HHsearch alignment for GI: 254780217 and conserved domain: COG2842

>COG2842 Uncharacterized ATPase, putative transposase [General function prediction only].
Probab=93.32  E-value=0.59  Score=27.36  Aligned_cols=129  Identities=15%  Similarity=0.144  Sum_probs=67.6

Q ss_pred             CCCHHHHCCHHHH---HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHH
Q ss_conf             8756561092999---9999999982889816631179898889999999999817799886431210126788679999
Q gi|254780217|r    8 PVYNQRLFGHEDI---EKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQM   84 (347)
Q Consensus         8 p~~~~~i~G~~~~---~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i   84 (347)
T Consensus        68 ~~~~~~~l~tkt~r~~~~~~~~A~k~g~---l~~vyg~~g~gKt~a~~~y~~s~p~~~l~~~~p~~~a~-----~~i~~i  139 (297)
T COG2842          68 EKLAPDFLETKTVRRIFFRTRPASKTGS---LVVVYGYAGLGKTQAAKNYAPSNPNALLIEADPSYTAL-----VLILII  139 (297)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHCCC---EEEEECCCCCHHHHHHHHHCCCCCCCEEECCCHHHHHH-----HHHHHH
T ss_conf             5466432035024767542055551685---47886332200689998653358641361588136788-----999999


Q ss_pred             HCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             67898754530010001013421232378875544310222111121035322055424000145677766303434167
Q gi|254780217|r   85 ASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFI  164 (347)
Q Consensus        85 ~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fi  164 (347)
T Consensus       140 ~--------------~~~~~-----~~~~~~~d~~~~~~~~-l~~~~~~iivDEA~~L~~~ale~lr~i~d~~G--i~~v  197 (297)
T COG2842         140 C--------------AAAFG-----ATDGTINDLTERLMIR-LRDTVRLIIVDEADRLPYRALEELRRIHDKTG--IGVV  197 (297)
T ss_pred             H--------------HHHHC-----CCCHHHHHHHHHHHHH-HCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHC--CEEE
T ss_conf             9--------------98740-----1421688889999999-71576526650321258689999999887508--1599


Q ss_pred             EE
Q ss_conf             65
Q gi|254780217|r  165 LI  166 (347)
Q Consensus       165 Li  166 (347)
T Consensus       198 Lv  199 (297)
T COG2842         198 LV  199 (297)
T ss_pred             EE
T ss_conf             83