HHsearch alignment for GI: 254780217 and conserved domain: CHL00176

>CHL00176 ftsH cell division protein; Validated.
Probab=99.02  E-value=8.7e-09  Score=90.38  Aligned_cols=185  Identities=15%  Similarity=0.203  Sum_probs=121.1

Q ss_pred             CCHHHHCCHHHHHHHHHHHHH-----------CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCC
Q ss_conf             756561092999999999998-----------288981663117989888999999999981779988643121012678
Q gi|254780217|r    9 VYNQRLFGHEDIEKFLSQYYC-----------SGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPC   77 (347)
Q Consensus         9 ~~~~~i~G~~~~~~~L~~~~~-----------~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~   77 (347)
T Consensus       174 vtF~DVaG~~eaK~el~EivdfLk~P~k~~~~Gak~PkGvLL~GpPGTGKTlLAkAvAgE-------a~vpF~~~sg---  243 (631)
T CHL00176        174 ITFNDVAGVEEAKEELEEVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE-------AEVPFFSISG---  243 (631)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCC-------CCCCEEEEEH---
T ss_conf             775322885899999999999835958876449968965898898998788999998565-------5884699883---


Q ss_pred             CHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC--------------
Q ss_conf             867999967898754530010001013421232378875544310222111121035322055424--------------
Q gi|254780217|r   78 SPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMN--------------  143 (347)
Q Consensus        78 ~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln--------------  143 (347)
T Consensus       244 ----------s--~F~e~~v-----------Gvga~rVR~LF~~Ar~~----aP~IiFIDEiDaig~~Rg~~~~gg~~e~  296 (631)
T CHL00176        244 ----------S--EFVEMFV-----------GVGAARVRDLFKKAKEN----SPCIVFIDEIDAVGRQRGAGVGGGNDER  296 (631)
T ss_pred             ----------H--HHHHHHC-----------CHHHHHHHHHHHHHHHC----CCEEEEEEEEEEEEECCCCCCCCCCCHH
T ss_conf             ----------7--8556421-----------55589999999999863----9969998710120114789888985089


Q ss_pred             HHHHHHHHHHHH--HCCCCCCEEEEECCCCCCCHHHHC--EE-EEEECCCCCHHHHHHHHHHHCCC---CCHHHHHHHHH
Q ss_conf             000145677766--303434167650443357302520--36-98864799989999999972788---89678999999
Q gi|254780217|r  144 RNAANALLKSLE--EPPQKVLFILISHASPTILSTIRS--RC-LSIKFNSLSENNLYKALEQLKIM---GWDSKRDFVKI  215 (347)
Q Consensus       144 ~~AaNALLK~LE--EPp~~t~fiLit~~~~~il~TI~S--Rc-~~i~f~~l~~~~~~~~L~~~~~~---~~~~~~~~~~~  215 (347)
T Consensus       297 e~tlnqLL~emDGf~~~~gViViaATNrpd~LDpALlRPGRFDR~I~V~lPD~~gR~~IL~vh~k~~~l~~dvdl~~iA~  376 (631)
T CHL00176        297 EQTLNQLLTEMDGFEGNKGVIVIAATNRIDILDAALLRPGRFDRQVTVSLPDFEGRLDILKVHARNKKLAEDVSLELIAR  376 (631)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf             99999999984288878886999825885545686626887754998269898999999999970786665300999986


Q ss_pred             HCCCCHHHHH-HHHCC
Q ss_conf             7598978999-88145
Q gi|254780217|r  216 AAYGSVARAI-KILHY  230 (347)
Q Consensus       216 ~s~Gs~~~A~-~ll~~  230 (347)
T Consensus       377 ~T~GfSGAdLanlvNE  392 (631)
T CHL00176        377 RTPGFSGADLANLLNE  392 (631)
T ss_pred             HCCCCCHHHHHHHHHH
T ss_conf             2699867888769999