HHsearch alignment for GI: 254780217 and conserved domain: COG0305
>COG0305 DnaB Replicative DNA helicase [DNA replication, recombination, and repair].
Probab=90.79 E-value=0.64 Score=27.06 Aligned_cols=127 Identities=16% Similarity=0.188 Sum_probs=65.0
Q ss_pred HCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEE
Q ss_conf 10929999999999982889816631179898889999999999817799886431210126788679999678987545
Q gi|254780217|r 14 LFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFL 93 (347)
Q Consensus 14 i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~ 93 (347)
T Consensus 176 ~~Gi~tgf~~LD~~t~G~~~~dLiilAaRP~mGKTafalnia~n~a~~-------------------------~~~~-v~ 229 (435)
T COG0305 176 LIGVPTGFTDLDEITSGFRPGDLIIVAARPGMGKTALALNIALNAAAD-------------------------GRKP-VA 229 (435)
T ss_pred CCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH-------------------------CCCC-EE
T ss_conf 851446834567773377467779971689997589999999999985-------------------------5897-59
Q ss_pred EECCCCHHHCCCCCCCCCHHHHHH-HHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 300100010134212323788755-4431022211112103532205542400014567776630343416765044335
Q gi|254780217|r 94 YLSYSLNPKTGKWRTVITVDEIRR-IRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILISHASPT 172 (347)
Q Consensus 94 ~i~~~~~~k~~~~~~~I~vd~IR~-l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit~~~~~ 172 (347)
T Consensus 230 iFSL-----------EM~~eql~~R~L---s~~s~v~~~kirt----g~l~~~d~~~l~~a~~~l~~~~--i~IdD~~~~ 289 (435)
T COG0305 230 IFSL-----------EMSEEQLVMRLL---SSESGIESSKLRT----GRLSDDEWERLIKAASELSEAP--IFIDDTPGL 289 (435)
T ss_pred EEEC-----------CCCHHHHHHHHH---CCCCCCCHHCCCC----CCCCHHHHHHHHHHHHHHHHCC--EEECCCCCC
T ss_conf 9982-----------679999999753---4011545100212----5426899999999999876178--543378888
Q ss_pred CCHHHHCEEEEEEC
Q ss_conf 73025203698864
Q gi|254780217|r 173 ILSTIRSRCLSIKF 186 (347)
Q Consensus 173 il~TI~SRc~~i~f 186 (347)
T Consensus 290 si~eir~~aRrlk~ 303 (435)
T COG0305 290 TITEIRSKARRLKL 303 (435)
T ss_pred CHHHHHHHHHHHHH
T ss_conf 78889999998887