HHsearch alignment for GI: 254780217 and conserved domain: KOG1942

Probab=98.16  E-value=0.00026  Score=54.40  Aligned_cols=97  Identities=20%  Similarity=0.249  Sum_probs=75.4

Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEC-------------CCCCCCHHHHCEEEEEECCCCCHHHHHHHH
Q ss_conf             0353220554240001456777663034341676504-------------433573025203698864799989999999
Q gi|254780217|r  132 RVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILISH-------------ASPTILSTIRSRCLSIKFNSLSENNLYKAL  198 (347)
Q Consensus       132 Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit~-------------~~~~il~TI~SRc~~i~f~~l~~~~~~~~L  198 (347)
T Consensus       298 GVLFIDEVhMLDiEcFTyL~kalES~iaPivif-AsNrG~~~irGt~d~~sPhGip~dllDRl~Iirt~~y~~~e~r~Ii  376 (456)
T KOG1942         298 GVLFIDEVHMLDIECFTYLHKALESPIAPIVIF-ASNRGMCTIRGTEDILSPHGIPPDLLDRLLIIRTLPYDEEEIRQII  376 (456)
T ss_pred             CCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEE-ECCCCCEEECCCCCCCCCCCCCHHHHHHEEEEEECCCCHHHHHHHH
T ss_conf             626863013242699999999862778756999-6277610221776787878899778612667860369989999999


Q ss_pred             HH----HCCCCCHHHHHHHHHHCCC-CHHHHHHHHC
Q ss_conf             97----2788896789999997598-9789998814
Q gi|254780217|r  199 EQ----LKIMGWDSKRDFVKIAAYG-SVARAIKILH  229 (347)
Q Consensus       199 ~~----~~~~~~~~~~~~~~~~s~G-s~~~A~~ll~  229 (347)
T Consensus       377 ~~Ra~~E~l~~~e~a~~~l~~~gt~tsLRy~vqLl~  412 (456)
T KOG1942         377 KIRAQVEGLQVEEEALDLLAEIGTSTSLRYAVQLLT  412 (456)
T ss_pred             HHHHHHHCCEECHHHHHHHHHHCCCHHHHHHHHHCC
T ss_conf             998765142322889999876054145788988537