HHsearch alignment for GI: 254780217 and conserved domain: CHL00176
>CHL00176 ftsH cell division protein; Validated.
Probab=99.02 E-value=8.7e-09 Score=90.38 Aligned_cols=185 Identities=15% Similarity=0.203 Sum_probs=121.1
Q ss_pred CCHHHHCCHHHHHHHHHHHHH-----------CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCC
Q ss_conf 756561092999999999998-----------288981663117989888999999999981779988643121012678
Q gi|254780217|r 9 VYNQRLFGHEDIEKFLSQYYC-----------SGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPC 77 (347)
Q Consensus 9 ~~~~~i~G~~~~~~~L~~~~~-----------~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~ 77 (347)
T Consensus 174 vtF~DVaG~~eaK~el~EivdfLk~P~k~~~~Gak~PkGvLL~GpPGTGKTlLAkAvAgE-------a~vpF~~~sg--- 243 (631)
T CHL00176 174 ITFNDVAGVEEAKEELEEVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGE-------AEVPFFSISG--- 243 (631)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCC-------CCCCEEEEEH---
T ss_conf 775322885899999999999835958876449968965898898998788999998565-------5884699883---
Q ss_pred CHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC--------------
Q ss_conf 867999967898754530010001013421232378875544310222111121035322055424--------------
Q gi|254780217|r 78 SPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMN-------------- 143 (347)
Q Consensus 78 ~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln-------------- 143 (347)
T Consensus 244 ----------s--~F~e~~v-----------Gvga~rVR~LF~~Ar~~----aP~IiFIDEiDaig~~Rg~~~~gg~~e~ 296 (631)
T CHL00176 244 ----------S--EFVEMFV-----------GVGAARVRDLFKKAKEN----SPCIVFIDEIDAVGRQRGAGVGGGNDER 296 (631)
T ss_pred ----------H--HHHHHHC-----------CHHHHHHHHHHHHHHHC----CCEEEEEEEEEEEEECCCCCCCCCCCHH
T ss_conf ----------7--8556421-----------55589999999999863----9969998710120114789888985089
Q ss_pred HHHHHHHHHHHH--HCCCCCCEEEEECCCCCCCHHHHC--EE-EEEECCCCCHHHHHHHHHHHCCC---CCHHHHHHHHH
Q ss_conf 000145677766--303434167650443357302520--36-98864799989999999972788---89678999999
Q gi|254780217|r 144 RNAANALLKSLE--EPPQKVLFILISHASPTILSTIRS--RC-LSIKFNSLSENNLYKALEQLKIM---GWDSKRDFVKI 215 (347)
Q Consensus 144 ~~AaNALLK~LE--EPp~~t~fiLit~~~~~il~TI~S--Rc-~~i~f~~l~~~~~~~~L~~~~~~---~~~~~~~~~~~ 215 (347)
T Consensus 297 e~tlnqLL~emDGf~~~~gViViaATNrpd~LDpALlRPGRFDR~I~V~lPD~~gR~~IL~vh~k~~~l~~dvdl~~iA~ 376 (631)
T CHL00176 297 EQTLNQLLTEMDGFEGNKGVIVIAATNRIDILDAALLRPGRFDRQVTVSLPDFEGRLDILKVHARNKKLAEDVSLELIAR 376 (631)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99999999984288878886999825885545686626887754998269898999999999970786665300999986
Q ss_pred HCCCCHHHHH-HHHCC
Q ss_conf 7598978999-88145
Q gi|254780217|r 216 AAYGSVARAI-KILHY 230 (347)
Q Consensus 216 ~s~Gs~~~A~-~ll~~ 230 (347)
T Consensus 377 ~T~GfSGAdLanlvNE 392 (631)
T CHL00176 377 RTPGFSGADLANLLNE 392 (631)
T ss_pred HCCCCCHHHHHHHHHH
T ss_conf 2699867888769999