HHsearch alignment for GI: 254780217 and conserved domain: CHL00181

>CHL00181 cbbX CbbX; Provisional.
Probab=98.99  E-value=7.8e-09  Score=90.79  Aligned_cols=155  Identities=16%  Similarity=0.213  Sum_probs=98.3

Q ss_pred             HH-HHCCHHHHHHHHHH---HHHCCC-----------C-CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCC
Q ss_conf             65-61092999999999---998288-----------9-81663117989888999999999981779988643121012
Q gi|254780217|r   11 NQ-RLFGHEDIEKFLSQ---YYCSGR-----------M-HHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNP   74 (347)
Q Consensus        11 ~~-~i~G~~~~~~~L~~---~~~~~~-----------l-~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~   74 (347)
T Consensus        21 Ld~eliGL~~VK~~v~~l~~~~~~~~~R~~~Gl~~~~~s~h-~vF~GnPGTGKTTVARl~a~il~~l--------G~L--   89 (287)
T CHL00181         21 LDEELIGLVPVKTRIREIAALLLVDRLRKNLGLVSSSPGLH-MSFTGSPGTGKTTVALKMADILYRL--------GYI--   89 (287)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHC--------CCC--
T ss_conf             98864696999999999999999999999879998887653-8887899867999999999999986--------995--


Q ss_pred             CCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC---------HH
Q ss_conf             678867999967898754530010001013421232378875544310222111121035322055424---------00
Q gi|254780217|r   75 DPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMN---------RN  145 (347)
Q Consensus        75 ~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln---------~~  145 (347)
T Consensus        90 -------------~~g~vve~~r~dLvg~yvG~T---a~kt~~~i~~-----a~GG--VLfIDEAY~L~~~~~~~dfg~e  146 (287)
T CHL00181         90 -------------KKGHLITVTRDDLVGQYIGHT---APKTKEVLKK-----AMGG--VLFIDEAYYLYKPDNERDYGAE  146 (287)
T ss_pred             -------------CCCEEEEECHHHHCCCCCCCC---HHHHHHHHHH-----CCCC--EEEEECHHHHCCCCCCCCCHHH
T ss_conf             -------------589589953588416353521---6999999996-----4598--7998244653578899983799


Q ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCC---CCC---HHHHCEEE-EEECCCCCHHHHHHHHHH
Q ss_conf             01456777663034341676504433---573---02520369-886479998999999997
Q gi|254780217|r  146 AANALLKSLEEPPQKVLFILISHASP---TIL---STIRSRCL-SIKFNSLSENNLYKALEQ  200 (347)
Q Consensus       146 AaNALLK~LEEPp~~t~fiLit~~~~---~il---~TI~SRc~-~i~f~~l~~~~~~~~L~~  200 (347)
T Consensus       147 aidtLl~~me~~~~~lvvI~AG-Y~~eM~~fl~~NpGL~sRf~~~i~F~dYt~~EL~~I~~~  207 (287)
T CHL00181        147 AIEILLQVMENQRDDLVVIFAG-YKDRMDKFYESNPGLSSRVANHVDFPDYTPEELLQIAKM  207 (287)
T ss_pred             HHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHHCCCHHHHCCCEEECCCCCHHHHHHHHHH
T ss_conf             9999999987079988999846-789999999859047876887237798599999999999