HHsearch alignment for GI: 254780217 and conserved domain: KOG0731

Probab=97.95  E-value=0.00038  Score=53.03  Aligned_cols=188  Identities=15%  Similarity=0.136  Sum_probs=95.8

Q ss_pred             CCCCHHHHCCHHHHHHHHHHHHH----------C-CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
Q ss_conf             58756561092999999999998----------2-889816631179898889999999999817799886431210126
Q gi|254780217|r    7 DPVYNQRLFGHEDIEKFLSQYYC----------S-GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPD   75 (347)
Q Consensus         7 ~p~~~~~i~G~~~~~~~L~~~~~----------~-~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~   75 (347)
T Consensus       306 t~V~FkDVAG~deAK~El~E~V~fLKNP~~Y~~lGAKiPkGvLL~GPPGTGKTLLAKAiAGE-------AgVPF~svSGS  378 (774)
T KOG0731         306 TGVKFKDVAGVDEAKEELMEFVKFLKNPEQYQELGAKIPKGVLLVGPPGTGKTLLAKAIAGE-------AGVPFFSVSGS  378 (774)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCC-------CCCCEEEECHH
T ss_conf             88760102670899999999999843989998747767675178789998678999988530-------58964641337


Q ss_pred             -C----------CCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCH
Q ss_conf             -7----------88679999678987545300100010134212323788755443102221111210353220554240
Q gi|254780217|r   76 -P----------CSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNR  144 (347)
Q Consensus        76 -~----------~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~  144 (347)
T Consensus       379 EFvE~~~g~~asrvr~lf~~ar~~aP~i-----------------ifideida~~~~r~-----G~--~~~~~~~e--~e  432 (774)
T KOG0731         379 EFVEMFVGVGASRVRDLFPLARKNAPSI-----------------IFIDEIDAVGRKRG-----GK--GTGGGQDE--RE  432 (774)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHCCCCEE-----------------EEECCCCCCCCCCC-----CC--CCCCCCHH--HH
T ss_conf             8888760343488899998743269807-----------------97145420031255-----66--66788807--88


Q ss_pred             HHHHHHHHHHH--HCCCCCCEEEEECCCCCCCHHHHC--EE-EEEECCCCCHHHHHHHHHHH----CCCCCHHHHHHHHH
Q ss_conf             00145677766--303434167650443357302520--36-98864799989999999972----78889678999999
Q gi|254780217|r  145 NAANALLKSLE--EPPQKVLFILISHASPTILSTIRS--RC-LSIKFNSLSENNLYKALEQL----KIMGWDSKRDFVKI  215 (347)
Q Consensus       145 ~AaNALLK~LE--EPp~~t~fiLit~~~~~il~TI~S--Rc-~~i~f~~l~~~~~~~~L~~~----~~~~~~~~~~~~~~  215 (347)
T Consensus       433 ~tlnQll~emDgf~~~~~vi~~a~tnr~d~ld~allrpGRfdr~i~i~~p~~~~r~~i~~~h~~~~~~~~e~~dl~~~a~  512 (774)
T KOG0731         433 QTLNQLLVEMDGFETSKGVIVLAATNRPDILDPALLRPGRFDRQIQIDLPDVKGRASILKVHLRKKKLDDEDVDLSKLAS  512 (774)
T ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf             89998878752776778479981168866428876498755552324698514168999998621577631567999986


Q ss_pred             HCCCCHHHHHHH
Q ss_conf             759897899988
Q gi|254780217|r  216 AAYGSVARAIKI  227 (347)
Q Consensus       216 ~s~Gs~~~A~~l  227 (347)
T Consensus       513 ~t~gf~gadl~n  524 (774)
T KOG0731         513 LTPGFSGADLAN  524 (774)
T ss_pred             CCCCCCHHHHHH
T ss_conf             089996789986