RPSBLAST alignment of GI: 254780215 and protein with PDBid: 1j6o

>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12 Length = 268

 Score =  226 bits (576), Expect = 5e-60
 Identities = 90/258 (34%), Positives = 143/258 (55%), Gaps = 2/258 (0%)

Query: 2   LIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSV 61
           ++DTH HL    FD+DR+ VI    + N+  ++ + + ++D    + L +     IFCSV
Sbjct: 13  MVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGVNLEDSKKSLDLSKTSDR-IFCSV 71

Query: 62  GTHPCHAHEENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRI 121
           G HP  A E  E  ++ L   A   +VVAIGETGLD + N    E QK VF+  IE +  
Sbjct: 72  GVHPHDAKEVPEDFIEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGK 131

Query: 122 TGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMIT 181
             +PLV+H R A  +   IL+ E        VIH FSS  + A   ++LG  +   G +T
Sbjct: 132 LNLPLVVHIRDAYSEAYEILRTE-SLPEKRGVIHAFSSDYEWAKKFIDLGFLLGIGGPVT 190

Query: 182 FPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYED 241
           +PK +ALR + + + ++ +++ETD P++ P   +GKRNEP Y+    + +++   V    
Sbjct: 191 YPKNEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQVLGVPEAK 250

Query: 242 LMEETTKNALKLFSKISE 259
           + E TT+NA ++F ++ E
Sbjct: 251 VDEATTENARRIFLEVKE 268