HHsearch alignment for GI: 254780217 and conserved domain: CHL00181
>CHL00181 cbbX CbbX; Provisional.
Probab=98.99 E-value=7.8e-09 Score=90.79 Aligned_cols=155 Identities=16% Similarity=0.213 Sum_probs=98.3
Q ss_pred HH-HHCCHHHHHHHHHH---HHHCCC-----------C-CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCC
Q ss_conf 65-61092999999999---998288-----------9-81663117989888999999999981779988643121012
Q gi|254780217|r 11 NQ-RLFGHEDIEKFLSQ---YYCSGR-----------M-HHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNP 74 (347)
Q Consensus 11 ~~-~i~G~~~~~~~L~~---~~~~~~-----------l-~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~ 74 (347)
T Consensus 21 Ld~eliGL~~VK~~v~~l~~~~~~~~~R~~~Gl~~~~~s~h-~vF~GnPGTGKTTVARl~a~il~~l--------G~L-- 89 (287)
T CHL00181 21 LDEELIGLVPVKTRIREIAALLLVDRLRKNLGLVSSSPGLH-MSFTGSPGTGKTTVALKMADILYRL--------GYI-- 89 (287)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHC--------CCC--
T ss_conf 98864696999999999999999999999879998887653-8887899867999999999999986--------995--
Q ss_pred CCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC---------HH
Q ss_conf 678867999967898754530010001013421232378875544310222111121035322055424---------00
Q gi|254780217|r 75 DPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMN---------RN 145 (347)
Q Consensus 75 ~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln---------~~ 145 (347)
T Consensus 90 -------------~~g~vve~~r~dLvg~yvG~T---a~kt~~~i~~-----a~GG--VLfIDEAY~L~~~~~~~dfg~e 146 (287)
T CHL00181 90 -------------KKGHLITVTRDDLVGQYIGHT---APKTKEVLKK-----AMGG--VLFIDEAYYLYKPDNERDYGAE 146 (287)
T ss_pred -------------CCCEEEEECHHHHCCCCCCCC---HHHHHHHHHH-----CCCC--EEEEECHHHHCCCCCCCCCHHH
T ss_conf -------------589589953588416353521---6999999996-----4598--7998244653578899983799
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCC---CCC---HHHHCEEE-EEECCCCCHHHHHHHHHH
Q ss_conf 01456777663034341676504433---573---02520369-886479998999999997
Q gi|254780217|r 146 AANALLKSLEEPPQKVLFILISHASP---TIL---STIRSRCL-SIKFNSLSENNLYKALEQ 200 (347)
Q Consensus 146 AaNALLK~LEEPp~~t~fiLit~~~~---~il---~TI~SRc~-~i~f~~l~~~~~~~~L~~ 200 (347)
T Consensus 147 aidtLl~~me~~~~~lvvI~AG-Y~~eM~~fl~~NpGL~sRf~~~i~F~dYt~~EL~~I~~~ 207 (287)
T CHL00181 147 AIEILLQVMENQRDDLVVIFAG-YKDRMDKFYESNPGLSSRVANHVDFPDYTPEELLQIAKM 207 (287)
T ss_pred HHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHHCCCHHHHCCCEEECCCCCHHHHHHHHHH
T ss_conf 9999999987079988999846-789999999859047876887237798599999999999