HHsearch alignment for GI: 254780217 and conserved domain: COG0465

>COG0465 HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones].
Probab=97.89  E-value=0.00043  Score=52.62  Aligned_cols=184  Identities=18%  Similarity=0.201  Sum_probs=103.8

Q ss_pred             CCHHHHCCHHHHHHHHHHHHH-----------CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCC
Q ss_conf             756561092999999999998-----------288981663117989888999999999981779988643121012678
Q gi|254780217|r    9 VYNQRLFGHEDIEKFLSQYYC-----------SGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPC   77 (347)
Q Consensus         9 ~~~~~i~G~~~~~~~L~~~~~-----------~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~   77 (347)
T Consensus       147 v~F~DVAG~dEakeel~EiVdfLk~p~ky~~lGakiPkGvlLvGpPGTGKTLLAkAvAgE-------A~VPFf~i-----  214 (596)
T COG0465         147 VTFADVAGVDEAKEELSELVDFLKNPKKYQALGAKIPKGVLLVGPPGTGKTLLAKAVAGE-------AGVPFFSI-----  214 (596)
T ss_pred             CCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHCC-------CCCCCEEC-----
T ss_conf             675664186799999999999863855667523534565268559998727899998454-------68983530-----


Q ss_pred             CHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCH-------------
Q ss_conf             8679999678987545300100010134212323788755443102221111210353220554240-------------
Q gi|254780217|r   78 SPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNR-------------  144 (347)
Q Consensus        78 ~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~-------------  144 (347)
T Consensus       215 ----------SGS~FVemfVG-----------vGAsRVRdLF~qAkk~----aP~IIFIDEiDAvGr~Rg~g~Gggnder  269 (596)
T COG0465         215 ----------SGSDFVEMFVG-----------VGASRVRDLFEQAKKN----APCIIFIDEIDAVGRQRGAGLGGGNDER  269 (596)
T ss_pred             ----------CCHHHHHHHCC-----------CCCHHHHHHHHHHHCC----CCCEEEEEHHHHCCCCCCCCCCCCCHHH
T ss_conf             ----------34446443147-----------8838889999985515----9966987634331454577889980699


Q ss_pred             -HHHHHHHHHHHHCCCCC-CEEEEECCCCCCCHHHHCEE----EEEECCCCCHHHHHHHHHH---HCCCCCHHHHHHHHH
Q ss_conf             -00145677766303434-16765044335730252036----9886479998999999997---278889678999999
Q gi|254780217|r  145 -NAANALLKSLEEPPQKV-LFILISHASPTILSTIRSRC----LSIKFNSLSENNLYKALEQ---LKIMGWDSKRDFVKI  215 (347)
Q Consensus       145 -~AaNALLK~LEEPp~~t-~fiLit~~~~~il~TI~SRc----~~i~f~~l~~~~~~~~L~~---~~~~~~~~~~~~~~~  215 (347)
T Consensus       270 EQTLNQlLvEmDGF~~~~gviviaaTNRpdVlD~ALlRpgRFDRqI~V~~PDi~gRe~IlkvH~~~~~l~~~V~l~~iAr  349 (596)
T COG0465         270 EQTLNQLLVEMDGFGGNEGVIVIAATNRPDVLDPALLRPGRFDRQILVELPDIKGREQILKVHAKNKPLAEDVDLKKIAR  349 (596)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf             99998888520157888754885267874333176528877662554478515657888788641577776678889864


Q ss_pred             HCCCCHHH-HHHHHC
Q ss_conf             75989789-998814
Q gi|254780217|r  216 AAYGSVAR-AIKILH  229 (347)
Q Consensus       216 ~s~Gs~~~-A~~ll~  229 (347)
T Consensus       350 ~tpGfsGAdL~nl~N  364 (596)
T COG0465         350 GTPGFSGADLANLLN  364 (596)
T ss_pred             HCCCCCCCHHHHHHH
T ss_conf             377856306765566