HHsearch alignment for GI: 254780217 and conserved domain: KOG0735

Probab=97.47  E-value=0.0016  Score=47.97  Aligned_cols=157  Identities=17%  Similarity=0.116  Sum_probs=83.9

Q ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCC
Q ss_conf             88981663117989888999999999981779988643121012678867999967898754530010001013421232
Q gi|254780217|r   31 GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVI  110 (347)
Q Consensus        31 ~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I  110 (347)
T Consensus       428 v~~~~~Ill~G~~GsGKT~L~kal~~~~~k-~~---~-~---------------------hv~~v~Cs~l----~-~--~  474 (952)
T KOG0735         428 VFRHGNILLNGPKGSGKTNLVKALFDYYSK-DL---I-A---------------------HVEIVSCSTL----D-G--S  474 (952)
T ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHHHHCC-CC---C-E---------------------EEEEEECHHC----C-C--H
T ss_conf             334661898679987776999999987515-65---0-6---------------------9999752210----4-2--0


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCH-----HH-----H---HHHH----HHHHHCCCCCCEEEEECCCCCC
Q ss_conf             3788755443102221111210353220554240-----00-----1---4567----7766303434167650443357
Q gi|254780217|r  111 TVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNR-----NA-----A---NALL----KSLEEPPQKVLFILISHASPTI  173 (347)
Q Consensus       111 ~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~-----~A-----a---NALL----K~LEEPp~~t~fiLit~~~~~i  173 (347)
T Consensus       475 ~~e~iQk~l~~vfse~~~~~PSiIvLDdld~l~~~s~~e~~q~~~~~~rla~flnqvi~~y~~~~~~ia~Iat~qe~qtl  554 (952)
T KOG0735         475 SLEKIQKFLNNVFSEALWYAPSIIVLDDLDCLASASSNENGQDGVVSERLAAFLNQVIKIYLKRNRKIAVIATGQELQTL  554 (952)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHC
T ss_conf             48999999999999988637808997050354056844477302899999999999999987068579999851434203


Q ss_pred             CHHHHCEE---EEEECCCCCHHHHHHHHHHH----CCCCCHHHHHHHHHHCCCC
Q ss_conf             30252036---98864799989999999972----7888967899999975989
Q gi|254780217|r  174 LSTIRSRC---LSIKFNSLSENNLYKALEQL----KIMGWDSKRDFVKIAAYGS  220 (347)
Q Consensus       174 l~TI~SRc---~~i~f~~l~~~~~~~~L~~~----~~~~~~~~~~~~~~~s~Gs  220 (347)
T Consensus       555 ~~~L~s~~~Fq~~~~L~ap~~~~R~~IL~~~~s~~~~~~~~~dLd~ls~~TEGy  608 (952)
T KOG0735         555 NPLLVSPLLFQIVIALPAPAVTRRKEILTTIFSKNLSDITMDDLDFLSVKTEGY  608 (952)
T ss_pred             CHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             853347631478881589235679999999997553454567899888760784