% Similarity=0.042 Sum_probs=67.7 Q ss_pred HHHHHHHHHHHHCCCCCEEECHHHHH-HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHH--- Q ss_conf 78999987664204420330002333-57999853100036753311214640234432103520202332211333--- Q gi|254780215|r 110 VVFLRHIEASRITGIPLVIHSRSADD-DMAAILQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFPKY--- 185 (262) Q Consensus 110 ~vF~~ql~lA~e~~~pv~iH~r~a~~-~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~--- 185 (262) .........+.+.+.++..|...... ....... .. ......|......+........+..........+... T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (421) T 2bb0_A 230 SQSRRYLQKAAEAGFGLKIHADEIDPLGGAELAG---KL-KAVSADHLVGTSDEGIKKLAEAGTIAVLLPGTTFYLGKST 305 (421) T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSSCCSHHHHHH---HT-TCSEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCC T ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH---HC-CCCEEEEECCCCHHHHHHHHHCCCCEECCCCCHHHHCCCC T ss_conf 5677888999872884254213442467788753---12-5411332023788999987630764001355102211344 Q ss_pred -HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf -22333321056671798307866787776887588244999999999872899899999999999998425 Q gi|254780215|r 186 -DALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 186 -~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ........ .......-||++... .+ ...+...........+++.+++.+..+.|.-++||. T Consensus 306 ~~~~~~~~~--~~~~~~~~~d~~~~~-~~-------~~~~~~~~~~~~~~~gls~~eal~~~T~n~A~~lgl 367 (421) T 2bb0_A 306 YARARAMID--EGVCVSLATDFNPGS-SP-------TENIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGK 367 (421) T ss_dssp CCCHHHHHH--TTCCEEECCCBBTTT-BC-------CCCHHHHHHHHHHHSCCCHHHHHHHTTHHHHHHTTC T ss_pred CCCHHHHHC--CCCCEEECCCCCCCC-CC-------CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 321001101--464022136788877-66-------568999999999975999999999999999999498 No 71 >1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10 Probab=69.80 E-value=5.8 Score=19.02 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.6 Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 44999999999872899899999999999998425 Q gi|254780215|r 222 AYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 222 ~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ..+...++.+.+..++|.+++.+..+.|.-++||. T Consensus 305 ~~l~~~~~~~~~~~gls~~eal~~~T~~~A~~lgl 339 (376) T 1o12_A 305 LFFSQAVKNFRKFTGCSITELAKVSSYNSCVELGL 339 (376) T ss_dssp CCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTC T ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 33999999999985999999999999999999689 No 72 >2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP family), structural genomics; 2.40A {Thermotoga maritima MSB8} SCOP: c.6.3.1 Probab=69.37 E-value=5.3 Score=19.30 Aligned_cols=37 Identities=19% Similarity=0.084 Sum_probs=27.3 Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEEC Q ss_conf 9168613888756522689999999986998999916 Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIA 37 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~ 37 (262) |..|-|||-...+-....++++++|.+.|+..+..+- T Consensus 20 ~~aDLH~Hs~~SDg~~~~~e~v~~A~~~Gld~iaiTD 56 (255) T 2anu_A 20 LLCDFHVHTNMSDGHLPLGEVVDLFGKHGVDVVSITD 56 (255) T ss_dssp EEEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEEEE T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEC T ss_conf 8577037868648989999999999985997899934 No 73 >2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3- epimerase, D-tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima} Probab=68.68 E-value=6.1 Score=18.87 Aligned_cols=20 Identities=25% Similarity=0.247 Sum_probs=10.6 Q ss_pred CHHHHHHHHHHHHHHHHHHH Q ss_conf 98999999999999984256 Q gi|254780215|r 238 SYEDLMEETTKNALKLFSKI 257 (262) Q Consensus 238 ~~eei~~~~~~N~~~~f~~~ 257 (262) +.++.++...+..+++..++ T Consensus 270 ~~~~~~~~s~~~lk~~l~~l 289 (290) T 2zvr_A 270 GMEEAAEIAFKTLKELIIKL 289 (290) T ss_dssp SHHHHHHHHHHHHHHHC--- T ss_pred CHHHHHHHHHHHHHHHHHHH T ss_conf 98999999999999999974 No 74 >2f46_A Hypothetical protein; 7380613, DUF442, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.41A {Neisseria meningitidis Z2491} Probab=65.71 E-value=3.7 Score=20.32 Aligned_cols=42 Identities=14% Similarity=0.202 Sum_probs=23.7 Q ss_pred CCCCCCCCCC--CCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH Q ss_conf 4677553322--11102467899998766420442033000233 Q gi|254780215|r 93 ETGLDRYHNA--HTIEEQKVVFLRHIEASRITGIPLVIHSRSAD 134 (262) Q Consensus 93 EiGLD~~~~~--~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~ 134 (262) +-||.++... .......+....+.++....++||.+||+.+. T Consensus 70 ~~gi~~~~~p~~~~~~~~~~~i~~~~~~l~~~~~pVlvHC~sG~ 113 (156) T 2f46_A 70 QAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGT 113 (156) T ss_dssp GGTCCEEEECCCCTTTCCHHHHHHHHHHHHTSCSSEEEECSSSH T ss_pred HCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCC T ss_conf 74995489624677766489999999998436897898818997 No 75 >1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A Probab=65.69 E-value=7 Score=18.49 Aligned_cols=214 Identities=11% Similarity=0.090 Sum_probs=98.8 Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCHH-------HHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCC----HHHHHHHHHHC Q ss_conf 26899999999869989999167987-------789999999855723321124454433-4467----88998853100 Q gi|254780215|r 16 EDRHDVIMRAHQANVLKMIAIAIKVK-------DFVPLIKLCQDYPSSIFCSVGTHPCHA-HEEN----EVLVDELVCLA 83 (262) Q Consensus 16 ~d~~~~i~~a~~~gv~~~i~~~~~~~-------~~~~~~~l~~~~p~~i~~a~GiHP~~~-~~~~----~~~~~~l~~l~ 83 (262) .++++.++.+.+.|...+=....+.. +.....+..++++-.+ .++|+..- ...+ +..++.+++.+ T Consensus 14 ~~l~~~l~~aa~~G~~~iEl~~~~~~~~~~~~~~~~~l~~~~~~~gl~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~i 90 (278) T 1i60_A 14 SNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKP---LALNALVFFNNRDEKGHNEIITEFKGMM 90 (278) T ss_dssp CCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEE---EEEEEEECCSSCCHHHHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEE---EEEECCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 9999999999995979999676766600148653999999999809939---9983676778999899999999999999 Q ss_pred CCC-----CCCEECCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHCCCCCEEEC--H-----HHHHHHHHHHHHHHHCCC Q ss_conf 133-----3210044677553322--1110246789999876642044203300--0-----233357999853100036 Q gi|254780215|r 84 SHP-----RVVAIGETGLDRYHNA--HTIEEQKVVFLRHIEASRITGIPLVIHS--R-----SADDDMAAILQEEMKKGP 149 (262) Q Consensus 84 ~~~-----~~~aIGEiGLD~~~~~--~~~e~Q~~vF~~ql~lA~e~~~pv~iH~--r-----~a~~~~l~iL~~~~~~~~ 149 (262) .-. +.+.+ ..|.+..... ..++.-.+.|++..++|+++|..+.|+- . ....++.++++.. .... T Consensus 91 ~~a~~lG~~~i~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~iE~~~~~~~~~~~~~~~~~li~~~-~~~~ 168 (278) T 1i60_A 91 ETCKTLGVKYVVA-VPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTV-NRDN 168 (278) T ss_dssp HHHHHHTCCEEEE-ECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHHHH-CCTT T ss_pred HHHHHCCCCCEEE-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHH-HHCC T ss_conf 9999839996045-8898877789899999999999999999986198448984345776258889977899875-2201 Q ss_pred CCCCC---EECCCCHHHHHHHHCCCCE---EECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHH Q ss_conf 75331---1214640234432103520---20233221133322333321056671798307866787776887588244 Q gi|254780215|r 150 FPFVI---HCFSSSQKLADICLELGGY---ISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAY 223 (262) Q Consensus 150 ~~~i~---H~FsG~~~~~~~~l~~g~y---~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~ 223 (262) .++.+ |++.+.....+-+...+-+ +-++...-.+. ... ..-+|+ . |-.|.. . T Consensus 169 vg~~~D~~h~~~~~~~~~~~~~~~~~~i~~vHl~D~~~~~~-~~~------~~~~~~---------~--~G~G~i----d 226 (278) T 1i60_A 169 VGLVLDSFHFHAMGSNIESLKQADGKKIFIYHIDDTEDFPI-GFL------TDEDRV---------W--PGQGAI----D 226 (278) T ss_dssp EEEEEEHHHHHHTTCCHHHHHTSCGGGEEEEEECEECCCCT-TTC------CGGGEE---------S--TTSSSS----C T ss_pred CCEEECHHHHHHCCCCHHHHHHHCCHHEEEEEEEECCCCCC-CCC------CCCCCC---------C--CCCCCC----C T ss_conf 23020558876469999999986111066899953777776-644------533565---------8--989543----8 Q ss_pred HHHHHHHHHH---------------HHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 9999999998---------------72899899999999999998425 Q gi|254780215|r 224 VVNTAKALAK---------------EKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 224 i~~~~~~iA~---------------i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ...+++.+.+ .++++.++.++...++.++++.| T Consensus 227 ~~~i~~~L~~~gy~G~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (278) T 1i60_A 227 LDAHLSALKEIGFSDVVSVELFRPEYYKLTAEEAIQTAKKTTVDVVSK 274 (278) T ss_dssp HHHHHHHHHHTTCCSEEEECCCCGGGGGSCHHHHHHHHHHHHHHHHTT T ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 999999999849971799984682013379999999999999999999 No 76 >2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A* Probab=64.32 E-value=5.4 Score=19.21 Aligned_cols=139 Identities=11% Similarity=0.109 Sum_probs=75.0 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEC---HH-------HH--------HHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHH Q ss_conf 0246789999876642044203300---02-------33--------357999853100036753311214640234432 Q gi|254780215|r 106 EEQKVVFLRHIEASRITGIPLVIHS---RS-------AD--------DDMAAILQEEMKKGPFPFVIHCFSSSQKLADIC 167 (262) Q Consensus 106 e~Q~~vF~~ql~lA~e~~~pv~iH~---r~-------a~--------~~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~ 167 (262) .....++...++++.|.|+|+.+|. |+ +. ..+.+++.++ +..++|+-|-+ ...-.++ T Consensus 237 ~~~~~~~~~l~~~~~e~glvmQLH~Gv~Rn~n~~~~~~Gd~~g~~~l~~L~~l~~~~---p~~k~il~~Ld--~~~~~eL 311 (437) T 2qee_A 237 NRGRIIRDCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLREY---PNNKFLVTMLS--RENQHEL 311 (437) T ss_dssp HHHHHHHHTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHHHC---TTSCEEEEESC--GGGHHHH T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHC---CCCCEEEEECC--CCCHHHH T ss_conf 599999999999998679858873277668774444368975544899999998538---99867999799--8757999 Q ss_pred HC---------CC--CEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH-HHHHHHHH- Q ss_conf 10---------35--2020233221133322333321056671798307866787776887588244999-99999987- Q gi|254780215|r 168 LE---------LG--GYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVN-TAKALAKE- 234 (262) Q Consensus 168 l~---------~g--~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~-~~~~iA~i- 234 (262) .- +| |||+=++... + +.++..+..+|...+-.=|||--+.--.+|- .+-.+ .+..+++- T Consensus 312 a~lAg~fpnv~lG~~WWF~Dsp~gI--~-~~l~~~~e~l~~~fvGm~sDsR~~~s~~~r~-----e~fRriL~~vl~e~~ 383 (437) T 2qee_A 312 VVLARKFSNLMIFGCWWFMNNPEII--N-EMTRMRMEMLGTSFIPQHSDARVLEQLIYKW-----HHSKSIIAEVLIDKY 383 (437) T ss_dssp HHHHHHCTTEEEBCCCGGGCSHHHH--H-HHHHHHHHHHTTCSBCCCCCCSBTTHHHHHH-----HHHHHHHHHHHHHHH T ss_pred HHHHHHCCCCCCCCCEEECCCHHHH--H-HHHHHHHHHHCCCCCCCCCCCHHHHCCCHHH-----HHHHHHHHHHHHHHH T ss_conf 9997218143037840245598999--9-9999999750302045235513551123699-----999999999999999 Q ss_pred -----HCCC--HHH----HHHHHHHHHHHHHHHH Q ss_conf -----2899--899----9999999999984256 Q gi|254780215|r 235 -----KDVS--YED----LMEETTKNALKLFSKI 257 (262) Q Consensus 235 -----~~~~--~ee----i~~~~~~N~~~~f~~~ 257 (262) +|.+ .++ +.+..+.|+.+|||.= T Consensus 384 ~~~~~~g~~~~~~~i~~~~~~l~~~n~~~~~g~~ 417 (437) T 2qee_A 384 DDILQAGWEVTEEEIKRDVADLFSRNFWRFVGRN 417 (437) T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHTHHHHHHHTCC T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 9998659987499999999999887199980768 No 77 >1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A* Probab=63.71 E-value=7.6 Score=18.24 Aligned_cols=65 Identities=22% Similarity=0.247 Sum_probs=41.7 Q ss_pred HHCCCCCCEEEEECCCCCCCCC--C----CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 2105667179830786678777--6----887588244999999999872899899999999999998425 Q gi|254780215|r 192 ARGIPMDRVLVETDSPYIVPVS--C----QGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 192 v~~iPldriLlETDsP~l~p~~--~----r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ...++..++.+-+++.-..+.. . ......+..+......++.-.+++.+++.+..+.|.-+++|. T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~eal~~aT~~~A~~lgl 342 (390) T 1onw_A 272 QAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNL 342 (390) T ss_dssp HTTCCGGGEEEECCBTCC-------------CCCCSHHHHHHHHHHHHHHCCCHHHHHGGGTHHHHHHTTC T ss_pred HHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 84377443110014667642000012334456652544999999999986999999999999999999599 No 78 >1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6 Probab=63.53 E-value=4.6 Score=19.67 Aligned_cols=30 Identities=23% Similarity=0.239 Sum_probs=23.1 Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 999999872899899999999999998425 Q gi|254780215|r 227 TAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 227 ~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ......+..+++.+++.+..+.|.-+++|. T Consensus 345 ~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 374 (458) T 1gkr_A 345 MLTNGVNKGRLSLERLVEVMCEKPAKLFGI 374 (458) T ss_dssp HHHHTGGGTSSCHHHHHHHHTHHHHHHHTC T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHCCC T ss_conf 987663428989999999985889998498 No 79 >1odz_A Mannanase A; hydrolase, family 26, glycoside-hydrolase, glycosynthase, manno-oligosaccharide; HET: MAN BMA; 1.4A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1r7o_A* 2whm_A* 1j9y_A 1gvy_A* 1gw1_A* Probab=62.33 E-value=8 Score=18.08 Aligned_cols=119 Identities=9% Similarity=-0.016 Sum_probs=51.5 Q ss_pred CCCCCCCCCCCCCCHHHHHHHH----HHHHHHHHCCCCCEEECHHH--------------HHHHHHHHHHHHHCCCCCCC Q ss_conf 4467755332211102467899----99876642044203300023--------------33579998531000367533 Q gi|254780215|r 92 GETGLDRYHNAHTIEEQKVVFL----RHIEASRITGIPLVIHSRSA--------------DDDMAAILQEEMKKGPFPFV 153 (262) Q Consensus 92 GEiGLD~~~~~~~~e~Q~~vF~----~ql~lA~e~~~pv~iH~r~a--------------~~~~l~iL~~~~~~~~~~~i 153 (262) -=||+|.|-...+...+...|. ...++|.+.+||+.|-.-+. .+.++..++..........+ T Consensus 241 DivG~D~Y~~~~~~~~~~~~~~~~~~~~~~~a~~~gKp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~p~~~~i~y~ 320 (386) T 1odz_A 241 DVLGFDTYGPVADNADWFRNVVANAALVARMAEARGKIPVISGIGIRAPDIEAGLYDNQWYRKLISGLKADPDAREIAFL 320 (386) T ss_dssp SEECCEEEECSSSCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEECHHHHHTTCCCTTHHHHHHHHHHHSTTGGGCSEE T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEE T ss_conf 89875245888877028899999999999998736991899512887871441676764899999998738121140599 Q ss_pred CEECCCCH-HHHHHHH-CCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC Q ss_conf 11214640-2344321-0352020233221133322333321056671798307866787 Q gi|254780215|r 154 IHCFSSSQ-KLADICL-ELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVP 211 (262) Q Consensus 154 ~H~FsG~~-~~~~~~l-~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p 211 (262) +-|.+-.. ....... ..++|--+.+.-+ .......+.++.+--+..|.+.|-|.|.- T Consensus 321 ~~W~N~~~~~~~~~~~~~~~~~~p~~~~~~-~g~~~~~dF~~~y~~~~~lf~~~lp~lY~ 379 (386) T 1odz_A 321 LVWRNAPQGVPGPNGTQVPHYWVPANRPEN-INNGTLEDFQAFYADEFTAFNRDIEQVYQ 379 (386) T ss_dssp EECCCCTTCEEC--CCEECCCCSCCSSHHH-HHTSHHHHHHHHHHSTTEECGGGCCSCSC T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHCCCCCEEHHHCHHHHH T ss_conf 997167666656666666653555666565-67533899999977985111655735652 No 80 >1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2 Probab=62.00 E-value=8.1 Score=18.04 Aligned_cols=20 Identities=5% Similarity=0.089 Sum_probs=9.8 Q ss_pred HHHHHHHCCCCCCEEEEECC Q ss_conf 23333210566717983078 Q gi|254780215|r 187 ALRAIARGIPMDRVLVETDS 206 (262) Q Consensus 187 ~~~e~v~~iPldriLlETDs 206 (262) ++.+.++.-...-|+.|+.. T Consensus 244 ~l~~~ik~~~v~~if~e~~~ 263 (321) T 1xvl_A 244 TVIEEVKTNNVPTIFCESTV 263 (321) T ss_dssp HHHHHHHTTTCSEEEEETTS T ss_pred HHHHHHHHCCCCEEEECCCC T ss_conf 99999986498389972898 No 81 >3iar_A Adenosine deaminase; purine metabolism, structural genomics, structural genomics consortium, SGC, acetylation, disease mutation; HET: 3D1; 1.52A {Homo sapiens} PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 1a4m_A* 1a4l_A* ... Probab=61.77 E-value=8.2 Score=18.02 Aligned_cols=123 Identities=12% Similarity=0.109 Sum_probs=73.8 Q ss_pred HHHHHHHHHHCCCCCEEECHHH--HHHHHHHHHHHHHCCCCCCCCEECCC--CHHHHHHHHCCCCEEECCCCCCHH---- Q ss_conf 9999876642044203300023--33579998531000367533112146--402344321035202023322113---- Q gi|254780215|r 112 FLRHIEASRITGIPLVIHSRSA--DDDMAAILQEEMKKGPFPFVIHCFSS--SQKLADICLELGGYISFTGMITFP---- 183 (262) Q Consensus 112 F~~ql~lA~e~~~pv~iH~r~a--~~~~l~iL~~~~~~~~~~~i~H~FsG--~~~~~~~~l~~g~y~S~~g~i~~~---- 183 (262) |....+.|++.++++.+|+=.. ...+.+.+.. ....-|=|++.- +.+.++.+.+.|.-+-+.+..... T Consensus 194 ~~~~f~~a~~~gl~~t~HaGE~~~~~~i~~ai~~----l~a~RIGHG~~~~~d~~ll~~l~~~~I~lEiCPtSN~~l~~~ 269 (367) T 3iar_A 194 HVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDI----LKTERLGHGYHTLEDQALYNRLRQENMHFEICPWSSYLTGAW 269 (367) T ss_dssp HHHHHHHHHHHTCEEEEEESSSSCHHHHHHHHHT----SCCSEEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTSSS T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH----CCCCEECCCEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCC T ss_conf 9999999998388324323557880669999985----487450352104569899999876186289735666545667 Q ss_pred ---HHHHHHHHHH-CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf ---3322333321-05667179830786678777688758824499999999987289989999999999999 Q gi|254780215|r 184 ---KYDALRAIAR-GIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALK 252 (262) Q Consensus 184 ---~~~~~~e~v~-~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~ 252 (262) +..-++...+ .+ .+-+-||-|-+.- ..+..-+..+++..+++.+++.+. .+|+.+ T Consensus 270 ~~~~~HP~~~l~~~Gv---~vsi~TDDp~~f~----------t~L~~Ey~~a~~~~~ls~~el~~l-~~nsi~ 328 (367) T 3iar_A 270 KPDTEHAVIRLKNDQA---NYSLNTDDPLIFK----------STLDTDYQMTKRDMGFTEEEFKRL-NINAAK 328 (367) T ss_dssp CTTSCCHHHHHHHTTC---CEEECCBSHHHHT----------CCHHHHHHHHHHHHCCCHHHHHHH-HHHHHH T ss_pred CCHHCCCCCHHHHCCC---EEEECCCCCCCCC----------CCHHHHHHHHHHHHCCCHHHHHHH-HHHHHH T ss_conf 8521084218986797---6998589950018----------988999999999829599999999-999999 No 82 >1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2 Probab=60.63 E-value=8.6 Score=17.89 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=32.1 Q ss_pred HHHHHHHHHCCCCCCCCEECCCCH-HHHHHHHCCCC-EEECCCCCCHHHHHHHHHHHHC Q ss_conf 999853100036753311214640-23443210352-0202332211333223333210 Q gi|254780215|r 138 AAILQEEMKKGPFPFVIHCFSSSQ-KLADICLELGG-YISFTGMITFPKYDALRAIARG 194 (262) Q Consensus 138 l~iL~~~~~~~~~~~i~H~FsG~~-~~~~~~l~~g~-y~S~~g~i~~~~~~~~~e~v~~ 194 (262) +++|++....-+.+.++|+=||.. +++++++++|. .+-|+..+...=...+|+.+.. T Consensus 191 ~~~l~~I~~~~~vPLVLHGgSG~p~e~i~~ai~~Gi~KiNi~T~l~~a~~~~~~~~l~~ 249 (286) T 1gvf_A 191 FQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAE 249 (286) T ss_dssp HHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH T ss_pred CHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHH T ss_conf 03566765246998674589999768999999769289995728999999999999986 No 83 >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} Probab=60.10 E-value=8.2 Score=18.01 Aligned_cols=38 Identities=13% Similarity=0.205 Sum_probs=25.2 Q ss_pred CHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH Q ss_conf 10246789999876642044203300023335799985 Q gi|254780215|r 105 IEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQ 142 (262) Q Consensus 105 ~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~ 142 (262) ...|..-|...++-+.+.+.+|.|||+.+.+.+--++- T Consensus 71 ~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RSg~v~~ 108 (151) T 2img_A 71 APDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA 108 (151) T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHH T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH T ss_conf 99999999999999986599289986898876799999 No 84 >2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A Probab=59.81 E-value=8.8 Score=17.79 Aligned_cols=19 Identities=16% Similarity=0.340 Sum_probs=10.4 Q ss_pred HHHHHCCCCEEEEECCCHHHH Q ss_conf 999986998999916798778 Q gi|254780215|r 23 MRAHQANVLKMIAIAIKVKDF 43 (262) Q Consensus 23 ~~a~~~gv~~~i~~~~~~~~~ 43 (262) .+..++. -++.+|...+.| T Consensus 44 ~~l~~Ad--lvv~~G~~~E~~ 62 (284) T 2prs_A 44 KRLQNAD--LVVWVGPEMEAF 62 (284) T ss_dssp HHHHHCS--EEEECCTTTCGG T ss_pred HHHHCCC--EEEECCCCHHHH T ss_conf 9996699--999948541778 No 85 >1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformational change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 1k6w_A 1k70_A 3g77_A Probab=58.99 E-value=9.1 Score=17.70 Aligned_cols=27 Identities=4% Similarity=-0.044 Sum_probs=19.4 Q ss_pred HHHHHHHHHHHHHHHCCCCCEEECHHH Q ss_conf 246789999876642044203300023 Q gi|254780215|r 107 EQKVVFLRHIEASRITGIPLVIHSRSA 133 (262) Q Consensus 107 ~Q~~vF~~ql~lA~e~~~pv~iH~r~a 133 (262) ......+....+|.+..++...|+... T Consensus 196 ~~~~~~~~~~~~a~~~~~~~~~~~~~~ 222 (430) T 1ra0_A 196 YGVESLHKTFALAQKYDRLIDVHCDEI 222 (430) T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECCS T ss_pred HHHHHHHHHHHHHHHHCCCEEEEHHHH T ss_conf 026679999999986244201102321 No 86 >2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A Probab=58.79 E-value=5.9 Score=18.98 Aligned_cols=31 Identities=16% Similarity=0.142 Sum_probs=23.2 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 9999999872899899999999999998425 Q gi|254780215|r 226 NTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 226 ~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ........-.+++.+++.+..+.|.-+.+|. T Consensus 375 ~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl 405 (501) T 2vm8_A 375 VIWDKAVVTGKMDENQFVAVTSTNAAKVFNL 405 (501) T ss_dssp HHHHHHTTTTSSCHHHHHHHHTHHHHHHHTC T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC T ss_conf 9999999827999999999997999998198 No 87 >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Probab=58.03 E-value=9.5 Score=17.60 Aligned_cols=122 Identities=9% Similarity=0.081 Sum_probs=62.7 Q ss_pred HHHHHHHHHH--CCCCEEEEEC-----CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC----C- Q ss_conf 8999999998--6998999916-----79877899999998557233211244544334467889988531001----3- Q gi|254780215|r 18 RHDVIMRAHQ--ANVLKMIAIA-----IKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLAS----H- 85 (262) Q Consensus 18 ~~~~i~~a~~--~gv~~~i~~~-----~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~----~- 85 (262) +.++++.... .....++..| .+.+++....+..++.+-.++...|=|=.. ....+.+..... . T Consensus 28 l~~~~~~i~~~~~~~D~vv~tGDl~~~~~~~~y~~~~~~l~~l~~p~~~v~GNHD~~-----~~~~~~~~~~~~~~~~~~ 102 (274) T 3d03_A 28 NADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGNHDDK-----ALFLEYLQPLCPQLGSDA 102 (274) T ss_dssp HHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCTTSCH-----HHHHHHHGGGSGGGCSCG T ss_pred HHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHH-----HHHHHHHHHHCCCCCCCC T ss_conf 999999998328999999988757889988999999999987288789967886346-----788987654301235677 Q ss_pred CCC---CEEC---CCCCCCCCC----CCCCHHHHHHHHHHHHHHHHCCCCCEEECH--------------HHHHHHHHHH Q ss_conf 332---1004---467755332----211102467899998766420442033000--------------2333579998 Q gi|254780215|r 86 PRV---VAIG---ETGLDRYHN----AHTIEEQKVVFLRHIEASRITGIPLVIHSR--------------SADDDMAAIL 141 (262) Q Consensus 86 ~~~---~aIG---EiGLD~~~~----~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r--------------~a~~~~l~iL 141 (262) ... +..| =|+||-... ..-.+.|.+.++++|+-+.+....|++|-- ....++.++| T Consensus 103 ~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~~l~wL~~~L~~~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~l~~~l 182 (274) T 3d03_A 103 NNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALV 182 (274) T ss_dssp GGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHTTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHH T ss_pred CCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH T ss_conf 86269995487589842577678876401599999999998751066349999438746788654542466899999999 Q ss_pred HHH Q ss_conf 531 Q gi|254780215|r 142 QEE 144 (262) Q Consensus 142 ~~~ 144 (262) +++ T Consensus 183 ~~~ 185 (274) T 3d03_A 183 ERF 185 (274) T ss_dssp HHC T ss_pred HHC T ss_conf 837 No 88 >3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} Probab=55.38 E-value=10 Score=17.31 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=24.3 Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 999999999872899899999999999998425 Q gi|254780215|r 224 VVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 224 i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) .......+.+-.+++.+++.+.++.|.-++||. T Consensus 362 ~~~~~~~~~~~~~~~~~~al~~~T~n~A~~lgl 394 (473) T 3e74_A 362 MDVMFDEAVQKRGMSLPMFGKLMATNAADIFGL 394 (473) T ss_dssp HHHHHHHHTTTTCCCHHHHHHHHTHHHHHHTTC T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 899999999828998999999997999998099 No 89 >2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic degradation; 1.60A {Escherichia coli} PDB: 2v5k_A Probab=55.09 E-value=11 Score=17.28 Aligned_cols=140 Identities=15% Similarity=0.209 Sum_probs=66.9 Q ss_pred HHHHHHHHHCCCCEEEEECC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--------CCCHHHHHHHHH--HCCC-- Q ss_conf 99999999869989999167-9877899999998557233211244544334--------467889988531--0013-- Q gi|254780215|r 19 HDVIMRAHQANVLKMIAIAI-KVKDFVPLIKLCQDYPSSIFCSVGTHPCHAH--------EENEVLVDELVC--LASH-- 85 (262) Q Consensus 19 ~~~i~~a~~~gv~~~i~~~~-~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~--------~~~~~~~~~l~~--l~~~-- 85 (262) ...+.++.+.|...++.+-+ +.++-+++.+.++ ||..= .=|+=|..+. ++....-+++.- .++. T Consensus 101 ~~~i~r~LD~Ga~GIivP~V~s~eea~~~v~~~k-ypP~G--~RG~g~~~~~~~~~~~~~~~~~~~n~~~lvi~qIEt~e 177 (287) T 2v5j_A 101 PVQIKQLLDVGTQTLLVPMVQNADEAREAVRATR-YPPAG--IRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETRE 177 (287) T ss_dssp HHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTS-CTTTS--CCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHH T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCC-CCCCC--CCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCHH T ss_conf 9999999837998679467599999999998371-79999--89998642334556674067787330248864125599 Q ss_pred -----CCCCEECCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCEEEC---HHHHHHHHHHHHHHHHCCCCCCCCEE Q ss_conf -----332100446775533-221110246789999876642044203300---02333579998531000367533112 Q gi|254780215|r 86 -----PRVVAIGETGLDRYH-NAHTIEEQKVVFLRHIEASRITGIPLVIHS---RSADDDMAAILQEEMKKGPFPFVIHC 156 (262) Q Consensus 86 -----~~~~aIGEiGLD~~~-~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~---r~a~~~~l~iL~~~~~~~~~~~i~H~ 156 (262) +++++| =|+|... ... +|+..++.|=.... +++.+++++..++. + ...-. T Consensus 178 avenldeI~av--~GvD~i~iGP~-------------DLS~slG~pg~~~~p~v~~ai~~v~~~~~~~---g---k~~G~ 236 (287) T 2v5j_A 178 AMKNLPQILDV--EGVDGVFIGPA-------------DLSADMGYAGNPQHPEVQAAIEQAIVQIRES---G---KAPGI 236 (287) T ss_dssp HHHTHHHHHTS--TTEEEEEECHH-------------HHHHHTTSTTCCCSHHHHHHHHHHHHHHHHT---T---SEEEE T ss_pred HHHHHHHHHCC--CCCCEEEECHH-------------HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC---C---CCEEE T ss_conf 99989998644--78876998928-------------8875317888999878999999999999985---9---95247 Q ss_pred CCCCHHHHHHHHCCCC-EEECCCCCCH Q ss_conf 1464023443210352-0202332211 Q gi|254780215|r 157 FSSSQKLADICLELGG-YISFTGMITF 182 (262) Q Consensus 157 FsG~~~~~~~~l~~g~-y~S~~g~i~~ 182 (262) |.++.+.+++++++|+ ++.++..+.+ T Consensus 237 ~~~~~~~~~~~~~~G~~~i~~g~D~~~ 263 (287) T 2v5j_A 237 LIANEQLAKRYLELGALFVAVGVDTTL 263 (287) T ss_dssp ECCCHHHHHHHHHTTCSEEEEEEHHHH T ss_pred ECCCHHHHHHHHHCCCCEEEEHHHHHH T ss_conf 579999999999839989997589999 No 90 >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, hydrolase; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Probab=54.78 E-value=11 Score=17.25 Aligned_cols=154 Identities=13% Similarity=0.094 Sum_probs=72.2 Q ss_pred CHHHHHHHHHH--CCCCEEEEECC-----CHHHHHHHHHHHH----HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC-- Q ss_conf 68999999998--69989999167-----9877899999998----55723321124454433446788998853100-- Q gi|254780215|r 17 DRHDVIMRAHQ--ANVLKMIAIAI-----KVKDFVPLIKLCQ----DYPSSIFCSVGTHPCHAHEENEVLVDELVCLA-- 83 (262) Q Consensus 17 d~~~~i~~a~~--~gv~~~i~~~~-----~~~~~~~~~~l~~----~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~-- 83 (262) .+.++++...+ ...+.++..|- +++++....++.+ +.+-.++...|=|=. .......+.... T Consensus 52 ~l~~~l~~i~~~~~~pD~vvitGDl~~~g~~~~y~~~~~~l~~~~~~~~~pv~~v~GNHD~-----~~~~~~~~~~~~~~ 126 (330) T 3ib7_A 52 RLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDD-----RAELRKFLLDEAPS 126 (330) T ss_dssp HHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEECCCTTSC-----HHHHHHHHHCCCCC T ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC-----HHHHHHHHCCCCCC T ss_conf 9999999998229899999989877899999999999999999875249977995787764-----45554431013666 Q ss_pred --CCCCCC---EECCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHCCCCCEEEC-----H---------HHHHHHHHH Q ss_conf --133321---004467755332----21110246789999876642044203300-----0---------233357999 Q gi|254780215|r 84 --SHPRVV---AIGETGLDRYHN----AHTIEEQKVVFLRHIEASRITGIPLVIHS-----R---------SADDDMAAI 140 (262) Q Consensus 84 --~~~~~~---aIGEiGLD~~~~----~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~-----r---------~a~~~~l~i 140 (262) ....+. .+.-++||.... ..-.+.|.+.++++|+-+.....-|.+|- . .....+.++ T Consensus 127 ~~~~~~~~~~~~~~~~~ldt~~~~~~~G~~~~~ql~wL~~~L~~~~~~~~iv~~HHpp~~~~~~~~~~~~~~~~~~l~~l 206 (330) T 3ib7_A 127 MAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRV 206 (330) T ss_dssp CSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTTSCCTTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHH T ss_pred CCCCEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH T ss_conf 67630478707832664366667876885599999999998864778876999816985677753344334447999999 Q ss_pred HHHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCH Q ss_conf 853100036753311214640234432103520202332211 Q gi|254780215|r 141 LQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITF 182 (262) Q Consensus 141 L~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~ 182 (262) ++.+.......+++|... ...-.|..+..+|..++ T Consensus 207 l~~~~v~~vl~GH~H~~~-------~~~~~Gi~~~~~pst~~ 241 (330) T 3ib7_A 207 LRGTDVRAILAGHLHYST-------NATFVGIPVSVASATCY 241 (330) T ss_dssp HTTSSEEEEEECSSSSCE-------EEEETTEEEEECCCSSC T ss_pred HHHCCCCEEEECCCCCCC-------EEEECCEEEEEECCCHH T ss_conf 974698199977788049-------37999999999696253 No 91 >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* Probab=54.68 E-value=4.5 Score=19.74 Aligned_cols=41 Identities=15% Similarity=0.226 Sum_probs=23.2 Q ss_pred CCCCCCCCC----CCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH Q ss_conf 446775533----2211102467899998766420442033000233 Q gi|254780215|r 92 GETGLDRYH----NAHTIEEQKVVFLRHIEASRITGIPLVIHSRSAD 134 (262) Q Consensus 92 GEiGLD~~~----~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~ 134 (262) .+.||+|.. ...+...|...|.+.++- .-++||.+||+.+. T Consensus 64 ~~~Gi~~~~iPv~~~~p~~e~v~~~~~~i~~--~~~~pVlVHC~sG~ 108 (157) T 3gxh_A 64 TQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQ--HKGKDVLVHCLANY 108 (157) T ss_dssp HHTTCEEEECCCCTTSCCHHHHHHHHHHHHH--TTTSCEEEECSBSH T ss_pred HHCCCCEEECCCCCCCCCHHHHHHHHHHHHH--CCCCCEEEECCCCC T ss_conf 9729704757886679599999999999986--36994898879998 No 92 >2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase, lysine biosynthesis; 1.50A {Hahella chejuensis} Probab=52.94 E-value=11 Score=17.06 Aligned_cols=147 Identities=11% Similarity=0.071 Sum_probs=73.1 Q ss_pred HHHHHHHHHHCCCCEEEEECC-------CHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC Q ss_conf 899999999869989999167-------98778999999985-5723321124454433446788998853100133321 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAI-------KVKDFVPLIKLCQD-YPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVV 89 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~-------~~~~~~~~~~l~~~-~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~ 89 (262) +...++...+.|+..+++.|+ +.++..+..+.+.+ -++.+...+|+=- .......++.+.+.+..+- T Consensus 23 ~~~~i~~l~~~Gv~gi~v~G~tGE~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~~-----~~~~~ai~~a~~a~~~G~d 97 (297) T 2rfg_A 23 LAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS-----NNPVEAVRYAQHAQQAGAD 97 (297) T ss_dssp HHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-----SSHHHHHHHHHHHHHHTCS T ss_pred HHHHHHHHHHCCCCEEEECEECCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCC-----HHHHHHHHHHHHHHHHCCC T ss_conf 99999999977999999792331453489999999999989971899709996886-----0199999999999980999 Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHH------HHHHHHHHHHHHHCC--------------- Q ss_conf 00446775533221110246789999876642044203300023------335799985310003--------------- Q gi|254780215|r 90 AIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSA------DDDMAAILQEEMKKG--------------- 148 (262) Q Consensus 90 aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a------~~~~l~iL~~~~~~~--------------- 148 (262) +| =+...+|... + +.++++..-++|...++|++++.--. ..++++.|.+....- T Consensus 98 ~i-~~~~P~~~~~-~---~~~~~~~f~~i~~a~~iPi~lYn~P~~~g~~l~~~~~~~L~~~~nivg~K~~~~~~~~~~~~ 172 (297) T 2rfg_A 98 AV-LCVAGYYNRP-S---QEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGVKDATTDLARISRE 172 (297) T ss_dssp EE-EECCCTTTCC-C---HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECSCCTTHHHHH T ss_pred EE-ECCCCCCCCC-C---HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHH T ss_conf 89-7068878898-9---99999999999986799789997874147789999999985189989870688858899999 Q ss_pred --CCCCCCEECCCCHHHHHHHHCCCCEE Q ss_conf --67533112146402344321035202 Q gi|254780215|r 149 --PFPFVIHCFSSSQKLADICLELGGYI 174 (262) Q Consensus 149 --~~~~i~H~FsG~~~~~~~~l~~g~y~ 174 (262) ..+--+.+|+|+...+-..+.+|+-= T Consensus 173 ~~~~~~~~~~~~G~~~~~~~~l~~G~~G 200 (297) T 2rfg_A 173 RMLINKPFSFLSGDDMTAIAYNASGGQG 200 (297) T ss_dssp HTTCCSCCEEEESCGGGHHHHHHTTCCE T ss_pred HHHCCCCCEEEECCHHHHHHHHHCCCEE T ss_conf 8741688559836617679999669767 No 93 >3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structural genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis} Probab=52.54 E-value=12 Score=17.02 Aligned_cols=126 Identities=10% Similarity=0.005 Sum_probs=65.3 Q ss_pred CHHHHHHHHHHCCCCEEEEECC--------CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHCC--- Q ss_conf 6899999999869989999167--------987789999999855723321124454433446-7889988531001--- Q gi|254780215|r 17 DRHDVIMRAHQANVLKMIAIAI--------KVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEE-NEVLVDELVCLAS--- 84 (262) Q Consensus 17 d~~~~i~~a~~~gv~~~i~~~~--------~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~-~~~~~~~l~~l~~--- 84 (262) .++++++.+.+.|...+=.-+. +....++.++..+.+.-. .++++.|-...... .+..++.++..+. T Consensus 16 sl~e~l~~a~~~G~~gIEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~ 94 (286) T 3dx5_A 16 SFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLE-ITMISDYLDISLSADFEKTIEKCEQLAILAN 94 (286) T ss_dssp CHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCC-EEEEECCCCCSTTSCHHHHHHHHHHHHHHHH T ss_pred CHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCE-EEEEECCCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 999999999981999999825566534545878899999999965997-9998467666774328999999999999999 Q ss_pred ---CCCCC-EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH-----HHHHHHHHHHHHH Q ss_conf ---33321-004467755332211102467899998766420442033000-----2333579998531 Q gi|254780215|r 85 ---HPRVV-AIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR-----SADDDMAAILQEE 144 (262) Q Consensus 85 ---~~~~~-aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r-----~a~~~~l~iL~~~ 144 (262) -+.++ ..|..|=.. .....++.=.+.+++..++|++++..+.+|.- ....++.++++.. T Consensus 95 ~lG~~~v~v~~g~~~~~~-~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~h~~~~~~~~~~~~~li~~v 162 (286) T 3dx5_A 95 WFKTNKIRTFAGQKGSAD-FSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEV 162 (286) T ss_dssp HHTCCEEEECSCSSCGGG-SCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHH T ss_pred HHCCCEEEECCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHC T ss_conf 809899998679888543-70999999999999999887614968999841361558899999999752 No 94 >3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; two-domain protein containing predicted PHP-like metal-depen phosphoesterase; 2.20A {Bacteroides vulgatus atcc 8482} Probab=50.30 E-value=9.8 Score=17.50 Aligned_cols=36 Identities=14% Similarity=-0.033 Sum_probs=26.9 Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEE Q ss_conf 916861388875652268999999998699899991 Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAI 36 (262) Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~ 36 (262) |-.|-|||-...+-....++++++|.+.|+..+.++ T Consensus 19 ~~~DLH~HT~~SDG~~~p~~lv~~a~~~Gl~~iAiT 54 (343) T 3e38_A 19 LKCDFHMHSVFSDGLVWPTVRVDEAYRDGLDAISLT 54 (343) T ss_dssp EEEECCBCCTTTTCSBCHHHHHHHHHHTTCSEECCE T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC T ss_conf 987778583732787879999999998199999988 No 95 >2uz9_A Guanine deaminase; zinc, hydrolase, purine metabolism, guanine aminohydrolase; HET: XAN; 2.3A {Homo sapiens} SCOP: b.92.1.4 c.1.9.9 PDB: 3e0l_A Probab=48.34 E-value=13 Score=16.59 Aligned_cols=141 Identities=10% Similarity=0.010 Sum_probs=62.1 Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHC-------------CCCCCCCEECCCCHHHHHHHHCCCCEEE Q ss_conf 678999987664204420330002333579998531000-------------3675331121464023443210352020 Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKK-------------GPFPFVIHCFSSSQKLADICLELGGYIS 175 (262) Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~-------------~~~~~i~H~FsG~~~~~~~~l~~g~y~S 175 (262) ...+......+.....++..|......+...+...+... .......|+.--..+........+.... T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (476) T 2uz9_A 242 ETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIA 321 (476) T ss_dssp HHHHHHHHHHHHHHTCEEEEEESCSHHHHHHHHHHSTTSSSHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEE T ss_pred HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHCCCCCC T ss_conf 66777888876523752000232013689999986502665166654320137653055578740001123332165333 Q ss_pred CCCCCCHHHH-HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH---HH-----HCCCHHHHHHHH Q ss_conf 2332211333-22333321056671798307866787776887588244999999999---87-----289989999999 Q gi|254780215|r 176 FTGMITFPKY-DALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALA---KE-----KDVSYEDLMEET 246 (262) Q Consensus 176 ~~g~i~~~~~-~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA---~i-----~~~~~eei~~~~ 246 (262) .......... .............++.+.++....... .+......+.... .. .+++.++..+.. T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~gls~~eal~~a 394 (476) T 2uz9_A 322 HCPNSNLSLSSGFLNVLEVLKHEVKIGLGTDVAGGYSY-------SMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLA 394 (476) T ss_dssp ECHHHHHHTTCCCCCHHHHHHTTCEEEECCCTTTSCCC-------CHHHHHHHHHHHHHHHHHTTSSSSCCCHHHHHHHH T ss_pred CCCCCCHHCCCCCCCCHHHHHHCCEEEEECCCCCCCCC-------CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH T ss_conf 46541000134655402333211036772255556565-------45799999999988876314777799999999999 Q ss_pred HHHHHHHHHH Q ss_conf 9999998425 Q gi|254780215|r 247 TKNALKLFSK 256 (262) Q Consensus 247 ~~N~~~~f~~ 256 (262) +.|.-+++|. T Consensus 395 T~n~A~~lGl 404 (476) T 2uz9_A 395 TLGGSQALGL 404 (476) T ss_dssp THHHHHHTTC T ss_pred HHHHHHHHCC T ss_conf 9999998299 No 96 >3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A* Probab=48.16 E-value=14 Score=16.57 Aligned_cols=114 Identities=16% Similarity=0.216 Sum_probs=52.4 Q ss_pred EECCCCCHHH-HCCHHHHHHHHHHCCCCEEEEECCCHHH--------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH Q ss_conf 6138887565-2268999999998699899991679877--------899999998557233211244544334467889 Q gi|254780215|r 5 THCHLLLPDF-DEDRHDVIMRAHQANVLKMIAIAIKVKD--------FVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVL 75 (262) Q Consensus 5 ~H~HL~~~~~-~~d~~~~i~~a~~~gv~~~i~~~~~~~~--------~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~ 75 (262) +=.||+.... ...+...+..+...||..+++++-|+.. .....++.++.+. ....++.+|..-.+..+.. T Consensus 85 ~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~~~~~~~a~dLv~li~~~~~-~~igva~yPe~hp~~~~~~ 163 (304) T 3fst_A 85 AAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVAD-FDISVAAYPEVHPEAKSAQ 163 (304) T ss_dssp EEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHCC-CEEEEEECTTCCTTCSCHH T ss_pred CCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC-CCCCEECCCCCCCCCCHHH T ss_conf 534444789899999999999998397707661688888889876008999999986167-8873511787786521577 Q ss_pred HHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCCEE Q ss_conf 988531001333210044677553322111024678999987664204--42033 Q gi|254780215|r 76 VDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITG--IPLVI 128 (262) Q Consensus 76 ~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~--~pv~i 128 (262) ..+..+.. ++ +-|-||.-+..-.+ -+.|.+.++.+.+.+ .|++. T Consensus 164 -~d~~~lk~--Kv----~aGA~fiiTQ~~FD--~~~~~~~~~~~~~~Gi~~PIi~ 209 (304) T 3fst_A 164 -ADLLNLKR--KV----DAGANRAITQFFFD--VESYLRFRDRCVSAGIDVEIIP 209 (304) T ss_dssp -HHHHHHHH--HH----HHTCCEEEECCCSC--HHHHHHHHHHHHHTTCCSCEEC T ss_pred -HHHHHHHH--HH----HCCCCEEEEHHEEC--HHHHHHHHHHHHHCCCCCCCCC T ss_conf -77999999--99----72766074101004--9999999999997699711115 No 97 >2dqw_A Dihydropteroate synthase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.65A {Thermus thermophilus HB8} PDB: 2dza_A* 2dzb_A* Probab=47.97 E-value=14 Score=16.55 Aligned_cols=12 Identities=33% Similarity=0.252 Sum_probs=4.6 Q ss_pred HHHHHHHHCCCH Q ss_conf 999998728998 Q gi|254780215|r 228 AKALAKEKDVSY 239 (262) Q Consensus 228 ~~~iA~i~~~~~ 239 (262) +..+|-..|.++ T Consensus 255 ~~~~a~~~Ga~i 266 (294) T 2dqw_A 255 AHLFAVMKGVRL 266 (294) T ss_dssp HHHHHHHTTCCE T ss_pred HHHHHHHCCCCE T ss_conf 999999879989 No 98 >2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis} Probab=47.38 E-value=14 Score=16.49 Aligned_cols=19 Identities=11% Similarity=0.127 Sum_probs=7.3 Q ss_pred HHHHHHHHCC---CCCCEEEEE Q ss_conf 2233332105---667179830 Q gi|254780215|r 186 DALRAIARGI---PMDRVLVET 204 (262) Q Consensus 186 ~~~~e~v~~i---PldriLlET 204 (262) +++.++++.+ ...-|+.|. T Consensus 226 ~~l~~l~~~ik~~~v~~if~e~ 247 (312) T 2o1e_A 226 ASLAKLKTYAKEHNVKVIYFEE 247 (312) T ss_dssp HHHHHHHHHTTSSCCCEEECSS T ss_pred HHHHHHHHHHHHCCCCEEEEEC T ss_conf 6799999999983997899828 No 99 >3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str} Probab=45.77 E-value=15 Score=16.33 Aligned_cols=37 Identities=16% Similarity=0.258 Sum_probs=27.5 Q ss_pred CEEEEECCCCCHHH--HCCHHHHHHHHHHCCCCEEEEEC Q ss_conf 91686138887565--22689999999986998999916 Q gi|254780215|r 1 MLIDTHCHLLLPDF--DEDRHDVIMRAHQANVLKMIAIA 37 (262) Q Consensus 1 M~iD~H~HL~~~~~--~~d~~~~i~~a~~~gv~~~i~~~ 37 (262) |=+|-|+|-..... ....++++++|.+.|+..+.++- T Consensus 1 ~k~DlH~HT~~Sdg~~~~s~eelv~~A~~~Gl~~iaITD 39 (283) T 3dcp_A 1 MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVE 39 (283) T ss_dssp CCEEEEECCTTCTTSCCCCHHHHHHHHHHTTCCEEEEEE T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC T ss_conf 996253675985889838799999999987999999848 No 100 >2bvy_A MAN26A, beta-1,4-mannanase; hydrolase, glycoside hydrolase, family 26, CLAN GH-A; 2.25A {Cellulomonas fimi} SCOP: b.1.18.2 c.1.8.3 PDB: 2bvt_A 2x2y_A Probab=45.63 E-value=15 Score=16.32 Aligned_cols=104 Identities=10% Similarity=0.016 Sum_probs=56.3 Q ss_pred CCCCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCEEECHHH--------------HHHHHHHHHHHHHCCCCCCCCE Q ss_conf 46775533221---110246789999876642044203300023--------------3357999853100036753311 Q gi|254780215|r 93 ETGLDRYHNAH---TIEEQKVVFLRHIEASRITGIPLVIHSRSA--------------DDDMAAILQEEMKKGPFPFVIH 155 (262) Q Consensus 93 EiGLD~~~~~~---~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a--------------~~~~l~iL~~~~~~~~~~~i~H 155 (262) =+|+|.|.... ..+.+...+....++|.+.+||+.|-.-+. ..+++..++.+........++= T Consensus 242 ivG~D~Y~~~~~~~~~~~~~~~l~~l~~~A~~~gK~~altE~G~~~~~~~~~~~~~~W~~~ll~~i~~~~v~~~~aY~l~ 321 (475) T 2bvy_A 242 VLGLDTYDSTGSDAFLAGLVADLRMIAEIADEKGKVSAFTEFGVSGGVGTNGSSPAQWFTKVLAAIKADPVASRNAYMET 321 (475) T ss_dssp EECCEEEESSCCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCCTTHHHHHHHHHHHSTTTTCCSEEEE T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEEE T ss_conf 99985568988620578999999999998744798289954246687333678765149999999874840022125899 Q ss_pred ECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC Q ss_conf 2146402344321035202023322113332233332105667179830786678 Q gi|254780215|r 156 CFSSSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIV 210 (262) Q Consensus 156 ~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~ 210 (262) |.+-. .-.+|..+.|.. .+.+.++....+..|.+.|-|-+. T Consensus 322 W~N~~--------~~~~y~P~~g~~------~~~dF~~fy~~~~~lF~~~l~~~y 362 (475) T 2bvy_A 322 WANFD--------AGQHFVPVPGDA------LLEDFQAYAADPFTLFASEVTGAF 362 (475) T ss_dssp CCCCS--------SSSCSSCCTTCT------THHHHHHHHHSTTEEBGGGCCSTT T ss_pred EECCC--------CCCEEECCCCCC------CHHHHHHHHCCCCHHHHHHCHHHH T ss_conf 82689--------886633049965------589999987696232231153677 No 101 >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* Probab=45.25 E-value=13 Score=16.59 Aligned_cols=31 Identities=10% Similarity=-0.004 Sum_probs=16.6 Q ss_pred HHHHHHHHHHHHHHCCCCCEEECHHHHHHHH Q ss_conf 4678999987664204420330002333579 Q gi|254780215|r 108 QKVVFLRHIEASRITGIPLVIHSRSADDDMA 138 (262) Q Consensus 108 Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l 138 (262) +..-+...+.-+.+.+.+|+|||+.+-+.+= T Consensus 118 ~~~~~~~~i~~~l~~~~~V~VHC~aG~GRtG 148 (212) T 1fpz_A 118 SCCEIMEELTTCLKNYRKTLIHSYGGLGRSC 148 (212) T ss_dssp HHHHHHHHHHHHHHTTCCEEEECSSSSSHHH T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCHH T ss_conf 9999999999999859988997399998479 No 102 >2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimidine amidohydrolase, nucleotide metabolism, DHP, zinc, DPYS; 2.80A {Homo sapiens} Probab=45.03 E-value=15 Score=16.26 Aligned_cols=32 Identities=16% Similarity=0.126 Sum_probs=24.5 Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99999999872899899999999999998425 Q gi|254780215|r 225 VNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 225 ~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) .........-.+++.+++.+..+.|.-+.||. T Consensus 379 ~~~~~~~~~~~~ls~~eal~~~T~n~A~~lgl 410 (541) T 2vr2_A 379 SVIWEKGVHSGKMDENRFVAVTSTNAAKIFNL 410 (541) T ss_dssp HHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTC T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC T ss_conf 99999888715999999999974719998298 No 103 >2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} Probab=44.89 E-value=15 Score=16.25 Aligned_cols=27 Identities=11% Similarity=0.287 Sum_probs=13.8 Q ss_pred CCCEEEEECCCCC-CCCCCCCCCCCHHH Q ss_conf 6717983078667-87776887588244 Q gi|254780215|r 197 MDRVLVETDSPYI-VPVSCQGKRNEPAY 223 (262) Q Consensus 197 ldriLlETDsP~l-~p~~~r~~~n~P~~ 223 (262) .+||.+-|+++-+ .|.....+..-|.. T Consensus 310 ~~~l~lspscsLlhvP~~~~~e~~l~~~ 337 (755) T 2nq5_A 310 SAALTIQPSCSLLHVPVTTKNETDLDPV 337 (755) T ss_dssp SSEEEEEESSCGGGSCSCSTTCTTSCHH T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCHH T ss_conf 5767976787644577637677778978 No 104 >2i5i_A UPF0249 protein EF_3048; putative cellobiose-phosphate cleavage protein, structural G joint center for structural genomics, JCSG; HET: MSE; 1.70A {Enterococcus faecalis V583} SCOP: c.6.2.8 Probab=44.84 E-value=15 Score=16.24 Aligned_cols=53 Identities=15% Similarity=0.244 Sum_probs=38.2 Q ss_pred HHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCC Q ss_conf 52268999999998699899991679877899999998-557233211244544334 Q gi|254780215|r 14 FDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQ-DYPSSIFCSVGTHPCHAH 69 (262) Q Consensus 14 ~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~-~~p~~i~~a~GiHP~~~~ 69 (262) +......-+.++.+.|+..-..+-++-..|..+.++.+ ..|. ..+|+|=+... T Consensus 16 ~~~~vn~gi~~~~~~G~lts~s~Mvn~p~~~~a~~~~k~~~~~---~~vGlHl~Lt~ 69 (263) T 2i5i_A 16 YTPAVTQGIIEAHKRGVVTSTTALPTSPYFLEAMESARISAPT---LAIGVHLTLTL 69 (263) T ss_dssp SSHHHHHHHHHHHHSSSCCEEEECTTSTTHHHHHHHHHHHCTT---CEEEEEECSCC T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCC---CCEEEEEEECC T ss_conf 9877899999999879866878635880699999999865898---76456677416 No 105 >1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A* Probab=44.28 E-value=15 Score=16.18 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=24.9 Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 999999999872899899999999999998425 Q gi|254780215|r 224 VVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 224 i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ..........-.+++.++..+.++.|.-++||. T Consensus 344 ~~~~~~~~~~~~~l~~~~ai~~~T~npA~~lgl 376 (458) T 1gkp_A 344 VNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGL 376 (458) T ss_dssp HHHHHHHHTTSSSCCHHHHHHHHTHHHHHHTTC T ss_pred CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC T ss_conf 135555554416989999999996999998399 No 106 >2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, degradation of homoprotocatechuate, class II aldolase; 1.39A {Escherichia coli} PDB: 2vwt_A Probab=42.75 E-value=16 Score=16.03 Aligned_cols=140 Identities=14% Similarity=0.215 Sum_probs=63.7 Q ss_pred HHHHHHHHHCCCCEEEEECCC-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----CHHHH----HHHH--------- Q ss_conf 999999998699899991679-87789999999855723321124454433446----78899----8853--------- Q gi|254780215|r 19 HDVIMRAHQANVLKMIAIAIK-VKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEE----NEVLV----DELV--------- 80 (262) Q Consensus 19 ~~~i~~a~~~gv~~~i~~~~~-~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~----~~~~~----~~l~--------- 80 (262) ...+.++.+.|...++.+-++ .++-+.+.+.++ ||.. ..=|+.|...... .++.. ++.. T Consensus 80 ~~~i~r~LD~Ga~GIivP~v~s~eea~~~v~~~r-ypP~--G~Rg~~~~~~~~~~~~~~~~y~~~~n~~~~vi~qIEt~~ 156 (267) T 2vws_A 80 KPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATR-YPPY--GERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKT 156 (267) T ss_dssp HHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTS-CTTT--SCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHH T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHC-CCCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCHH T ss_conf 7999999838998899899499999999999860-6999--999887653321246763689999986422202026699 Q ss_pred HHCCCCCCCEECCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCEEEC---HHHHHHHHHHHHHHHHCCCCCCCCEE Q ss_conf 10013332100446775533-221110246789999876642044203300---02333579998531000367533112 Q gi|254780215|r 81 CLASHPRVVAIGETGLDRYH-NAHTIEEQKVVFLRHIEASRITGIPLVIHS---RSADDDMAAILQEEMKKGPFPFVIHC 156 (262) Q Consensus 81 ~l~~~~~~~aIGEiGLD~~~-~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~---r~a~~~~l~iL~~~~~~~~~~~i~H~ 156 (262) -+.+-+++++| =|+|... ... +|+..++.|-.... ..+.+++++..+++ + .+.-+| T Consensus 157 av~nleeI~av--~GvD~i~iGp~-------------DLS~slG~pg~~~~p~v~~ai~~v~~~~~~~---g-k~~G~~- 216 (267) T 2vws_A 157 ALDNLDEILDV--EGIDGVFIGPA-------------DLSASLGYPDNAGHPEVQRIIETSIRRIRAA---G-KAAGFL- 216 (267) T ss_dssp HHHTHHHHHTS--TTCCEEEECHH-------------HHHHHTTCSSSCCTHHHHHHHHHHHHHHHHT---T-CEEEEE- T ss_pred HHHHHHHHHCC--CCCCEEEECCH-------------HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC---C-CCEEEC- T ss_conf 99979987456--89853567807-------------7887339998899836899999999999986---9-976663- Q ss_pred CCCCHHHHHHHHCCCC-EEECCCCCCH Q ss_conf 1464023443210352-0202332211 Q gi|254780215|r 157 FSSSQKLADICLELGG-YISFTGMITF 182 (262) Q Consensus 157 FsG~~~~~~~~l~~g~-y~S~~g~i~~ 182 (262) .++.+.+++++++|+ +|+++..+.+ T Consensus 217 -~~~~~~~~~~~~~G~~~~~~g~D~~~ 242 (267) T 2vws_A 217 -AVAPDMAQQCLAWGANFVAVGVDTML 242 (267) T ss_dssp -CSSHHHHHHHHHTTCCEEEEEEHHHH T ss_pred -CCCHHHHHHHHHCCCCEEEEHHHHHH T ss_conf -79999999999749999996289999 No 107 >3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis} Probab=42.71 E-value=16 Score=16.03 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=25.8 Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 44999999999872899899999999999998425 Q gi|254780215|r 222 AYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 222 ~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ...........+-.+++.+++.+..+.|.-++||. T Consensus 329 ~~~~~~~~~~~~~~~ls~~~al~~aT~n~Ak~lgl 363 (428) T 3mpg_A 329 TAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGL 363 (428) T ss_dssp THHHHHHHHTTTTTSSCHHHHHHTTTHHHHHHHTC T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 45678887765528999999999999999999599 No 108 >3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A Probab=40.68 E-value=17 Score=15.82 Aligned_cols=145 Identities=11% Similarity=0.007 Sum_probs=64.0 Q ss_pred HHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH-----------HHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCC Q ss_conf 789999876642044203300023335799985-----------310003675331121464023443210352020233 Q gi|254780215|r 110 VVFLRHIEASRITGIPLVIHSRSADDDMAAILQ-----------EEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTG 178 (262) Q Consensus 110 ~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~-----------~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g 178 (262) +.......++.+.+.++..|.-....+...... ............|+-.-.........+......... T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (479) T 3h4u_A 240 DLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCP 319 (479) T ss_dssp HHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECH T ss_pred HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCEECCC T ss_conf 99999887776459715653013347899999871886033210012000222101211125117888863165210154 Q ss_pred CCCHHHH-HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 2211333-22333321056671798307866787776887588244999999999872899899999999999998425 Q gi|254780215|r 179 MITFPKY-DALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 179 ~i~~~~~-~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ....... ................+.||++...+.+.. ...+............-.+++.++..+..+.|.-++||. T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~npA~~lgl 396 (479) T 3h4u_A 320 CSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQM--VAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNR 396 (479) T ss_dssp HHHHHTTCCCCCHHHHHHTTCCEEECCCCTTSSCCCCH--HHHHHHHHHHHHHHHCTTSCCHHHHHHHTTHHHHHHHTC T ss_pred CCHHHCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 30011035654133332035515640355667863104--788999999887531224889999999998999998099 No 109 >2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} Probab=39.12 E-value=7.8 Score=18.17 Aligned_cols=21 Identities=5% Similarity=0.064 Sum_probs=17.6 Q ss_pred CCCHHHHHHHHHHHHHHHHHH Q ss_conf 899899999999999998425 Q gi|254780215|r 236 DVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 236 ~~~~eei~~~~~~N~~~~f~~ 256 (262) +++.+++.+..+.|.-++||. T Consensus 333 ~~~~~~al~~~T~~~A~~lgl 353 (403) T 2qt3_A 333 NRDLGLIWKMITSEGARVLGI 353 (403) T ss_dssp HHHHHHHHHHTTHHHHHHHTC T ss_pred CCCHHHHHHHHHHHHHHHHCC T ss_conf 999999999999999998299 No 110 >2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} Probab=39.10 E-value=18 Score=15.66 Aligned_cols=32 Identities=9% Similarity=0.264 Sum_probs=18.7 Q ss_pred HHHHHHHHHHCCCCCEEECH---HHHHHHHHHHHH Q ss_conf 99998766420442033000---233357999853 Q gi|254780215|r 112 FLRHIEASRITGIPLVIHSR---SADDDMAAILQE 143 (262) Q Consensus 112 F~~ql~lA~e~~~pv~iH~r---~a~~~~l~iL~~ 143 (262) ++.-+++|.+++.|+++.+- +..+++.+.+.+ T Consensus 162 ~~~m~~~a~~~~~pvi~~~~~d~~~~k~l~~~l~~ 196 (310) T 2h9a_B 162 YKPIVATCMVHGHSVVASAPLDINLSKQLNIMIME 196 (310) T ss_dssp HHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHT T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH T ss_conf 48999999982998999878538999999999998 No 111 >3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase, target 9265M, PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A* Probab=38.98 E-value=19 Score=15.65 Aligned_cols=24 Identities=17% Similarity=0.112 Sum_probs=16.1 Q ss_pred HHHHHHHHHHHHHCCCCCEEECHH Q ss_conf 678999987664204420330002 Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRS 132 (262) Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~ 132 (262) ..-+.+..++|.++++|++.|+-. T Consensus 300 it~~~kia~lA~~~gi~v~~H~~~ 323 (404) T 3ekg_A 300 VTELLKISALADAHNALVVPHGSS 323 (404) T ss_dssp HHHHHHHHHHHHHTTCEECCCCCT T ss_pred HHHHHHHHHHHHHCCCEEEECCHH T ss_conf 999999999999869969855529 No 112 >2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A Probab=38.83 E-value=19 Score=15.64 Aligned_cols=102 Identities=9% Similarity=0.097 Sum_probs=54.5 Q ss_pred HHHHHHHHHHCCCCEEEEECC-------CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE Q ss_conf 899999999869989999167-------9877899999998557233211244544334467889988531001333210 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAI-------KVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVA 90 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~-------~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~a 90 (262) +...++...+.|+..++..|+ +.++..+..+.+.+....+.+.+|- ....+..+ +.+.+.+-.+-+ T Consensus 21 ~~~~i~~l~~~Gv~Gl~~~GstGE~~~Ls~~Er~~l~~~~~~~~~~~i~gv~~------~st~~~i~-~a~~a~~~G~d~ 93 (286) T 2r91_A 21 FANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVAS------LNADEAIA-LAKYAESRGAEA 93 (286) T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECCC------SSHHHHHH-HHHHHHHTTCSE T ss_pred HHHHHHHHHHCCCCEEEECEECCCHHHCCHHHHHHHHHHHHHHCCCEEECCCC------CCHHHHHH-HHHHHHHCCCCE T ss_conf 99999999977999999791265610289999999999999742451211124------32589999-999999869998 Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEC Q ss_conf 0446775533221110246789999876642044203300 Q gi|254780215|r 91 IGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHS 130 (262) Q Consensus 91 IGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~ 130 (262) + =+-..+++...+ |..++...-++|...++|++++- T Consensus 94 i-~~~pp~~~~~~~---~~~i~~~~~~ia~~~~~pi~lYn 129 (286) T 2r91_A 94 V-ASLPPYYFPRLS---ERQIAKYFRDLCSAVSIPVFLYN 129 (286) T ss_dssp E-EECCSCSSTTCC---HHHHHHHHHHHHHHCSSCEEEEE T ss_pred E-EECCCCCCCCCC---HHHHHHHHHHHHHCCCCEEEEEC T ss_conf 9-866985234688---89999999987624474377634 No 113 >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 2i6o_A* 2dxp_A* 2i6p_A* Probab=38.10 E-value=18 Score=15.74 Aligned_cols=28 Identities=11% Similarity=0.009 Sum_probs=18.1 Q ss_pred HHHHHHHHHHCCCCCEEECHHHHHHHHH Q ss_conf 9999876642044203300023335799 Q gi|254780215|r 112 FLRHIEASRITGIPLVIHSRSADDDMAA 139 (262) Q Consensus 112 F~~ql~lA~e~~~pv~iH~r~a~~~~l~ 139 (262) +...++-+.+.+.||.|||..+-+.+-- T Consensus 78 ~~~~~~~~~~~~~~VlVHC~aG~gRtgt 105 (161) T 2i6j_A 78 FLTIMKWLLSEKEGNLVHCVGGIGRTGT 105 (161) T ss_dssp HHHHHHHHHHCCTTEEEECSSSSHHHHH T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCHHH T ss_conf 9999999997799889983899981799 No 114 >2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4 Probab=37.97 E-value=19 Score=15.55 Aligned_cols=121 Identities=7% Similarity=-0.091 Sum_probs=56.0 Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHH-------HHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCHHHHHHHHHHCCCCC Q ss_conf 6899999999869989999167987-------7899999998557233211244544334--467889988531001333 Q gi|254780215|r 17 DRHDVIMRAHQANVLKMIAIAIKVK-------DFVPLIKLCQDYPSSIFCSVGTHPCHAH--EENEVLVDELVCLASHPR 87 (262) Q Consensus 17 d~~~~i~~a~~~gv~~~i~~~~~~~-------~~~~~~~l~~~~p~~i~~a~GiHP~~~~--~~~~~~~~~l~~l~~~~~ 87 (262) .+++.++.+.+.|...+=....... +.....++.+++.-.+ .+++.+-.+.. .......+.++..+.-. T Consensus 37 ~lee~l~~aae~GfdgVEl~~~~~~~~~~~~~~~~~l~~~l~~~GL~i-~~i~~~~~~~~~~~~~~~~~~~~~~~i~~a- 114 (296) T 2g0w_A 37 SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKV-TEVEYITQWGTAEDRTAEQQKKEQTTFHMA- 114 (296) T ss_dssp CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEE-EEEECBCCCSSTTTCCHHHHHHHHHHHHHH- T ss_pred CHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEE-EEEECCCCCCCCHHHHHHHHHHHHHHHHHH- T ss_conf 999999999996979999745323000446899999999999719979-998655455787078999999999999999- Q ss_pred CCEECCCCCCCC----CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEC---HHHHHHHHHHHHH Q ss_conf 210044677553----3221110246789999876642044203300---0233357999853 Q gi|254780215|r 88 VVAIGETGLDRY----HNAHTIEEQKVVFLRHIEASRITGIPLVIHS---RSADDDMAAILQE 143 (262) Q Consensus 88 ~~aIGEiGLD~~----~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~---r~a~~~~l~iL~~ 143 (262) -++|-.+. ....+.+...+.|.+..+.|.+++..+-.|. .+..+++++++.. T Consensus 115 ----~~lg~~~v~~~~~~~~~~~~~~~~l~~l~~~A~~~gi~l~~~~~~~v~t~~~~~~l~~~ 173 (296) T 2g0w_A 115 ----RLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAEA 173 (296) T ss_dssp ----HHHTCCEEEECCCSCCCHHHHHHHHHHHHHHHTTSEEEEECCTTSSSCSHHHHHHHHHH T ss_pred ----HHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHH T ss_conf ----97199989647998117899999999999983468569997057778999999999985 No 115 >1vp8_A Hypothetical protein AF0103; NP_068944.1, structural genomics, JCSG, joint center for structural genomics, PSI; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus dsm 4304} SCOP: c.49.1.2 Probab=36.25 E-value=20 Score=15.37 Aligned_cols=63 Identities=11% Similarity=0.127 Sum_probs=42.3 Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC----CCCCCHHHHHHHHH Q ss_conf 2689999999986998999916798778999999985572332112445443----34467889988531 Q gi|254780215|r 16 EDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCH----AHEENEVLVDELVC 81 (262) Q Consensus 16 ~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~----~~~~~~~~~~~l~~ 81 (262) .-++..++||.+.||..++..+++-+.-.+++++.+.. .+ .++.-|+=+ ..+.+++..+.|++ T Consensus 30 ~tl~~a~erA~e~gIk~iVVASssG~TA~k~~e~~kg~--~l-VvVth~~GF~~pg~~e~~~e~~~~L~~ 96 (201) T 1vp8_A 30 ETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGL--EV-VVVTYHTGFVREGENTMPPEVEEELRK 96 (201) T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTC--EE-EEEECCTTSSSTTCCSSCHHHHHHHHH T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCC--CE-EEEECCCCCCCCCCCCCCHHHHHHHHH T ss_conf 99999999999869977999708866999999974598--29-999563687899957489999999997 No 116 >2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus} Probab=36.16 E-value=21 Score=15.37 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=54.0 Q ss_pred HHHHHHHHHHCCCCEEEEECCC-------HHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC Q ss_conf 8999999998699899991679-------8778999999985-5723321124454433446788998853100133321 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAIK-------VKDFVPLIKLCQD-YPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVV 89 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~~-------~~~~~~~~~l~~~-~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~ 89 (262) +...++...+.|+..++..|++ .++..+..+.+.+ -++.+...+|+=. ...++..+ +.+.+.+-.+- T Consensus 23 l~~~i~~li~~Gv~Gi~~~G~tGE~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~~----~s~~~~i~-~a~~a~~~Gad 97 (294) T 2ehh_A 23 LGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGG----NATHEAVH-LTAHAKEVGAD 97 (294) T ss_dssp HHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC----SCHHHHHH-HHHHHHHTTCS T ss_pred HHHHHHHHHHCCCCEEEECEECCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECC----CCHHHHHH-HHHHHHHCCCC T ss_conf 99999999975999899785543343489999999999999973899878998178----45999999-99999976999 Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH Q ss_conf 004467755332211102467899998766420442033000 Q gi|254780215|r 90 AIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR 131 (262) Q Consensus 90 aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r 131 (262) || =+.-.||... .|.++++..=++|...++|++++.. T Consensus 98 ~i-~v~pP~~~~~----~~~~~~~~~~~i~~~~~~pi~lYn~ 134 (294) T 2ehh_A 98 GA-LVVVPYYNKP----TQRGLYEHFKTVAQEVDIPIIIYNI 134 (294) T ss_dssp EE-EEECCCSSCC----CHHHHHHHHHHHHHHCCSCEEEEEC T ss_pred EE-EECCCCCCCC----CHHHHHHHHHHHHHHCCCCEEEEEC T ss_conf 99-9889999998----9999999999999713997899956 No 117 >2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A Probab=35.76 E-value=21 Score=15.32 Aligned_cols=103 Identities=12% Similarity=0.090 Sum_probs=53.6 Q ss_pred HHHHHHHHHHCCCCEEEEECC-------CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE Q ss_conf 899999999869989999167-------9877899999998557233211244544334467889988531001333210 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAI-------KVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVA 90 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~-------~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~a 90 (262) +.+.++...+.|+..++..|+ +.++..+..+.+.+....+.+.+| ....++..+ +.+.+.+-.+.| T Consensus 22 l~~~i~~l~~~Gv~Gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~i~~v~------~~~t~~~~~-~~~~a~~~G~d~ 94 (288) T 2nuw_A 22 LKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQVG------SLNLNDVME-LVKFSNEMDILG 94 (288) T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEECC------CSCHHHHHH-HHHHHHTSCCSE T ss_pred HHHHHHHHHHCCCCEEEECEEHHHHHHCCHHHHHHHHHHHHHHCCCEEECCC------CCHHHHHHH-HHHHHHHHHHCC T ss_conf 9999999998599989978212547768999999999987664034331245------300899999-999887754021 Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH Q ss_conf 04467755332211102467899998766420442033000 Q gi|254780215|r 91 IGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR 131 (262) Q Consensus 91 IGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r 131 (262) +- +--.+|+... .+..+....-++|...++|+++... T Consensus 95 ~~-~~~P~y~~~~---~~~~i~~~~~~ia~~~~~pi~iYn~ 131 (288) T 2nuw_A 95 VS-SHSPYYFPRL---PEKFLAKYYEEIARISSHSLYIYNY 131 (288) T ss_dssp EE-ECCCCSSCSC---CHHHHHHHHHHHHHHCCSCEEEEEC T ss_pred CC-CCCCCCCCCH---HHHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 31-0477432311---2788999999985413798542057 No 118 >1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A* Probab=35.58 E-value=21 Score=15.30 Aligned_cols=177 Identities=10% Similarity=0.063 Sum_probs=93.0 Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC- Q ss_conf 9999999855723321124454433446788998853100133321004467755332211102467899998766420- Q gi|254780215|r 44 VPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRIT- 122 (262) Q Consensus 44 ~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~- 122 (262) .++.++++.+-+.+..+.=++|.. ..+...++++. -..++| .|. ..+...... +++++ T Consensus 17 ~e~~~~~~~~~d~v~~~~~~~~~~----~~e~~~e~~~~---y~~~~i---~l~----~~~p~~~~~-------~v~~~r 75 (212) T 1v77_A 17 KEAYELAKEWFDEVVVSIKFNEEV----DKEKLREARKE---YGKVAI---LLS----NPKPSLVRD-------TVQKFK 75 (212) T ss_dssp HHHHHHHHHHCSEEEEEEEESSCC----CHHHHHHHHHH---HSCEEE---EEE----SCCHHHHHH-------HHHHCS T ss_pred CHHHHHHHHCCCCEEEEEECCCCH----HHHHHHHHHHH---CCCEEE---EEE----CCCHHHHHH-------HHHHHC T ss_conf 047899974477637986338501----08999999874---272389---995----299899999-------998634 Q ss_pred CCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHH------HHHHHHCCCCEEECC--CCCC---HHHH------ Q ss_conf 4420330002333579998531000367533112146402------344321035202023--3221---1333------ Q gi|254780215|r 123 GIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSSQK------LADICLELGGYISFT--GMIT---FPKY------ 185 (262) Q Consensus 123 ~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~~~------~~~~~l~~g~y~S~~--g~i~---~~~~------ 185 (262) +--|.+|.- ...+.+.--+ . ..-++.|-+.+..+ +++.+.+.|..|-|+ +.+. ..|. T Consensus 76 ~~iv~V~gg--~~~~NR~A~e---~-~VDiL~~P~~~r~d~gi~hvlak~A~e~gValEIn~s~ll~~~~~~R~~~l~n~ 149 (212) T 1v77_A 76 SYLIYVESN--DLRVIRYSIE---K-GVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFM 149 (212) T ss_dssp SSEEEEECS--CHHHHHHHHH---T-TCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHH T ss_pred CCEEEEECC--CHHHHHHHHH---C-CCCEEECCCCCCCCCCCCHHHHHHHHHCCEEEEEECHHHHCCCCCCHHHHHHHH T ss_conf 719999789--7789899871---7-954895686546777857899999997891899976276447986478999999 Q ss_pred HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 2233332105667179830786678777688758824499999999987289989999999999999842568 Q gi|254780215|r 186 DALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSKIS 258 (262) Q Consensus 186 ~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~~~ 258 (262) .++..+++... -.+++-|||-.. ...| .| .-+..++...|++.++..+.+..|..++..|++ T Consensus 150 ~~ll~L~kky~-~piVvsSdAhs~--~dlr----sp----~d~~~L~~~~Gl~~~~a~~als~~P~~Il~rlK 211 (212) T 1v77_A 150 MKAWKLVEKYK-VRRFLTSSAQEK--WDVR----YP----RDLISLGVVIGMEIPQAKASISMYPEIILKRLK 211 (212) T ss_dssp HHHHHHHHHHT-CCEEEECCCSSG--GGCC----CH----HHHHHHHHHTTCCHHHHHHTTTHHHHHHHC--- T ss_pred HHHHHHHHHHC-CCEEEECCCCCH--HHCC----CH----HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC T ss_conf 99999999819-988997699982--0127----99----999999998598999999999988999998642 No 119 >1ad1_A DHPS, dihydropteroate synthetase; transferase, APO form, complex with OH-CH2-pterin-pyrophosphate; 2.20A {Staphylococcus aureus} SCOP: c.1.21.1 PDB: 1ad4_A* Probab=35.58 E-value=21 Score=15.30 Aligned_cols=17 Identities=12% Similarity=0.227 Sum_probs=12.2 Q ss_pred HHHHHHCCCCCE-EECHH Q ss_conf 876642044203-30002 Q gi|254780215|r 116 IEASRITGIPLV-IHSRS 132 (262) Q Consensus 116 l~lA~e~~~pv~-iH~r~ 132 (262) ++++.+++.|++ .|.++ T Consensus 114 ~~~va~~~~~~ilmH~~~ 131 (266) T 1ad1_A 114 FQVVAKYDAEIVLMHNGN 131 (266) T ss_dssp HHHHHHTTCEEEEECCCC T ss_pred HHHHHHCCCCEEEEECCC T ss_conf 999971499868720786 No 120 >3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* Probab=35.13 E-value=21 Score=15.26 Aligned_cols=47 Identities=17% Similarity=0.101 Sum_probs=27.7 Q ss_pred CCCCCEECCCC-HHHHHHHHCCCC-EEECCCCCCHHHHHHHHHHHHCCC Q ss_conf 75331121464-023443210352-020233221133322333321056 Q gi|254780215|r 150 FPFVIHCFSSS-QKLADICLELGG-YISFTGMITFPKYDALRAIARGIP 196 (262) Q Consensus 150 ~~~i~H~FsG~-~~~~~~~l~~g~-y~S~~g~i~~~~~~~~~e~v~~iP 196 (262) .+.++|.-||. .+++++++++|. .+-|+..+...=...+|+.+..-| T Consensus 247 vpLVlHGgSGip~e~i~~ai~~Gi~KiNi~T~l~~a~~~~vr~~~~~~~ 295 (349) T 3elf_A 247 FDFVFHGGSGSLKSEIEEALRYGVVKMNVDTDTQYAFTRPIAGHMFTNY 295 (349) T ss_dssp CCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHTH T ss_pred CCEEECCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCC T ss_conf 6525138999989999999984981896276899999999999998584 No 121 >1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1 Probab=34.85 E-value=21 Score=15.23 Aligned_cols=43 Identities=23% Similarity=0.322 Sum_probs=32.0 Q ss_pred HHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 7899998766420442033000233357999853100036753 Q gi|254780215|r 110 VVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPF 152 (262) Q Consensus 110 ~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~ 152 (262) +-+..-|+.+.+-++|++|.+.+-.++++..|-....++..++ T Consensus 40 ~~ilp~Le~~~~~~rPLlIIAedi~~eaL~~Lv~N~~~g~l~v 82 (145) T 1srv_A 40 RELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSV 82 (145) T ss_dssp HHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSCCE T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEE T ss_conf 9999999999971996799957667899999999986088179 No 122 >2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae} Probab=34.53 E-value=11 Score=17.14 Aligned_cols=50 Identities=18% Similarity=0.158 Sum_probs=27.3 Q ss_pred HHHCCCCCEEECHH-----HHHHHHHHHHHHHHCCCC-CCCCEECCCCHHHHHHHH Q ss_conf 64204420330002-----333579998531000367-533112146402344321 Q gi|254780215|r 119 SRITGIPLVIHSRS-----ADDDMAAILQEEMKKGPF-PFVIHCFSSSQKLADICL 168 (262) Q Consensus 119 A~e~~~pv~iH~r~-----a~~~~l~iL~~~~~~~~~-~~i~H~FsG~~~~~~~~l 168 (262) +.-+|-||++|.++ +.++++..|..+...... ..+--..+|+..++++.- T Consensus 13 ~~~Ln~PVV~H~~g~PqhvS~de~LqFL~~FI~eKE~~~~~Dt~lssaLaQLKRvq 68 (87) T 2rf4_B 13 ATTLNTPVVIHATQLPQHVSTDEVLQFLESFIDEKENIIDIDTNLSSSISQLKRIQ 68 (87) T ss_dssp ---CCCCCEEEESSCCEECCHHHHHHHHHHHHHHHHSSSCCCTTHHHHHHHHHHHH T ss_pred CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH T ss_conf 65478886885278975258999999999999876654200003457899999998 No 123 >1gnl_A HCP, hybrid cluster protein; anaerobic desulfovibrio desulfuricans, iron anomalous; HET: FSO; 1.25A {Desulfovibrio desulfuricans} SCOP: e.26.1.1 PDB: 1gn9_A* 1oa0_A* 1upx_A* Probab=34.30 E-value=22 Score=15.17 Aligned_cols=191 Identities=15% Similarity=0.148 Sum_probs=90.4 Q ss_pred CEEEEECCCHHHHHHHHHHHHHCC-----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHC---------------- Q ss_conf 899991679877899999998557-----------23321124454433446788998853100---------------- Q gi|254780215|r 31 LKMIAIAIKVKDFVPLIKLCQDYP-----------SSIFCSVGTHPCHAHEENEVLVDELVCLA---------------- 83 (262) Q Consensus 31 ~~~i~~~~~~~~~~~~~~l~~~~p-----------~~i~~a~GiHP~~~~~~~~~~~~~l~~l~---------------- 83 (262) ..+++.|.++.+.+..++.++.-. -.-||++|=.|+.+..+...+.++..... T Consensus 233 vnIlV~GHd~~~~e~il~~~e~~gi~vyt~~E~l~~~g~p~~~k~~~l~g~~G~~~~~e~~~~tg~~~aiv~d~nCi~p~ 312 (544) T 1gnl_A 233 PGILISGHDLRDLEMLLKQTEGTGVDVYTHSEMLPAHYYPAFKKYAHFKGNYGNAWWKQKEEFESFNGPVLLTTNCLVPP 312 (544) T ss_dssp CEEEEESSCHHHHHHHHHHHTTTTCEEEECGGGGGGGGSGGGGGCTTEEEECSSSGGGHHHHHHHHCSCEEESSSCCCCC T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCC T ss_conf 76999799748799999976148826664215311003564033531011467788878998717973078773146677 Q ss_pred ---CCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHH-----HHHHHHHHHHHHHHCCCCCCCCE Q ss_conf ---1333210044677553322111024678999987664204420330002-----33357999853100036753311 Q gi|254780215|r 84 ---SHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRS-----ADDDMAAILQEEMKKGPFPFVIH 155 (262) Q Consensus 84 ---~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~-----a~~~~l~iL~~~~~~~~~~~i~H 155 (262) -..++...|.+|++--..-...+....-|.+.++.|.+...++-....+ +++-++.. T Consensus 313 ~~~y~~ri~tt~~v~~pg~~hi~~~~~~~~d~~~vI~~A~~~~~~~~~~~~~~~~GFs~eail~~--------------- 377 (544) T 1gnl_A 313 KDSYKDRVYTTGIVGFTGCKHIPGEIGEHKDFSAIIAHAKTCPAPTEIESGEIIGGFAHNQVLAL--------------- 377 (544) T ss_dssp CHHHHTTEEEETTCBCTTSEEECCSSSCCCCCHHHHHHHHTSCCCCCSCCSEEEECCCHHHHHHT--------------- T ss_pred HHHHCCCCEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHH--------------- T ss_conf 57747751452776789986458885667576999999986799978788769986558999986--------------- Q ss_pred ECCCCHHHHHHHHCCC---CEEECCCCCCHHH-HHHHHHHHHCCCCCCEEEEECCCC-------------CCCCCCCCCC Q ss_conf 2146402344321035---2020233221133-322333321056671798307866-------------7877768875 Q gi|254780215|r 156 CFSSSQKLADICLELG---GYISFTGMITFPK-YDALRAIARGIPMDRVLVETDSPY-------------IVPVSCQGKR 218 (262) Q Consensus 156 ~FsG~~~~~~~~l~~g---~y~S~~g~i~~~~-~~~~~e~v~~iPldriLlETDsP~-------------l~p~~~r~~~ 218 (262) ...+-..+..| -.|.+.|.=..++ ..-..++.+.+|.|-|.|-|=.=- ++|.--=|+= T Consensus 378 -----~~~lidaI~~G~Irgv~~ivGC~~~~~~~~~~t~~~eli~~d~lVlt~GC~~~~~~~~gl~~~~GiPpvL~~G~C 452 (544) T 1gnl_A 378 -----ADKVIDAVKSGAIKKFVVMAGCDGRAKSRSYYTDFAEGLPKDTVILTAGCAKYRYNKLNLGDIGGIPRVLDAGQC 452 (544) T ss_dssp -----HHHHHHHHHTTSCCEEEECCBCCCSCGGGHHHHHHHHHSCTTEEEEECSGGGGGTTTSCCCEETTEESEEECCSG T ss_pred -----HHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCEEECCCC T ss_conf -----799999997198663899970888997753999999875578699835276665002589875799864005056 Q ss_pred CCHHHHHHHHHHHHHHHCC-CHHH Q ss_conf 8824499999999987289-9899 Q gi|254780215|r 219 NEPAYVVNTAKALAKEKDV-SYED 241 (262) Q Consensus 219 n~P~~i~~~~~~iA~i~~~-~~ee 241 (262) |.-+.+..++..+|+..|+ ++.+ T Consensus 453 ~D~~r~~~~a~~LA~~lg~~di~d 476 (544) T 1gnl_A 453 NDSYSLAVIALKLKEVFGLEDVND 476 (544) T ss_dssp GGHHHHHHHHHHHHHHTTCSCGGG T ss_pred CCHHHHHHHHHHHHHHCCCCCCCC T ss_conf 337889999999999739997566 No 124 >2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transferase; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A Probab=33.54 E-value=23 Score=15.09 Aligned_cols=48 Identities=13% Similarity=0.176 Sum_probs=26.0 Q ss_pred HHHHHHHCCCCCEEECHHH-HHHHHHHHHHHHHCCCCCCCCEECCCCHH Q ss_conf 9876642044203300023-33579998531000367533112146402 Q gi|254780215|r 115 HIEASRITGIPLVIHSRSA-DDDMAAILQEEMKKGPFPFVIHCFSSSQK 162 (262) Q Consensus 115 ql~lA~e~~~pv~iH~r~a-~~~~l~iL~~~~~~~~~~~i~H~FsG~~~ 162 (262) .|+-+.+.++|+++=+=.+ ..|+-+.++........-+++||++.=+. T Consensus 140 Li~~i~~~~kpiiiStG~~~~~eI~~~v~~~~~~~~~~~llhC~s~YPt 188 (349) T 2wqp_A 140 LIKLVASFGKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPT 188 (349) T ss_dssp HHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSC T ss_pred HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCC T ss_conf 9999997399756743543055566789888763246313253489995 No 125 >1e9y_B Urease beta subunit; hydrolase, dodecamer, acetohydroxamic acid; HET: KCX; 3.0A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* Probab=33.45 E-value=23 Score=15.08 Aligned_cols=21 Identities=10% Similarity=0.047 Sum_probs=15.5 Q ss_pred CCCHHHHHHHHHHHHHHHHHH Q ss_conf 899899999999999998425 Q gi|254780215|r 236 DVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 236 ~~~~eei~~~~~~N~~~~f~~ 256 (262) +++.++..+..+-|.-+.+|- T Consensus 399 ~ls~~~aI~~aTiNpA~alGL 419 (569) T 1e9y_B 399 NFRIKRYLSKYTINPAIAHGI 419 (569) T ss_dssp HHHHHHHHGGGTHHHHHHTTC T ss_pred CCCHHHHHHHHHHHHHHHCCC T ss_conf 999999999986999998199 No 126 >3hh8_A Metal ABC transporter substrate-binding lipoprotein; metal binding, cell membrane, copper, copper transport, ION transport; 1.87A {Streptococcus pyogenes serotype M1} PDB: 1psz_A Probab=33.45 E-value=23 Score=15.08 Aligned_cols=20 Identities=20% Similarity=0.218 Sum_probs=12.1 Q ss_pred HHHHHHHHCCCCCCEEEEEC Q ss_conf 22333321056671798307 Q gi|254780215|r 186 DALRAIARGIPMDRVLVETD 205 (262) Q Consensus 186 ~~~~e~v~~iPldriLlETD 205 (262) .++.+.++.-...-|+.|.. T Consensus 222 ~~l~~~ik~~~v~~if~e~~ 241 (294) T 3hh8_A 222 SSLIEKLKVIKPSALFVESS 241 (294) T ss_dssp HHHHHHHHHSCCSCEEEETT T ss_pred HHHHHHHHHCCCCEEEECCC T ss_conf 99999998739978997698 No 127 >1xxx_A DHDPS, dihydrodipicolinate synthase; DAPA, RV2753C, lysine biosynthesis, structural genomics, PSI protein structure initiative; 2.28A {Mycobacterium tuberculosis} SCOP: c.1.10.1 Probab=32.35 E-value=24 Score=14.97 Aligned_cols=116 Identities=8% Similarity=0.041 Sum_probs=58.7 Q ss_pred HHHHHHHHHHCCCCEEEEECC-------CHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC Q ss_conf 899999999869989999167-------9877899999998-55723321124454433446788998853100133321 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAI-------KVKDFVPLIKLCQ-DYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVV 89 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~-------~~~~~~~~~~l~~-~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~ 89 (262) +...++...+.|+..++..|+ +.++.....+.+. ..++.+...+|+=. .+-....++.+.+++..+- T Consensus 37 l~~~i~~l~~~Gv~Gi~v~G~tGE~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~~-----~s~~~~i~~a~~a~~~Gad 111 (303) T 1xxx_A 37 AARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGT-----YDTAHSIRLAKACAAEGAH 111 (303) T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCC-----SCHHHHHHHHHHHHHHTCS T ss_pred HHHHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCC-----CCHHHHHHHHHHHHHHCCC T ss_conf 99999999977999899781346577687999999999999992898748984576-----6689999999999971698 Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHH------HHHHHHHHHH Q ss_conf 00446775533221110246789999876642044203300023------3357999853 Q gi|254780215|r 90 AIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSA------DDDMAAILQE 143 (262) Q Consensus 90 aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a------~~~~l~iL~~ 143 (262) || =+.-.+|... .|..+++..-++|...++|++++..-. ..+++..|.+ T Consensus 112 ~i-~v~~P~~~~~----~~~~i~~~~~~ia~~~~~pi~iyn~P~~~g~~~s~~~~~~L~~ 166 (303) T 1xxx_A 112 GL-LVVTPYYSKP----PQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALAS 166 (303) T ss_dssp EE-EEECCCSSCC----CHHHHHHHHHHHHTTCSSCEEEEECHHHHSSCCCHHHHHHHHT T ss_pred EE-EEECCCCCCC----CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCC T ss_conf 69-9945757898----9999999999999716998899978753577769899999656 No 128 >2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54} Probab=31.53 E-value=24 Score=14.88 Aligned_cols=18 Identities=0% Similarity=0.021 Sum_probs=9.9 Q ss_pred HHHHHHHHHCCCCCEEEC Q ss_conf 999876642044203300 Q gi|254780215|r 113 LRHIEASRITGIPLVIHS 130 (262) Q Consensus 113 ~~ql~lA~e~~~pv~iH~ 130 (262) +..-+|....+.||.... T Consensus 249 ~~~~~l~~~~~~pIa~dE 266 (377) T 2pge_A 249 SEMAALCANSPLAIALDE 266 (377) T ss_dssp HHHHHHHHHCSSCEEESG T ss_pred HHHHHHHHCCCCEEECCC T ss_conf 889999970486497678 No 129 >4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C* Probab=31.44 E-value=24 Score=14.87 Aligned_cols=21 Identities=10% Similarity=-0.001 Sum_probs=16.7 Q ss_pred CCCHHHHHHHHHHHHHHHHHH Q ss_conf 899899999999999998425 Q gi|254780215|r 236 DVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 236 ~~~~eei~~~~~~N~~~~f~~ 256 (262) +++.++..+..+-|.-+.||. T Consensus 400 gls~~eaI~~aTiNPAralGL 420 (570) T 4ubp_C 400 NFRLKRYVSKYTINPAIAQGI 420 (570) T ss_dssp HHHHHHHHHTTTHHHHHHHTC T ss_pred CCCHHHHHHHHHHHHHHHCCC T ss_conf 989999999998999998098 No 130 >1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A Probab=31.22 E-value=12 Score=16.99 Aligned_cols=22 Identities=14% Similarity=-0.053 Sum_probs=18.7 Q ss_pred HCCCHHHHHHHHHHHHHHHHHH Q ss_conf 2899899999999999998425 Q gi|254780215|r 235 KDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 235 ~~~~~eei~~~~~~N~~~~f~~ 256 (262) ..++.++..+..+.|.-+.||. T Consensus 407 ~~ls~~eal~~~T~~~A~~lg~ 428 (496) T 1rk6_A 407 GLFPLETAVWKMTGLTAAKFGL 428 (496) T ss_dssp CSSCHHHHHHTTTHHHHHHHTC T ss_pred CCCCHHHHHHHHHHHHHHHHCC T ss_conf 8999999999999999998399 No 131 >2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 1g6c_A* 1g4e_A* 1g69_A* 1g4s_A* 1g4p_A* 1g67_A* Probab=30.94 E-value=25 Score=14.81 Aligned_cols=71 Identities=15% Similarity=0.217 Sum_probs=39.9 Q ss_pred CHHHHHHHHHHHHHHHHCCCCCEEECHHH-------H------HH-HHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCC Q ss_conf 10246789999876642044203300023-------3------35-7999853100036753311214640234432103 Q gi|254780215|r 105 IEEQKVVFLRHIEASRITGIPLVIHSRSA-------D------DD-MAAILQEEMKKGPFPFVIHCFSSSQKLADICLEL 170 (262) Q Consensus 105 ~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a-------~------~~-~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~ 170 (262) .+...+..++..+++++++.+++||.+-. . .+ -....+... +.. ++-+=..+.+.+++..+. T Consensus 60 ~~~~~~la~~l~~~~~~~~~~liInd~~~lA~~~~adGvHl~~~d~~~~~~r~~~---~~~-iig~S~h~~~e~~~A~~~ 135 (227) T 2tps_A 60 GEARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAI---GDM-ILGVSAHTMSEVKQAEED 135 (227) T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEESCHHHHHHHTCSEEEECTTSSCHHHHHHHH---TTS-EEEEEECSHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCEEEECCCCCCHHHHHHHC---CCE-EEEEECCCHHHHHHHHHC T ss_conf 9999999999999999829979985859999871998899896544189998742---655-999956368999999867 Q ss_pred CC-EEECCCC Q ss_conf 52-0202332 Q gi|254780215|r 171 GG-YISFTGM 179 (262) Q Consensus 171 g~-y~S~~g~ 179 (262) |+ |++||+. T Consensus 136 g~dYv~~gpv 145 (227) T 2tps_A 136 GADYVGLGPI 145 (227) T ss_dssp TCSEEEECCS T ss_pred CCCEEEECCC T ss_conf 9987985475 No 132 >2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} Probab=30.93 E-value=25 Score=14.81 Aligned_cols=85 Identities=9% Similarity=-0.046 Sum_probs=45.6 Q ss_pred HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH Q ss_conf 99876642044203300023335799985310003675331121464023443210352020233221133322333321 Q gi|254780215|r 114 RHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFPKYDALRAIAR 193 (262) Q Consensus 114 ~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~ 193 (262) +-|..|++++..+.+=.-...-.-++.+.+.......-..+|.-..-.+.++++.+.|+-.=++|.++. ++++ T Consensus 85 ~al~~a~~~~~kiavvgf~~~~~~~~~i~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~~-------~~A~ 157 (196) T 2q5c_A 85 RAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKTVT-------DEAI 157 (196) T ss_dssp HHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHHHH-------HHHH T ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEECCHHHH-------HHHH T ss_conf 999999975897899967850158999999859955999966889999999999986998999987999-------9999 Q ss_pred CCCCCCEEEEEC Q ss_conf 056671798307 Q gi|254780215|r 194 GIPMDRVLVETD 205 (262) Q Consensus 194 ~iPldriLlETD 205 (262) ...+.-++++|. T Consensus 158 ~~Gl~~ili~Sg 169 (196) T 2q5c_A 158 KQGLYGETINSG 169 (196) T ss_dssp HTTCEEEECCCC T ss_pred HCCCCEEEEECC T ss_conf 859978999654 No 133 >3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* Probab=30.91 E-value=13 Score=16.67 Aligned_cols=23 Identities=22% Similarity=0.329 Sum_probs=20.0 Q ss_pred HHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 72899899999999999998425 Q gi|254780215|r 234 EKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 234 i~~~~~eei~~~~~~N~~~~f~~ 256 (262) -.+++.++..+..+.|.-++||. T Consensus 355 ~~~ls~~eal~~~T~~~A~~lgl 377 (456) T 3ls9_A 355 EKWLSARELLRMATRGSAECLGR 377 (456) T ss_dssp GGSCCHHHHHHHTTHHHHHHTTC T ss_pred CCCCCHHHHHHHHHHHHHHHCCC T ss_conf 35889999999995999998199 No 134 >3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} Probab=30.80 E-value=14 Score=16.42 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=23.4 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 4999999999872899899999999999998425 Q gi|254780215|r 223 YVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 223 ~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ....-+..+. -.|++.+++.+..+.|.-+++|. T Consensus 314 ~~~~~~~~~~-~~gls~~eal~~~T~~~A~~lgl 346 (396) T 3ooq_A 314 FATVQAATAM-RYGAKEEDLLKILTVNPAKILGL 346 (396) T ss_dssp GHHHHHHHGG-GGTCCHHHHHHTTTHHHHHHTTC T ss_pred HHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHCC T ss_conf 3999999999-84999999999999999999699 No 135 >3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae} Probab=30.47 E-value=25 Score=14.76 Aligned_cols=104 Identities=11% Similarity=0.113 Sum_probs=53.6 Q ss_pred HHHHHHHHHHCCCCEEEEECCC-------HHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC Q ss_conf 8999999998699899991679-------877899999998557-23321124454433446788998853100133321 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAIK-------VKDFVPLIKLCQDYP-SSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVV 89 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~~-------~~~~~~~~~l~~~~p-~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~ 89 (262) +...++...+.|+..++..|++ .++..+..+.+.+.- +.+-..+|+-.. ...+..+......... .. T Consensus 30 l~~~i~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~g~~~~----~~~~~~~la~~a~~~g-~~ 104 (311) T 3h5d_A 30 IPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTN----DTRDSIEFVKEVAEFG-GF 104 (311) T ss_dssp HHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCS----SHHHHHHHHHHHHHSC-CC T ss_pred HHHHHHHHHHCCCCEEEECEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCC----HHHHHHHHHHHHHHHH-CC T ss_conf 999999999869998996862350665899999999999999845888689855762----0255589999998863-34 Q ss_pred EECCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH Q ss_conf 0044677-55332211102467899998766420442033000 Q gi|254780215|r 90 AIGETGL-DRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR 131 (262) Q Consensus 90 aIGEiGL-D~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r 131 (262) ++. +.+ .||... .|.+++...-++|..-++|++++.. T Consensus 105 ~~~-~~~~P~~~~~----s~~~l~~~f~~ia~~~~lPi~lYn~ 142 (311) T 3h5d_A 105 AAG-LAIVPYYNKP----SQEGMYQHFKAIADASDLPIIIYNI 142 (311) T ss_dssp SEE-EEECCCSSCC----CHHHHHHHHHHHHHSCSSCEEEEEC T ss_pred CCC-CCCCCCCCCC----CHHHHHHHHHHHHHCCCCCEEEEEC T ss_conf 641-1358888898----9999999999997148996899967 No 136 >3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A Probab=30.24 E-value=25 Score=14.74 Aligned_cols=142 Identities=9% Similarity=-0.017 Sum_probs=68.9 Q ss_pred HHHHHHHHHHCCCCEEEEECC-------CHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC Q ss_conf 899999999869989999167-------987789999999855-723321124454433446788998853100133321 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAI-------KVKDFVPLIKLCQDY-PSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVV 89 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~-------~~~~~~~~~~l~~~~-p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~ 89 (262) +.+.++...+.|+..++..|+ +.++..++.+.+.+. .+.+...+|+=. ...++..+ +.+.+.+-.+. T Consensus 31 l~~~i~~l~~~Gv~gi~~~G~~GE~~~Ls~~Er~~~~~~~~~~~~~~~~vi~gv~~----~s~~~~i~-~a~~a~~~G~d 105 (309) T 3fkr_A 31 QKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSH----YSTQVCAA-RSLRAQQLGAA 105 (309) T ss_dssp HHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC----SSHHHHHH-HHHHHHHTTCS T ss_pred HHHHHHHHHHCCCCEEEECEECCCHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCC----CCHHHHHH-HHHHHHHCCCC T ss_conf 99999999975999899783533346579999999999999871799608996787----86899999-99997434998 Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHH------HHHHHHHHHHHHHHCCCCCCCCEECCCCHHH Q ss_conf 0044677553322111024678999987664204420330002------3335799985310003675331121464023 Q gi|254780215|r 90 AIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRS------ADDDMAAILQEEMKKGPFPFVIHCFSSSQKL 163 (262) Q Consensus 90 aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~------a~~~~l~iL~~~~~~~~~~~i~H~FsG~~~~ 163 (262) ++ =+.-.||+.. ..-.|.++++..-++|...++|++|+.-- ...++++.+.++. ...++...-+|+.+. T Consensus 106 ~~-lv~pP~y~~~-~~~~~~~i~~~~~~ia~~~~lpiiiYn~P~~~~~~~~~~l~~~l~~~p---nv~gik~~~~~~~~~ 180 (309) T 3fkr_A 106 MV-MAMPPYHGAT-FRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAREIE---QVAYFXIETPGAANK 180 (309) T ss_dssp EE-EECCSCBTTT-BCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHHHST---TEEEEEECSSSHHHH T ss_pred EE-EECCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCC---CEEEEEECCCCCHHH T ss_conf 78-8548744567-788999999999999722488769851676557778899999985067---758998257884999 Q ss_pred HHHHHC Q ss_conf 443210 Q gi|254780215|r 164 ADICLE 169 (262) Q Consensus 164 ~~~~l~ 169 (262) +.+.+. T Consensus 181 ~~~~~~ 186 (309) T 3fkr_A 181 LRELIR 186 (309) T ss_dssp HHHHHH T ss_pred HHHHHH T ss_conf 999999 No 137 >2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3mkv_A* Probab=30.16 E-value=16 Score=16.14 Aligned_cols=22 Identities=9% Similarity=0.140 Sum_probs=19.5 Q ss_pred HCCCHHHHHHHHHHHHHHHHHH Q ss_conf 2899899999999999998425 Q gi|254780215|r 235 KDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 235 ~~~~~eei~~~~~~N~~~~f~~ 256 (262) .+++.+++.+..+.|.-+.||. T Consensus 344 ~gls~~eal~~~T~npA~~lgl 365 (426) T 2r8c_A 344 EVLSPAEVIASATIVSAEVLGM 365 (426) T ss_dssp TTSCHHHHHHHTTHHHHHHTTC T ss_pred HCCCHHHHHHHHHHHHHHHHCC T ss_conf 0999999999999999999599 No 138 >3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.63A {Unidentified} Probab=30.04 E-value=15 Score=16.28 Aligned_cols=24 Identities=8% Similarity=0.137 Sum_probs=20.5 Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 872899899999999999998425 Q gi|254780215|r 233 KEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 233 ~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ...+++.+++.+..+.|.-+.||. T Consensus 339 ~~~~ls~~eal~~~T~n~A~~lgl 362 (423) T 3feq_A 339 RAEVLGNLEALRSATTVAAEIVNM 362 (423) T ss_dssp HHTTSCHHHHHHTTTHHHHHHTTC T ss_pred HHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 985999999999999999999499 No 139 >1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, JCSG, protein structure initiative, PSI; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 Probab=29.95 E-value=26 Score=14.70 Aligned_cols=38 Identities=13% Similarity=0.224 Sum_probs=26.8 Q ss_pred HHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHC Q ss_conf 78999987664204420330002333579998531000 Q gi|254780215|r 110 VVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKK 147 (262) Q Consensus 110 ~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~ 147 (262) +.+..-++.|.+.++|+++=+-+-..+-++.+++..++ T Consensus 64 ~~~~~~l~~~~~~~~plViGTTG~~~~~~~~l~~~~~~ 101 (228) T 1vm6_A 64 EALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKE 101 (228) T ss_dssp GGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTT T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCC T ss_conf 03355689998638764998068887899999998241 No 140 >1t57_A Conserved protein MTH1675; structural genomics, FMN, methanobacterium thermoautotrophicum, PSI; HET: FMN; 2.30A {Methanothermobacterthermautotrophicus} SCOP: c.49.1.2 Probab=29.80 E-value=26 Score=14.69 Aligned_cols=61 Identities=20% Similarity=0.154 Sum_probs=39.2 Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC----CCCCHHHHHHHHH Q ss_conf 6899999999869989999167987789999999855723321124454433----4467889988531 Q gi|254780215|r 17 DRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHA----HEENEVLVDELVC 81 (262) Q Consensus 17 d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~----~~~~~~~~~~l~~ 81 (262) -++..++||.+.||.+++..+++-+.-.++++.. .+.+ .++.-|+=+. .+..++..+.|++ T Consensus 39 tl~la~erA~e~gIk~iVVAStsG~TA~k~~e~~---~~~l-VvVTh~~GF~~pg~~e~~~e~~~~L~~ 103 (206) T 1t57_A 39 VLELVGERADQLGIRNFVVASVSGETALRLSEMV---EGNI-VSVTHHAGFREKGQLELEDEARDALLE 103 (206) T ss_dssp HHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTC---CSEE-EEECCCTTSSSTTCCSSCHHHHHHHHH T ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC---CCCE-EEEECCCCCCCCCCCCCCHHHHHHHHH T ss_conf 9999999999869977999718877999999865---8979-999064688999834279999999997 No 141 >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} Probab=29.65 E-value=26 Score=14.67 Aligned_cols=78 Identities=19% Similarity=0.279 Sum_probs=48.3 Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC----------HHHHHHHHHHCCCC Q ss_conf 68999999998699899991679877899999998557233211244544334467----------88998853100133 Q gi|254780215|r 17 DRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEEN----------EVLVDELVCLASHP 86 (262) Q Consensus 17 d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~----------~~~~~~l~~l~~~~ 86 (262) +..+++....+ +.+.+|..+... +...++++|.+. +..|.-..+.||.-.... -..-..+++..... T Consensus 72 N~~~~L~~~l~-~~D~VVNls~~~-~s~~I~~aC~e~-Gv~YlDts~e~W~~~~~~~~~~~~~rt~Y~~~~~l~~~~~~a 148 (480) T 2ph5_A 72 NYLEVIGSTLE-ENDFLIDVSIGI-SSLALIILCNQK-GALYINAATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKT 148 (480) T ss_dssp THHHHTGGGCC-TTCEEEECCSSS-CHHHHHHHHHHH-TCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTC T ss_pred HHHHHHHHHHC-CCCEEEECCCCC-CCHHHHHHHHHH-CCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC T ss_conf 79999999834-799899898411-689999999984-996686313567876554557722334799999999764204 Q ss_pred CCCEECCCCCC Q ss_conf 32100446775 Q gi|254780215|r 87 RVVAIGETGLD 97 (262) Q Consensus 87 ~~~aIGEiGLD 97 (262) ...||-++|++ T Consensus 149 G~TAvv~~Gan 159 (480) T 2ph5_A 149 QKTALITHGAN 159 (480) T ss_dssp CSCEECSCBTT T ss_pred CCEEEECCCCC T ss_conf 97275347889 No 142 >2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} Probab=29.63 E-value=22 Score=15.21 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=19.8 Q ss_pred HHHHHHHHHHCCCCCEEECHHHHHHHHHHH Q ss_conf 999987664204420330002333579998 Q gi|254780215|r 112 FLRHIEASRITGIPLVIHSRSADDDMAAIL 141 (262) Q Consensus 112 F~~ql~lA~e~~~pv~iH~r~a~~~~l~iL 141 (262) .-..++-+.+.+..|.|||..+-...--+. T Consensus 86 ~~~fI~~~~~~~~~VLVHC~~G~sRS~tiv 115 (188) T 2esb_A 86 IADHIHSVEMKQGRTLLHCAAGVSRSAALC 115 (188) T ss_dssp HHHHHHHHHHTTCCEEEECSSSSSHHHHHH T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCHHHH T ss_conf 999999998568718998188886769999 No 143 >1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A Probab=29.07 E-value=27 Score=14.61 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=28.6 Q ss_pred CCCCCEECCCC-HHHHHHHHCCCC-EEECCCCCCHHHHHHHHHHHHCCC Q ss_conf 75331121464-023443210352-020233221133322333321056 Q gi|254780215|r 150 FPFVIHCFSSS-QKLADICLELGG-YISFTGMITFPKYDALRAIARGIP 196 (262) Q Consensus 150 ~~~i~H~FsG~-~~~~~~~l~~g~-y~S~~g~i~~~~~~~~~e~v~~iP 196 (262) .+.++|.=||. .++.++++++|. .+-|+..+...=...+++.++.=| T Consensus 259 ~~LVlHGgSGip~e~i~~ai~~GV~KiNi~T~lr~a~~~air~~~~~n~ 307 (358) T 1dos_A 259 LNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANE 307 (358) T ss_dssp SCEEECSCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHHG T ss_pred CCEECCCCCCCCHHHHHHHHHHCEEEHHHCHHHHHHHHHHHHHHHHHCH T ss_conf 2213269999999999999971603010164999999999999998484 No 144 >1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A* Probab=28.72 E-value=25 Score=14.85 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=22.0 Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHH---HHHHHHHHHHCCCCCCCCEECCCCH Q ss_conf 6789999876642044203300023335---7999853100036753311214640 Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSADDD---MAAILQEEMKKGPFPFVIHCFSSSQ 161 (262) Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a~~~---~l~iL~~~~~~~~~~~i~H~FsG~~ 161 (262) ...+...+.++. -+.|+++||--.-+. +.-+|...... +...|++=|.-|. T Consensus 160 ~~~~~~~~~~~~-~~~pvLfHCtaGKDRTGv~aALlL~llGV-~~e~I~~DYllSn 213 (296) T 1ywf_A 160 QRALHRVVTLLA-AGRPVLTHCFAGKDRTGFVVALVLEAVGL-DRDVIVADYLRSN 213 (296) T ss_dssp HHHHHHHHHHHH-TTCCEEEECSSSSSHHHHHHHHHHHHTTC-CHHHHHHHHHGGG T ss_pred HHHHHHHHHHHC-CCCCEEEECCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHH T ss_conf 999999998615-79867875588885047999999998399-9999999998755 No 145 >2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* Probab=28.68 E-value=27 Score=14.56 Aligned_cols=18 Identities=11% Similarity=0.206 Sum_probs=8.3 Q ss_pred HHHHHHHHCCCCCEEECH Q ss_conf 998766420442033000 Q gi|254780215|r 114 RHIEASRITGIPLVIHSR 131 (262) Q Consensus 114 ~ql~lA~e~~~pv~iH~r 131 (262) .-.++|.+.+||+.|-.. T Consensus 299 ~l~~~a~~~gKpialtE~ 316 (396) T 2vx5_A 299 QLVQIARSKGKIAALTET 316 (396) T ss_dssp HHHHHHHHHTCEEEEEEE T ss_pred HHHHHHHCCCCEEEECCC T ss_conf 999986127983998256 No 146 >2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrolase; HET: GUN; 2.05A {Clostridium acetobutylicum atcc 824} SCOP: b.92.1.4 c.1.9.9 Probab=28.58 E-value=13 Score=16.73 Aligned_cols=24 Identities=21% Similarity=0.199 Sum_probs=20.5 Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 289989999999999999842568 Q gi|254780215|r 235 KDVSYEDLMEETTKNALKLFSKIS 258 (262) Q Consensus 235 ~~~~~eei~~~~~~N~~~~f~~~~ 258 (262) .+++.+++.+..+.|.-++||++. T Consensus 352 ~gls~~eal~~~T~n~A~~lg~~G 375 (439) T 2i9u_A 352 MFLSTSEAFYMATKKGGSFFGKVG 375 (439) T ss_dssp CCCCHHHHHHHHTHHHHTTTSSCS T ss_pred CCCCHHHHHHHHHHHHHHHHCCCC T ss_conf 799999999999999999839971 No 147 >3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A* Probab=28.38 E-value=14 Score=16.47 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=18.8 Q ss_pred HCCCHHHHHHHHHHHHHHHHHH Q ss_conf 2899899999999999998425 Q gi|254780215|r 235 KDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 235 ~~~~~eei~~~~~~N~~~~f~~ 256 (262) ..++.++..+..+.|.-+.||. T Consensus 393 ~~ls~~eal~~~T~n~A~~lg~ 414 (480) T 3gip_A 393 RLMTLEQAVARMTALPARVFGF 414 (480) T ss_dssp CSSCHHHHHHHHTHHHHHHHTC T ss_pred CCCCHHHHHHHHHHHHHHHHCC T ss_conf 8999999999999999998499 No 148 >1ejx_C Urease alpha subunit; alpha-beta barrel, nickel metalloenzyme, temperature dependent structural changes, hydrolase; HET: KCX; 1.60A {Klebsiella aerogenes} SCOP: b.92.1.1 c.1.9.2 PDB: 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1ef2_A* 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1ejr_C* 1krc_C 1krb_C* 1fwi_C* 1fwa_C* 1fwb_C* 1fwc_C* 1fwd_C* 1fwe_C* 1fwg_C* 1a5k_C ... Probab=28.36 E-value=27 Score=14.53 Aligned_cols=21 Identities=10% Similarity=0.031 Sum_probs=17.0 Q ss_pred CCCHHHHHHHHHHHHHHHHHH Q ss_conf 899899999999999998425 Q gi|254780215|r 236 DVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 236 ~~~~eei~~~~~~N~~~~f~~ 256 (262) +++.+++.+..+.|.-+.+|. T Consensus 397 gls~~eal~~aTiNPAralGl 417 (567) T 1ejx_C 397 NFRVKRYIAKYTINPALTHGI 417 (567) T ss_dssp HHHHHHHHHHHTHHHHHHTTC T ss_pred CCCHHHHHHHHHHHHHHHCCC T ss_conf 999999999998999998198 No 149 >3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural genomics, protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* Probab=28.18 E-value=18 Score=15.75 Aligned_cols=28 Identities=11% Similarity=0.124 Sum_probs=22.2 Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99999872899899999999999998425 Q gi|254780215|r 228 AKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 228 ~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) +..+.+ .+++.+++.+..+.|.-++||. T Consensus 330 ~~~~~~-~gls~~eal~~~T~npA~~lgl 357 (408) T 3be7_A 330 FAYMVE-WGMTPLEAIQASTIKTATLFGI 357 (408) T ss_dssp HHHHHH-TTCCHHHHHHTTTHHHHHHHTC T ss_pred HHHHHH-CCCCHHHHHHHHHHHHHHHHCC T ss_conf 999998-3999999999999999999599 No 150 >2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661} Probab=28.12 E-value=28 Score=14.50 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=52.2 Q ss_pred CHHHHHHHHHHCCCCEEEEECC-------CHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC Q ss_conf 6899999999869989999167-------987789999999855-72332112445443344678899885310013332 Q gi|254780215|r 17 DRHDVIMRAHQANVLKMIAIAI-------KVKDFVPLIKLCQDY-PSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRV 88 (262) Q Consensus 17 d~~~~i~~a~~~gv~~~i~~~~-------~~~~~~~~~~l~~~~-p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~ 88 (262) .+...++...+.|+..++..|+ +.++..+..+.+.+. ++.+...+|+=.. ...+..+ +.+.++ T Consensus 22 ~~~~~i~~~~~~Gv~gi~~~G~tgE~~~Ls~~Er~~l~~~~~~~~~~r~~vi~g~~~~----s~~~ai~-~a~~a~---- 92 (289) T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSN----CTEEAIE-LSVFAE---- 92 (289) T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCS----SHHHHHH-HHHHHH---- T ss_pred HHHHHHHHHHHCCCCEEEECEECCCHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCC----CHHHHHH-HHHHHH---- T ss_conf 9999999999769998997844303544899999999999999828996089736874----5999999-999999---- Q ss_pred CEECCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHCCCCCEEEC Q ss_conf 100446775533---221110246789999876642044203300 Q gi|254780215|r 89 VAIGETGLDRYH---NAHTIEEQKVVFLRHIEASRITGIPLVIHS 130 (262) Q Consensus 89 ~aIGEiGLD~~~---~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~ 130 (262) +.|-|..- .....-.|.++++..-++|...++|++++- T Consensus 93 ----~~Gad~v~v~~P~~~~~~~~~i~~~~~~ia~~~~~pi~iy~ 133 (289) T 2yxg_A 93 ----DVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYN 133 (289) T ss_dssp ----HHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEE T ss_pred ----HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE T ss_conf ----77999999889878899999999999999964799889997 No 151 >2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum usda 110} SCOP: b.92.1.4 c.1.9.9 Probab=27.55 E-value=14 Score=16.54 Aligned_cols=26 Identities=12% Similarity=-0.146 Sum_probs=21.7 Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99872899899999999999998425 Q gi|254780215|r 231 LAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 231 iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ...-.+++.++..+..+.|.-++||. T Consensus 366 ~~~~~~ls~~eal~~~T~~~A~~lgl 391 (475) T 2ood_A 366 EAERNKLSPYRGFWSVTLGGAEGLYI 391 (475) T ss_dssp HHHHTCCCHHHHHHHTTHHHHHHTTC T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 76524999999999998999998199 No 152 >2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A Probab=27.01 E-value=29 Score=14.37 Aligned_cols=53 Identities=13% Similarity=0.067 Sum_probs=38.6 Q ss_pred CCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHC-CCCEEECC Q ss_conf 44203300023335799985310003675331121464023443210-35202023 Q gi|254780215|r 123 GIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSSQKLADICLE-LGGYISFT 177 (262) Q Consensus 123 ~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~-~g~y~S~~ 177 (262) +.-++.-+.+-..|+.+.|++|..... .=+|..+|+.+.++++.+ .|++++-. T Consensus 78 ~v~~v~IsvDP~~Dtpe~l~~y~~~~~--~~~~~Ltg~~~~i~~l~~~~gv~~~~~ 131 (200) T 2b7k_A 78 TLQPLFITCDPARDSPAVLKEYLSDFH--PSILGLTGTFDEVKNACKKYRVYFSTP 131 (200) T ss_dssp CCEEEEEESCTTTCCHHHHHHHHTTSC--TTCEEEECCHHHHHHHHHHTTC----- T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHCC--CCCEECCCCHHHHHHHHHHCCCEEEEC T ss_conf 323320347856678899999997048--861202599999999999759569845 No 153 >2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A* Probab=26.84 E-value=29 Score=14.35 Aligned_cols=129 Identities=10% Similarity=0.018 Sum_probs=67.7 Q ss_pred HHCCHHHHHHHHHHCCCCEEEEE-----CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC---CCCC----HHHHHHHHH Q ss_conf 52268999999998699899991-----67987789999999855723321124454433---4467----889988531 Q gi|254780215|r 14 FDEDRHDVIMRAHQANVLKMIAI-----AIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHA---HEEN----EVLVDELVC 81 (262) Q Consensus 14 ~~~d~~~~i~~a~~~gv~~~i~~-----~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~---~~~~----~~~~~~l~~ 81 (262) ...|..++|+++.+.|...+=.. ..+..+.....+..+++.-.+. .+++|... ...+ +..++.+++ T Consensus 34 ~~~d~~~~i~~~ae~Gfd~iEl~~~~~~~~~~~~~~~lk~~l~~~gL~i~--~~~~~~~~~~~~s~d~~~r~~~i~~l~~ 111 (309) T 2hk0_A 34 WSAKFGPYIEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILT--AGIGPSKTKNLSSEDAAVRAAGKAFFER 111 (309) T ss_dssp TTSCSHHHHHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEE--EECCCCSSSCSSCSCHHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEE--EEECCCCCCCCCCCCHHHHHHHHHHHHH T ss_conf 89899999999998499989967676664899999999999998499899--9626876789899899999999999999 Q ss_pred HCCC------CCCCEE--CCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHCCCCCEEEC--------HHHHHHHHHHHH Q ss_conf 0013------332100--44677553322---1110246789999876642044203300--------023335799985 Q gi|254780215|r 82 LASH------PRVVAI--GETGLDRYHNA---HTIEEQKVVFLRHIEASRITGIPLVIHS--------RSADDDMAAILQ 142 (262) Q Consensus 82 l~~~------~~~~aI--GEiGLD~~~~~---~~~e~Q~~vF~~ql~lA~e~~~pv~iH~--------r~a~~~~l~iL~ 142 (262) .+.. +.++.+ +-.+.++.... ..++...+.+++-.++|++++..+.+.. .....++.++++ T Consensus 112 ~ie~A~~lGa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~A~~~Gv~l~iE~~~~~~~~~~~t~~~~~~ll~ 191 (309) T 2hk0_A 112 TLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNRFENHVLNTAAEGVAFVK 191 (309) T ss_dssp HHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHH T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHH T ss_conf 99999982998898416788677788876899999999999999999998617644788447645535699999742100 Q ss_pred HH Q ss_conf 31 Q gi|254780215|r 143 EE 144 (262) Q Consensus 143 ~~ 144 (262) .. T Consensus 192 ~v 193 (309) T 2hk0_A 192 DV 193 (309) T ss_dssp HH T ss_pred CC T ss_conf 00 No 154 >3g8r_A Probable spore coat polysaccharide biosynthesis protein E; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472} Probab=26.36 E-value=30 Score=14.29 Aligned_cols=64 Identities=16% Similarity=0.273 Sum_probs=33.2 Q ss_pred HHHHHHHCCCCCEEECHHH-HHHHHHHHHHHHHCCCCCCCCEECCCC--------HHHHHHHHC-C-CCEEECCC Q ss_conf 9876642044203300023-335799985310003675331121464--------023443210-3-52020233 Q gi|254780215|r 115 HIEASRITGIPLVIHSRSA-DDDMAAILQEEMKKGPFPFVIHCFSSS--------QKLADICLE-L-GGYISFTG 178 (262) Q Consensus 115 ql~lA~e~~~pv~iH~r~a-~~~~l~iL~~~~~~~~~~~i~H~FsG~--------~~~~~~~l~-~-g~y~S~~g 178 (262) .|+-....++|++|=+-.+ ..|+-+.+.-....+..-+++||+++= ...++.+.+ . ++-+|||. T Consensus 127 Li~~i~~~~kpiiiStG~~~~~eI~~a~~~~~~~~~~~~llhc~s~YPt~~ed~nL~~I~~Lk~~~~~~~vGySD 201 (350) T 3g8r_A 127 LLERIARSDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYST 201 (350) T ss_dssp HHHHHHTSCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEE T ss_pred HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHCCCCEEEECC T ss_conf 999985005876123477788886666665532587699961477789983774712354478753678578788 No 155 >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A Probab=26.23 E-value=30 Score=14.28 Aligned_cols=32 Identities=6% Similarity=0.209 Sum_probs=19.7 Q ss_pred HHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH Q ss_conf 78999987664204420330002333579998 Q gi|254780215|r 110 VVFLRHIEASRITGIPLVIHSRSADDDMAAIL 141 (262) Q Consensus 110 ~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL 141 (262) +.+.+.++++.+.+.+|.|||..+-+.+--++ T Consensus 256 e~v~~Fi~~~~~~~~~V~VHC~AGlGRTGtlI 287 (348) T 1ohe_A 256 AIVKEFLDICENAEGAIAVHSKAGLGRTGTLI 287 (348) T ss_dssp HHHHHHHHHHHSCSSEEEEECSSSSHHHHHHH T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH T ss_conf 99999999998569959998899997699999 No 156 >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 Probab=26.11 E-value=30 Score=14.26 Aligned_cols=58 Identities=10% Similarity=0.129 Sum_probs=30.5 Q ss_pred EEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHH-----------HHHHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 86138887565226899999999869989999167987-----------78999999985572332112445443 Q gi|254780215|r 4 DTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVK-----------DFVPLIKLCQDYPSSIFCSVGTHPCH 67 (262) Q Consensus 4 D~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~-----------~~~~~~~l~~~~p~~i~~a~GiHP~~ 67 (262) |+|..+ ..++++++...+.+++.++..|--.. .....++..+..+..++...|=|++. T Consensus 33 DiHgn~------~ale~vl~~~~~~~~D~ii~lGDlv~~gp~~~~~~~~~~~~~l~~l~~~~~~~~~V~GNhD~~ 101 (208) T 1su1_A 33 DIHGSL------PATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSE 101 (208) T ss_dssp CCTTBH------HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCH T ss_pred ECCCCH------HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCEEEECCCCCHH T ss_conf 168998------999999999875699889991660133765201111280999999985499679964778378 No 157 >1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8 Probab=26.02 E-value=12 Score=16.93 Aligned_cols=16 Identities=6% Similarity=0.262 Sum_probs=11.3 Q ss_pred HHHHHHHHHHHHHHHH Q ss_conf 9999999998425687 Q gi|254780215|r 244 EETTKNALKLFSKISE 259 (262) Q Consensus 244 ~~~~~N~~~~f~~~~~ 259 (262) ..-++|+++++..+++ T Consensus 287 ~~Ry~sY~~l~~E~~~ 302 (307) T 1t9h_A 287 QYRYDHYVEFMTEIKD 302 (307) T ss_dssp HHHHHHHHHHHHHHHT T ss_pred HHHHHHHHHHHHHHHH T ss_conf 9999999999999987 No 158 >3gy1_A Mandelate racemase/muconate lactonizing protein; structural genomics, protein structure initiative, NYSGXRC, enolase, PSI- 2; 1.60A {Clostridium beijerinckii ncimb 8052} PDB: 3dfh_A Probab=25.53 E-value=31 Score=14.20 Aligned_cols=25 Identities=16% Similarity=0.109 Sum_probs=19.6 Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHH Q ss_conf 6789999876642044203300023 Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSA 133 (262) Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a 133 (262) ..-+.+..++|.++++++++|+-.. T Consensus 289 it~~~ki~~lA~~~gi~v~~h~~~~ 313 (408) T 3gy1_A 289 ITPALKLGSLCAAFGVRIAWHTPSD 313 (408) T ss_dssp HHHHHHHHHHHHHTTCEECCCCCSS T ss_pred HHHHHHHHHHHHHCCCEEEECCCCC T ss_conf 5499999999998699698607765 No 159 >2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 Probab=24.70 E-value=14 Score=16.48 Aligned_cols=23 Identities=9% Similarity=0.124 Sum_probs=19.2 Q ss_pred HHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 72899899999999999998425 Q gi|254780215|r 234 EKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 234 i~~~~~eei~~~~~~N~~~~f~~ 256 (262) -.+++.++..+..+.|.-++||. T Consensus 378 ~~~ls~~eal~~~T~~~A~~lgl 400 (492) T 2paj_A 378 AGAASIAEVIHWGTAGGARVMGL 400 (492) T ss_dssp ---CCHHHHHHHHTHHHHHHHTC T ss_pred CCCCCHHHHHHHHHHHHHHHHCC T ss_conf 56889999999998999998099 No 160 >3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831} Probab=24.54 E-value=32 Score=14.08 Aligned_cols=114 Identities=9% Similarity=-0.027 Sum_probs=57.8 Q ss_pred HHHHHHHHHHCCCCEEEEECCC-------HHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC Q ss_conf 8999999998699899991679-------87789999999855-723321124454433446788998853100133321 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAIK-------VKDFVPLIKLCQDY-PSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVV 89 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~~-------~~~~~~~~~l~~~~-p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~ 89 (262) +...++...+.|+..++..|++ .++..++.+.+.+. ++.+....|+.. ...+..+ +.+.+.+..+- T Consensus 35 ~~~~i~~l~~~Gv~gl~i~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~~vi~g~~~-----st~~~i~-~a~~a~~~Gad 108 (314) T 3d0c_A 35 LDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-----SVDTAIE-LGKSAIDSGAD 108 (314) T ss_dssp HHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-----SHHHHHH-HHHHHHHTTCS T ss_pred HHHHHHHHHHCCCCEEEECEECCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCC-----CHHHHHH-HHHHHHHCCCC T ss_conf 99999999976999899685000053489999999999888870995149974688-----8899999-99999972988 Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH--HHHHHHHHHHH Q ss_conf 004467755332211102467899998766420442033000--23335799985 Q gi|254780215|r 90 AIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR--SADDDMAAILQ 142 (262) Q Consensus 90 aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r--~a~~~~l~iL~ 142 (262) || =+--.+|.. -.|.+++...-++|...++|+++.-- ....++++-|. T Consensus 109 ~i-~v~~P~~~~----~~~~~i~~~f~~ia~~~~~Pi~iY~~p~~~~~~~l~~L~ 158 (314) T 3d0c_A 109 CV-MIHQPVHPY----ITDAGAVEYYRNIIEALDAPSIIYFKDAHLSDDVIKELA 158 (314) T ss_dssp EE-EECCCCCSC----CCHHHHHHHHHHHHHHSSSCEEEEECCTTSCTHHHHHHT T ss_pred EE-ECCCCCCCC----CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH T ss_conf 44-205885567----767999999999975047985777414455436999973 No 161 >3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, zinc, structural genomics; 2.00A {Staphylococcus aureus subsp} Probab=24.46 E-value=32 Score=14.07 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=24.5 Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99999999872899899999999999998425 Q gi|254780215|r 225 VNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 225 ~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ........+-.+++.+++.+.++.|.-+++|. T Consensus 331 ~~~~~~~~~~~~ls~~~al~~~T~n~A~~lGl 362 (424) T 3gri_A 331 PLLYTHFVKNGDWTLQQLVDYLTIKPCETFNL 362 (424) T ss_dssp HHHHHHHTTTSSCCHHHHHHHHTHHHHHHTTC T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 99997550048989999999999999999699 No 162 >3c2q_A Uncharacterized conserved protein; putative LOR/SDH, structural genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis S2} Probab=24.17 E-value=31 Score=14.15 Aligned_cols=90 Identities=20% Similarity=0.228 Sum_probs=43.3 Q ss_pred HHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCC-------CC Q ss_conf 53100133321004467755332211102467899998766420442033000233357999853100036-------75 Q gi|254780215|r 79 LVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGP-------FP 151 (262) Q Consensus 79 l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~-------~~ 151 (262) ++.+...++++ +|+-|.=-+....+.+ +...|. ++.-.....+|.-.=.++-.+++++++++..+.+. -+ T Consensus 68 ~r~lk~GD~VV-vG~~GI~v~~~~~~~~-~~~~F~-Fm~~~vsser~~e~~~~~ia~el~ei~~~~~k~~gg~i~~V~Gp 144 (345) T 3c2q_A 68 IRKVKKGDFVL-IGHNGIRVMPPEKSRE-AGQLFE-FMNSEVSSEKPKEAIIKRIAKEMHEIREEYKKTGTGGIAIVGGP 144 (345) T ss_dssp GGGCCTTCEEE-ESSSSEEECCCC---------------CCCCSCSCHHHHHHHHHHHHHHHHHHHHHHSSCCEEEEECT T ss_pred CCCCCCCCEEE-ECCCEEEECCCCCCCC-CCCEEE-ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC T ss_conf 55467799799-8897449788887876-676257-43778767774365899999999999997644279759999789 Q ss_pred CCCEECCCCHHHHHHHHCCCCE Q ss_conf 3311214640234432103520 Q gi|254780215|r 152 FVIHCFSSSQKLADICLELGGY 173 (262) Q Consensus 152 ~i~H~FsG~~~~~~~~l~~g~y 173 (262) .++| +|+.+-+.++++.||- T Consensus 145 avvh--tg~~~ala~Lir~GYv 164 (345) T 3c2q_A 145 AIIH--TGGGPALAKMVELGYI 164 (345) T ss_dssp HHHH--TTCHHHHHHHHHTTCC T ss_pred EEEE--CCCHHHHHHHHHCCCC T ss_conf 7996--6968999999982964 No 163 >2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA; 2.00A {Aquifex aeolicus VF5} Probab=24.12 E-value=33 Score=14.02 Aligned_cols=24 Identities=25% Similarity=0.288 Sum_probs=11.3 Q ss_pred EECCCCHHHHHHHHCC--CC--EEECCC Q ss_conf 1214640234432103--52--020233 Q gi|254780215|r 155 HCFSSSQKLADICLEL--GG--YISFTG 178 (262) Q Consensus 155 H~FsG~~~~~~~~l~~--g~--y~S~~g 178 (262) =+-+-+.+-++++.+. || ++|..| T Consensus 154 vsp~t~~~ri~~i~~~s~gfiY~vs~~G 181 (262) T 2ekc_A 154 GAPTSTRKRIKLICEAADEMTYFVSVTG 181 (262) T ss_dssp ECTTCCHHHHHHHHHHCSSCEEEESSCC T ss_pred CCCCCHHHHHHHHHHCCCCEEEEEECCC T ss_conf 5888868888888751564267721356 No 164 >1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} SCOP: c.72.1.2 PDB: 3hpd_A Probab=23.88 E-value=33 Score=13.99 Aligned_cols=95 Identities=18% Similarity=0.214 Sum_probs=48.0 Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHH--H Q ss_conf 32112445443344678899885310013332100446775533221110246789999876642044203300023--3 Q gi|254780215|r 57 IFCSVGTHPCHAHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSA--D 134 (262) Q Consensus 57 i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a--~ 134 (262) +..++|-.|--+.... +.+ ++......+.|| +|+ ..+.+.+....-.+.|.+.++|+++--+.. - T Consensus 33 ~~La~GasPiMa~~~~--E~~---~~~~~a~al~in-~Gt-------l~~~~~~~~~~a~~~A~~~~~PvVLDpvgv~as 99 (265) T 1v8a_A 33 ALLALGASPVMAHAEE--ELE---EMIRLADAVVIN-IGT-------LDSGWRRSMVKATEIANELGKPIVLDPVGAGAT 99 (265) T ss_dssp HHHHHTCEEEECCCTT--THH---HHHHHCSEEEEE-CTT-------CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTB T ss_pred HHHHCCCCCHHCCCHH--HHH---HHHHHCCCEEEE-CCC-------CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC T ss_conf 9983089812219988--899---999756855886-787-------998999999999999997199999808766855 Q ss_pred HHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHC Q ss_conf 35799985310003675331121464023443210 Q gi|254780215|r 135 DDMAAILQEEMKKGPFPFVIHCFSSSQKLADICLE 169 (262) Q Consensus 135 ~~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~ 169 (262) ..-.++.++..... ..| .+|+...+..++. T Consensus 100 ~~r~~~~~~ll~~~--~~v---ItpN~~Ei~~L~g 129 (265) T 1v8a_A 100 KFRTRVSLEILSRG--VDV---LKGNFGEISALLG 129 (265) T ss_dssp HHHHHHHHHHHHHC--CSE---EEEEHHHHHHHHH T ss_pred HHHHHHHHHHHHCC--CCE---ECCCHHHHHHHHC T ss_conf 77899999987258--876---5679999999967 No 165 >1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A* Probab=23.80 E-value=33 Score=13.98 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=51.1 Q ss_pred HHHHHHHHHHCCCCEEEEECCC-------HHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC Q ss_conf 8999999998699899991679-------87789999999855-723321124454433446788998853100133321 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAIK-------VKDFVPLIKLCQDY-PSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVV 89 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~~-------~~~~~~~~~l~~~~-p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~ 89 (262) +...++...+.|+..++..|++ .++..+..+.+.+. ++.+-..+|+=- ....+..+.. +.+.+-.+- T Consensus 35 ~~~~i~~l~~~Gv~Gl~~~G~tGE~~~Ls~eEr~~l~~~~~~~~~~~~~vi~gv~~----~s~~~~i~~a-~~a~~~Gad 109 (301) T 1xky_A 35 TTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS----NNTHASIDLT-KKATEVGVD 109 (301) T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC----SCHHHHHHHH-HHHHHTTCS T ss_pred HHHHHHHHHHCCCCEEEECEECCHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECC----HHHHHHHHHH-HHHHHCCCC T ss_conf 99999999976999899786522065589999999999999860467876887273----6699999999-999975999 Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEC Q ss_conf 00446775533221110246789999876642044203300 Q gi|254780215|r 90 AIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHS 130 (262) Q Consensus 90 aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~ 130 (262) +| =+.-.||... + |.++....-++|...++|+++.- T Consensus 110 ~i-~v~pP~~~~~-~---~~~i~~~~~~i~~~~~~pi~lYn 145 (301) T 1xky_A 110 AV-MLVAPYYNKP-S---QEGMYQHFKAIAESTPLPVMLYN 145 (301) T ss_dssp EE-EEECCCSSCC-C---HHHHHHHHHHHHHTCSSCEEEEE T ss_pred EE-EECCCCCCCC-C---HHHHHHHHHHHHHCCCCCEEEEE T ss_conf 99-9789978998-9---99999999999851899789996 No 166 >3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MCSG, protein structure initiative; 1.20A {Agrobacterium tumefaciens str} Probab=23.64 E-value=33 Score=13.96 Aligned_cols=107 Identities=7% Similarity=-0.058 Sum_probs=49.8 Q ss_pred HHHHHHHHHHCCCCEEEEECCC-------HHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC Q ss_conf 8999999998699899991679-------87789999999855-723321124454433446788998853100133321 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAIK-------VKDFVPLIKLCQDY-PSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVV 89 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~~-------~~~~~~~~~l~~~~-p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~ 89 (262) +...++...+.|+..++..|++ .++..+..+.+.+. .+.+-...|+= .....+..+ +.+.+.+..+- T Consensus 26 l~~~i~~l~~~Gv~gi~~~G~tGE~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~----~~~t~~~i~-~a~~a~~~Gad 100 (294) T 3b4u_A 26 MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL----VDSIEDAAD-QSAEALNAGAR 100 (294) T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC----CSSHHHHHH-HHHHHHHTTCS T ss_pred HHHHHHHHHHCCCCEEEECEECCCHHHCCHHHHHHHHHHHHHHCCCCCCEEECCC----CCCHHHHHH-HHHHHHHCCCC T ss_conf 9999999997799999978125335358999999999885552157775353147----785999999-99999874997 Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEC Q ss_conf 00446775533221110246789999876642044203300 Q gi|254780215|r 90 AIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHS 130 (262) Q Consensus 90 aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~ 130 (262) || =+...+|....+.+...+.|+...+....-++|++++- T Consensus 101 ~i-lv~~P~~~~~~~~~~~~~~~~~i~~a~~~~~lpi~~yn 140 (294) T 3b4u_A 101 NI-LLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294) T ss_dssp EE-EECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE T ss_pred EE-EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCC T ss_conf 89-87068545785378999999999986247778641168 No 167 >3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A Probab=23.48 E-value=34 Score=13.94 Aligned_cols=25 Identities=12% Similarity=0.254 Sum_probs=15.3 Q ss_pred HHHHHHHHCCCCCEEECHHHHHHHH Q ss_conf 9987664204420330002333579 Q gi|254780215|r 114 RHIEASRITGIPLVIHSRSADDDMA 138 (262) Q Consensus 114 ~ql~lA~e~~~pv~iH~r~a~~~~l 138 (262) ..++-|.+.+.+|.|||..+-...- T Consensus 99 ~fI~~~~~~g~~VLVHC~~G~sRS~ 123 (176) T 3cm3_A 99 AFLSKCDQRNEPVLVHSAAGVNRSG 123 (176) T ss_dssp HHHHHHHHHTCCEEEECSSSSSHHH T ss_pred HHHHHHHHCCCEEEEECCCCCCHHH T ss_conf 9999998559989999998774149 No 168 >3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp} Probab=23.39 E-value=34 Score=13.93 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=30.1 Q ss_pred CCEEECHHHH--HHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCC-------CCEEECCCCCCHHH-HHHHHHHHHC Q ss_conf 2033000233--357999853100036753311214640234432103-------52020233221133-3223333210 Q gi|254780215|r 125 PLVIHSRSAD--DDMAAILQEEMKKGPFPFVIHCFSSSQKLADICLEL-------GGYISFTGMITFPK-YDALRAIARG 194 (262) Q Consensus 125 pv~iH~r~a~--~~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~-------g~y~S~~g~i~~~~-~~~~~e~v~~ 194 (262) -+.+|..... .++++.+++... ..+..++ -+-+.+.++.+++. +..-||+|.--.+. -++++++-+. T Consensus 112 ~I~~H~E~~~~~~~~i~~ik~~g~--k~Glaln-p~T~i~~l~~~l~~iD~VlvM~V~PGf~GQ~f~~~~l~kI~~l~~~ 188 (246) T 3inp_A 112 SIVFHPEASEHIDRSLQLIKSFGI--QAGLALN-PATGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKW 188 (246) T ss_dssp EEEECGGGCSCHHHHHHHHHTTTS--EEEEEEC-TTCCSGGGTTTGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHH T ss_pred EEEEECCCCCCHHHHHHHHHHCCC--EEEEEEC-CCCCHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 999842021089999999998198--1799963-7778999988764000356742169887611457799999999988 Q ss_pred CCC--CCEEEEECC Q ss_conf 566--717983078 Q gi|254780215|r 195 IPM--DRVLVETDS 206 (262) Q Consensus 195 iPl--driLlETDs 206 (262) +|. -.+.++-|+ T Consensus 189 ~~~~~~~~~I~VDG 202 (246) T 3inp_A 189 ISSTDRDILLEIDG 202 (246) T ss_dssp HHHHTSCCEEEEES T ss_pred HHCCCCCCEEEEEC T ss_conf 75247771599979 No 169 >1eg7_A Formyltetrahydrofolate synthetase; folate binding, ATP binding, formate binding, monovalent cation binding, ligase; 2.50A {Moorella thermoacetica} SCOP: c.37.1.10 PDB: 1fpm_A 1fp7_A Probab=23.12 E-value=34 Score=13.90 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=27.2 Q ss_pred HHHHHHHHHHHHHHCCCCCEEECH----HHHHHHHHHHHHHHHCCCCCCCCEEC Q ss_conf 467899998766420442033000----23335799985310003675331121 Q gi|254780215|r 108 QKVVFLRHIEASRITGIPLVIHSR----SADDDMAAILQEEMKKGPFPFVIHCF 157 (262) Q Consensus 108 Q~~vF~~ql~lA~e~~~pv~iH~r----~a~~~~l~iL~~~~~~~~~~~i~H~F 157 (262) -..-+++|++-.++|++|+++=-- |...| ++.+++++......+..||= T Consensus 359 G~~NL~rHIeNl~~fGvpvVVAIN~F~tDT~~E-i~~i~~~~~~~Gv~~a~~wa 411 (557) T 1eg7_A 359 GFANLEKHIENIGKFGVPAVVAINAFPTDTEAE-LNLLYELCAKAGAEVALSWA 411 (557) T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEECCTTCCHHH-HHHHHHHTTTSEEEEECCTT T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH-HHHHHHHHHHCCCEEEEECC T ss_conf 776699999755432897489843777677889-99999999865981764113 No 170 >1kid_A Groel (HSP60 class); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Escherichia coli} SCOP: c.8.5.1 PDB: 1fya_A 1fy9_A 1la1_A 1jon_A 1dk7_A 1dkd_A Probab=23.09 E-value=34 Score=13.89 Aligned_cols=42 Identities=24% Similarity=0.315 Sum_probs=30.8 Q ss_pred HHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 899998766420442033000233357999853100036753 Q gi|254780215|r 111 VFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPF 152 (262) Q Consensus 111 vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~ 152 (262) =+...|+.+.+.++|++|-+.+-.++++..|-....++..++ T Consensus 59 ~ilp~Le~~~~~~rPLlIIA~di~~eaL~~Lv~N~~kg~l~v 100 (203) T 1kid_A 59 EMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKV 100 (203) T ss_dssp HHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHHHTTSCCE T ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCE T ss_conf 889999999854996899954106889999998640587532 No 171 >2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A* Probab=23.04 E-value=34 Score=13.89 Aligned_cols=32 Identities=13% Similarity=0.093 Sum_probs=14.1 Q ss_pred HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC Q ss_conf 999998699899991679877899999998557 Q gi|254780215|r 22 IMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYP 54 (262) Q Consensus 22 i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p 54 (262) ++...+.|++.+++ +|+-.+......+.++++ T Consensus 79 ~~~L~~~~~~~IVI-ACNTasa~al~~lr~~~~ 110 (290) T 2vvt_A 79 ADFLLKKRIKMLVI-ACNTATAVALEEIKAALP 110 (290) T ss_dssp HHHHHTTTCSEEEE-CCHHHHHHHHHHHHHHCS T ss_pred HHHHHHCCCCEEEE-ECCHHHHHHHHHHHHCCC T ss_conf 99999739996999-445288999999975089 No 172 >1o0y_A Deoxyribose-phosphate aldolase; TM1559, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: c.1.10.1 Probab=22.75 E-value=35 Score=13.85 Aligned_cols=30 Identities=20% Similarity=0.253 Sum_probs=12.4 Q ss_pred ECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC Q ss_conf 167987789999999855723321124454433 Q gi|254780215|r 36 IAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHA 68 (262) Q Consensus 36 ~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~ 68 (262) +..+.++.....+.+.+|+ +.++=+.|.++ T Consensus 54 p~~T~~~i~~~c~~A~~~~---~~aVCV~P~~v 83 (260) T 1o0y_A 54 PFATPDDIKKLCLEARENR---FHGVCVNPCYV 83 (260) T ss_dssp TTCCHHHHHHHHHHHHHHT---CSEEEECGGGH T ss_pred CCCCHHHHHHHHHHHHHCC---CCEEEECHHHH T ss_conf 8899999999999985259---82899899999 No 173 >3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A Probab=22.57 E-value=35 Score=13.83 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=20.5 Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHH Q ss_conf 6789999876642044203300023 Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSA 133 (262) Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a 133 (262) ..-+.+...+|..+++||+.|+-.+ T Consensus 305 it~~~kIa~lA~a~gi~v~pH~~g~ 329 (455) T 3fxg_A 305 LTELLKVAALAAAYDVPVVPHASGP 329 (455) T ss_dssp HHHHHHHHHHHHTTTCCBCCCSCTH T ss_pred HHHHHHHHHHHHHCCCEEEEECCHH T ss_conf 9999999999998599699747289 No 174 >2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 Probab=22.37 E-value=35 Score=13.80 Aligned_cols=130 Identities=14% Similarity=0.087 Sum_probs=67.6 Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHH Q ss_conf 67899998766420442033000233357999853100036753311214640234432103520202332211333223 Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFPKYDAL 188 (262) Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~ 188 (262) .......+..|.++++++..|.-.... +...+.. ....+-|+............+.+..++............ T Consensus 215 ~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~-----g~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (418) T 2qs8_A 215 QEEVDAVVSAAKDYGMWVAVHAHGAEG-MKRAIKA-----GVDSIEHGTFMDLEAMDLMIENGTYYVPTISAGEFVAEK- 287 (418) T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHH-----TCSEEEECTTCCHHHHHHHHHHTCEEECCHHHHHHHHHH- T ss_pred HHHHHHHHHHHHHHCCCEEEECCCHHH-HHHHHHC-----CCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCHHHHHH- T ss_conf 567899999999819951453376178-9999984-----997898611331467788886195374043200133332- Q ss_pred HHHHHCCCC------------------------CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH Q ss_conf 333210566------------------------71798307866787776887588244999999999872899899999 Q gi|254780215|r 189 RAIARGIPM------------------------DRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLME 244 (262) Q Consensus 189 ~e~v~~iPl------------------------driLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~ 244 (262) .......|. ..+..-+|++.. .. ......+..+.+ .+++.+++.+ T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---------~~-~~~~~~~~~~~~-~gls~~eal~ 356 (418) T 2qs8_A 288 SKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGVQ---------KH-GTNWKEFVYMVE-NGMPAMKAIQ 356 (418) T ss_dssp TTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTTB---------CT-TCTTHHHHHHHH-TTCCHHHHHH T ss_pred HHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCC---------CC-HHHHHHHHHHHH-CCCCHHHHHH T ss_conf 210345512220211222432211267898648732125777656---------52-237999999998-5999999999 Q ss_pred HHHHHHHHHHHH Q ss_conf 999999998425 Q gi|254780215|r 245 ETTKNALKLFSK 256 (262) Q Consensus 245 ~~~~N~~~~f~~ 256 (262) ..+.|.-+.+|. T Consensus 357 ~~T~~pA~~lgl 368 (418) T 2qs8_A 357 SATMETAKLLRI 368 (418) T ss_dssp HTTHHHHHHTTC T ss_pred HHHHHHHHHHCC T ss_conf 999999999599 No 175 >1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* Probab=22.12 E-value=36 Score=13.77 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=54.9 Q ss_pred HHHHHHHHHHCCCCEEEEECC-------CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE Q ss_conf 899999999869989999167-------9877899999998557233211244544334467889988531001333210 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAI-------KVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVA 90 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~-------~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~a 90 (262) +...++...+.|+..++..|+ +.++..+..+.+.+....+.+.+| -. ...+..+ +.+...+-.+.+ T Consensus 22 ~~~~i~~l~~~Gv~gi~i~GttGE~~~Ls~~Er~~~~~~~~~~~~~~i~~v~--~~----s~~~~i~-~a~~a~~~Gad~ 94 (293) T 1w3i_A 22 LKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVG--GL----NLDDAIR-LAKLSKDFDIVG 94 (293) T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECC--CS----CHHHHHH-HHHHGGGSCCSE T ss_pred HHHHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECC--CC----CHHHHHH-HHHHHHHCCCCE T ss_conf 9999999998699989978345646658899999999998753541354125--56----6787788-877777449655 Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHH Q ss_conf 044677553322111024678999987664204420330002 Q gi|254780215|r 91 IGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRS 132 (262) Q Consensus 91 IGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~ 132 (262) + -+-..+++.. -.|..+++..-++|...++|++++... T Consensus 95 ~-~~~~P~~~~~---~~~~~l~~~~~~ia~a~~~pi~iYn~P 132 (293) T 1w3i_A 95 I-ASYAPYYYPR---MSEKHLVKYFKTLCEVSPHPVYLYNYP 132 (293) T ss_dssp E-EEECCCSCSS---CCHHHHHHHHHHHHHHCSSCEEEEECH T ss_pred E-ECCCCCCCCC---CCHHHHHHHHHHHHHHHCCEEEEECCC T ss_conf 5-0468700035---889999999999997225537887167 No 176 >2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis} Probab=22.10 E-value=36 Score=13.77 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=28.0 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 4999999999872899899999999999998425 Q gi|254780215|r 223 YVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 223 ~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) .+...++.+.+..+++.+++.+..+.|.-+++|. T Consensus 320 ~~~~~~~~~~~~~gls~~eal~~~T~~~A~~lgl 353 (396) T 2vhl_A 320 KMNEGARHMREFTNCSWTDIANITSENAAKQLGI 353 (396) T ss_dssp CHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHHTC T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC T ss_conf 4999999999974999999999999999999599 No 177 >1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A Probab=21.93 E-value=36 Score=13.74 Aligned_cols=20 Identities=25% Similarity=0.144 Sum_probs=11.3 Q ss_pred HHHHHHHCCCCCCEEEEECC Q ss_conf 23333210566717983078 Q gi|254780215|r 187 ALRAIARGIPMDRVLVETDS 206 (262) Q Consensus 187 ~~~e~v~~iPldriLlETDs 206 (262) ++.+.++.-...-|+.|+.. T Consensus 228 ~~~~~ik~~~i~~if~e~~~ 247 (291) T 1pq4_A 228 QLIDTAKENNLTMVFGETQF 247 (291) T ss_dssp HHHHHHHTTTCCEEEEETTS T ss_pred HHHHHHHHCCCCEEEECCCC T ss_conf 99999997499889972899 No 178 >3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405} Probab=21.88 E-value=36 Score=13.74 Aligned_cols=18 Identities=11% Similarity=0.119 Sum_probs=10.7 Q ss_pred HHHHHHHHCCCCEEEEEC Q ss_conf 999999986998999916 Q gi|254780215|r 20 DVIMRAHQANVLKMIAIA 37 (262) Q Consensus 20 ~~i~~a~~~gv~~~i~~~ 37 (262) .++++....+++++.... T Consensus 38 ~li~~L~~~~~D~i~vtd 55 (315) T 3ijd_A 38 KHIERISGLDIDGLVIYD 55 (315) T ss_dssp HHHHHHHTSCCSEEEECC T ss_pred HHHHHHCCCCCCEEEECC T ss_conf 999984305999899657 No 179 >1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8 Probab=21.68 E-value=36 Score=13.71 Aligned_cols=66 Identities=17% Similarity=0.170 Sum_probs=37.7 Q ss_pred HHHHHHHHCCCCCCCEECCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHCCCCCEEEC-HHHHHHHHHHHHH Q ss_conf 99885310013332100446775533221110--246789999876642044203300-0233357999853 Q gi|254780215|r 75 LVDELVCLASHPRVVAIGETGLDRYHNAHTIE--EQKVVFLRHIEASRITGIPLVIHS-RSADDDMAAILQE 143 (262) Q Consensus 75 ~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e--~Q~~vF~~ql~lA~e~~~pv~iH~-r~a~~~~l~iL~~ 143 (262) .++.+..++.+.++.+| =|||.+.-+.+.-+ .+.+.|.. +|+..+++||.... |-.-.++-+.|.+ T Consensus 43 ~~~~i~~ii~e~~i~~i-ViGlP~~~dg~~~~~~~~v~~f~~--~l~~~~~l~V~~~DEr~TS~~A~~~l~~ 111 (150) T 1vhx_A 43 GLSRLSELIKDYTIDKI-VLGFPKNMNGTVGPRGEASQTFAK--VLETTYNVPVVLWDERLTTMAAEKMLIA 111 (150) T ss_dssp CHHHHHHHHTTSEEEEE-EEECCCCBTTBCCHHHHHHHHHHH--HHHHHHCSCEEEECCSSCHHHHHHHHHH T ss_pred HHHHHHHHHHHHCCCEE-EEECCCCCCCCHHHHHHHHHHHHH--HHCCCCCCCEEEECCCCCHHHHHHHHHH T ss_conf 99999999998399969-985784668875488999999999--6265889756886788659999999997 No 180 >1xri_A AT1G05000; structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics, phosphoprotein phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A Probab=20.92 E-value=38 Score=13.61 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=12.6 Q ss_pred HHHHHCCCCCEEECHHHHHH Q ss_conf 76642044203300023335 Q gi|254780215|r 117 EASRITGIPLVIHSRSADDD 136 (262) Q Consensus 117 ~lA~e~~~pv~iH~r~a~~~ 136 (262) .+..+.+.||.+||..+-+. T Consensus 86 ~~~~~~~~pvlvHC~aGkdR 105 (151) T 1xri_A 86 VLLDEKNHPVLIHCKRGKHR 105 (151) T ss_dssp HHHCGGGCSEEEECSSSSSH T ss_pred HHHHCCCCCEEEECCCCCHH T ss_conf 99714688889886998408 No 181 >2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium LT2} Probab=20.89 E-value=38 Score=13.60 Aligned_cols=17 Identities=12% Similarity=0.305 Sum_probs=10.3 Q ss_pred HHHHHHHHHHHHHHHHH Q ss_conf 99999999999842568 Q gi|254780215|r 242 LMEETTKNALKLFSKIS 258 (262) Q Consensus 242 i~~~~~~N~~~~f~~~~ 258 (262) +...=|+|+++++..+. T Consensus 329 I~~~Ry~sY~~l~~el~ 345 (358) T 2rcn_A 329 IAETRFENYHRILESMA 345 (358) T ss_dssp SCHHHHHHHHHHHHHHC T ss_pred CCHHHHHHHHHHHHHHH T ss_conf 88999999999999999 No 182 >2q02_A Putative cytoplasmic protein; NP_463296.1, structural genomics, joint center for structural genomics, JCSG; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4 Probab=20.74 E-value=38 Score=13.58 Aligned_cols=133 Identities=12% Similarity=0.042 Sum_probs=71.8 Q ss_pred CCHHHHHHHHHHCCCCEEEEEC-------CCHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHCC--- Q ss_conf 2689999999986998999916-------798778999999985572332112445443-34467889988531001--- Q gi|254780215|r 16 EDRHDVIMRAHQANVLKMIAIA-------IKVKDFVPLIKLCQDYPSSIFCSVGTHPCH-AHEENEVLVDELVCLAS--- 84 (262) Q Consensus 16 ~d~~~~i~~a~~~gv~~~i~~~-------~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~-~~~~~~~~~~~l~~l~~--- 84 (262) -++++.++.+.+.|...+=..+ .+-.+..++.++.+++.-.+ .++++.. ..+..+...+.+++.+. T Consensus 19 l~l~e~i~~a~e~Gfd~IEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i---~~l~~~~~~~~~~~~~~~~~~~~i~~A~ 95 (272) T 2q02_A 19 LSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI---VTINAVYPFNQLTEEVVKKTEGLLRDAQ 95 (272) T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE---EEEEEETTTTSCCHHHHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCE---EEECCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 8999999999981999899824666533347660999999999859947---8833654667755899999999999999 Q ss_pred ---CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEC-------HHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf ---3332100446775533221110246789999876642044203300-------023335799985310003675331 Q gi|254780215|r 85 ---HPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHS-------RSADDDMAAILQEEMKKGPFPFVI 154 (262) Q Consensus 85 ---~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~-------r~a~~~~l~iL~~~~~~~~~~~i~ 154 (262) .+.++.++ | ........+...+.+++-.++|.+++..+.++. .....+++++++.. . .+.++++ T Consensus 96 ~lG~~~i~~~~--~--~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~~E~~~~~~~~~~~~~~a~~li~~~-~-~~~~l~~ 169 (272) T 2q02_A 96 GVGARALVLCP--L--NDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREA-G-SPFKVLL 169 (272) T ss_dssp HHTCSEEEECC--C--CSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHH-T-CCCEEEE T ss_pred HCCCCEEEEEC--C--CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCHHHHHHHHHHC-C-CCEEEEE T ss_conf 80999799927--9--987610399999999999988612697799998988764005899999999970-9-8658984 Q ss_pred ---EEC Q ss_conf ---121 Q gi|254780215|r 155 ---HCF 157 (262) Q Consensus 155 ---H~F 157 (262) |++ T Consensus 170 D~~h~~ 175 (272) T 2q02_A 170 DTFHHH 175 (272) T ss_dssp EHHHHH T ss_pred ECCHHH T ss_conf 052133 No 183 >2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str} Probab=20.67 E-value=38 Score=13.57 Aligned_cols=102 Identities=12% Similarity=0.150 Sum_probs=54.7 Q ss_pred HCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCC Q ss_conf 22689999999986998999916798778999999985572332112445443344678899885310013332100446 Q gi|254780215|r 15 DEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVAIGET 94 (262) Q Consensus 15 ~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~aIGEi 94 (262) .+++.+.+.+..++| ..++-+++... ...+..+.+.. .....+.=+.|-...... +.+ =|- T Consensus 22 wd~la~~~~~q~~~G-a~IIEVnvG~~-~~va~~l~k~~-~~~v~~~Di~P~~ids~~-------------dDv---~ep 82 (153) T 2k4m_A 22 WNDLAVYIIRCSGPG-TRVVEVGAGRF-LYVSDYIRKHS-KVDLVLTDIKPSHGGIVR-------------DDI---TSP 82 (153) T ss_dssp HHHHHHHHHHHSCSS-SEEEEETCTTC-CHHHHHHHHHS-CCEEEEECSSCSSTTEEC-------------CCS---SSC T ss_pred HHHHHHHHHHHCCCC-CEEEEECCCCC-CCHHHHHHHHH-CCEEEEECCCCCCCCCCC-------------CHH---CCC T ss_conf 999999999826899-86899748986-20699999970-966999507855567764-------------010---171 Q ss_pred CCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCEEECHHHHH Q ss_conf 775533221---11024678999987664204420330002333 Q gi|254780215|r 95 GLDRYHNAH---TIEEQKVVFLRHIEASRITGIPLVIHSRSADD 135 (262) Q Consensus 95 GLD~~~~~~---~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~ 135 (262) ||..|.+.. +...-.+.|+.++.||++++-++++=+-+.++ T Consensus 83 ~L~iY~G~~lInSI~~~~E~~~~il~LakkyGA~vIil~ld~eg 126 (153) T 2k4m_A 83 RMEIYRGAALIYSIRPPAEIHSSLMRVADAVGARLIIKPLTGED 126 (153) T ss_dssp CHHHHTTEEEEEEESCCTTTHHHHHHHHHHHTCEEEEECBTTBC T ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCC T ss_conf 34763697846633898788899999999849939999548888 No 184 >3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Probab=20.58 E-value=37 Score=13.69 Aligned_cols=17 Identities=6% Similarity=0.135 Sum_probs=9.0 Q ss_pred HHHHHCCCCEEEEECCC Q ss_conf 99998699899991679 Q gi|254780215|r 23 MRAHQANVLKMIAIAIK 39 (262) Q Consensus 23 ~~a~~~gv~~~i~~~~~ 39 (262) +..++.||..++....+ T Consensus 33 ~~L~~~gI~~VInL~~~ 49 (294) T 3nme_A 33 DKLRKIGVKTIFCLQQD 49 (294) T ss_dssp HHHHHTTEEEEEECCCH T ss_pred HHHHHCCCCEEEECCCC T ss_conf 99998899899988777 No 185 >2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus HB8} Probab=20.58 E-value=38 Score=13.56 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=25.2 Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 999999999872899899999999999998425 Q gi|254780215|r 224 VVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 224 i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) .......+..-.+++.+++.+.++.|.-+.||. T Consensus 333 ~~~~~~~~~~~~g~s~~~al~~~T~n~A~~lgl 365 (426) T 2z00_A 333 FPLLYTELHLKRGFPLQRLVELFTDGPRRVLGL 365 (426) T ss_dssp HHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTC T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 889999998638999999999999999998199 No 186 >1yny_A D-hydantoinase, dhpase; TIM-barrel, binuclear metal-binding, hydrolase; 2.30A {Bacillus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1k1d_A* Probab=20.43 E-value=39 Score=13.54 Aligned_cols=33 Identities=15% Similarity=0.237 Sum_probs=24.4 Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 999999999872899899999999999998425 Q gi|254780215|r 224 VVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262) Q Consensus 224 i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262) ..........-.+++.++..+..+.|.-+.||. T Consensus 346 ~~~~~~~~~~~~~~~l~~al~~~T~~~A~~lgl 378 (461) T 1yny_A 346 LTILYSEGVRQGRISLNQFVDISSTKAAKLFGM 378 (461) T ss_dssp HHHHHHHTTTTTSSCHHHHHHHHTHHHHHHTTC T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC T ss_conf 788887787505999999999999889998298 No 187 >3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae} Probab=20.32 E-value=39 Score=13.53 Aligned_cols=48 Identities=4% Similarity=0.096 Sum_probs=22.3 Q ss_pred CCHHHHHHHHCCCC--EEECCCC--CCHHHHHHHHHHHHCCCCCCEEEEECC Q ss_conf 64023443210352--0202332--211333223333210566717983078 Q gi|254780215|r 159 SSQKLADICLELGG--YISFTGM--ITFPKYDALRAIARGIPMDRVLVETDS 206 (262) Q Consensus 159 G~~~~~~~~l~~g~--y~S~~g~--i~~~~~~~~~e~v~~iPldriLlETDs 206 (262) .......+...+.. .++.++- .+-+.-.++.+.++.-...-|+.|+-. T Consensus 185 ~a~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~ 236 (284) T 3cx3_A 185 TAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNA 236 (284) T ss_dssp SCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSS T ss_pred CHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC T ss_conf 1279999987994444111256554228899999999985599789981899 No 188 >3noe_A DAP-A, dihydrodipicolinate synthase; Lys biosynthesis pathway, lyase; 2.95A {Pseudomonas aeruginosa} Probab=20.28 E-value=39 Score=13.52 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=53.5 Q ss_pred HHHHHHHHHHCCCCEEEEECC-------CHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC Q ss_conf 899999999869989999167-------98778999999985-5723321124454433446788998853100133321 Q gi|254780215|r 18 RHDVIMRAHQANVLKMIAIAI-------KVKDFVPLIKLCQD-YPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVV 89 (262) Q Consensus 18 ~~~~i~~a~~~gv~~~i~~~~-------~~~~~~~~~~l~~~-~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~ 89 (262) ....++...+.|+..+...|+ +.++.....+.+.+ -.+.+..-+|+-. ......-++.+.+.+-.+- T Consensus 24 ~~~~i~~li~~Gv~gi~i~G~tGE~~~Ls~~Er~~l~~~~~~~~~g~~~vi~gv~~-----~s~~~~i~~a~~a~~~Gad 98 (292) T 3noe_A 24 LAKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRRVVDQVKGRIPVIAGTGA-----NSTREAVALTEAAKSGGAD 98 (292) T ss_dssp HHHHHHHHHHHTCSEEEESSTTTTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-----SSHHHHHHHHHHHHTTTCS T ss_pred HHHHHHHHHHCCCCEEEECEECCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCC-----CCHHHHHHHHHHHHHCCCC T ss_conf 99999999985999899885752266699999999999999972588868985587-----5599999999999984999 Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECH Q ss_conf 004467755332211102467899998766420442033000 Q gi|254780215|r 90 AIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSR 131 (262) Q Consensus 90 aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r 131 (262) |+ =+--.||... .|.++....-++|...++|+++... T Consensus 99 ~v-~v~~P~~~~~----~~~~i~~~~~~ia~~~~~pi~~Y~~ 135 (292) T 3noe_A 99 AC-LLVTPYYNKP----TQEGMYQHFRHIAEAVAIPQILYNV 135 (292) T ss_dssp EE-EEECCCSSCC----CHHHHHHHHHHHHHHSCSCEEEEEC T ss_pred EE-EECCCCCCCC----CHHHHHHHHHHHHHHCCCCEEEEEC T ss_conf 99-9889988998----9999999999999747998899979 Done!