HHsearch alignment for GI: 254780217 and conserved domain: PRK05342
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.
Probab=98.58 E-value=1.5e-06 Score=72.45 Aligned_cols=114 Identities=24% Similarity=0.324 Sum_probs=69.7
Q ss_pred HHHCCHHHHHHHHHHHHHC--CC-------------CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
Q ss_conf 5610929999999999982--88-------------98166311798988899999999998177998864312101267
Q gi|254780217|r 12 QRLFGHEDIEKFLSQYYCS--GR-------------MHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDP 76 (347)
Q Consensus 12 ~~i~G~~~~~~~L~~~~~~--~~-------------l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~ 76 (347)
T Consensus 72 ~yVIGQ~~AKk~lsVAvyNHykRi~~~~~~~~~vei~KsNILliGPTG~GKTlla~tLAk~l~v-------PF~iaDA-- 142 (411)
T PRK05342 72 QYVIGQERAKKVLSVAVYNHYKRLRQNGSKSDDVELQKSNILLIGPTGSGKTLLAQTLARILNV-------PFAIADA-- 142 (411)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC-------CEEEEEE--
T ss_conf 1402848888999999999999986021335665213453899899997788999999998699-------9899861--
Q ss_pred CCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHH-HHHHHHHCCCCCCCCCCHHHHHHHHHHCCH-----------
Q ss_conf 88679999678987545300100010134212323788-755443102221111210353220554240-----------
Q gi|254780217|r 77 CSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDE-IRRIRYFLSLTANTGYWRVIMIDPVDGMNR----------- 144 (347)
Q Consensus 77 ~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~-IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~----------- 144 (347)
T Consensus 143 ----T~lTE-----------------aGYVGe--DVE~ii~~Llq~Ad~dve~Ae~GIV~IDEIDKIarks~~~s~trDV 199 (411)
T PRK05342 143 ----TTLTE-----------------AGYVGE--DVENILLKLLQAADYDVEKAQRGIVYIDEIDKIARKSENPSITRDV 199 (411)
T ss_pred ----CEECC-----------------CCCCCC--CHHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHHCCCCCCCCCCC
T ss_conf ----20012-----------------674560--7999999999982888998836828885023454247888887776
Q ss_pred ---HHHHHHHHHHHHC
Q ss_conf ---0014567776630
Q gi|254780217|r 145 ---NAANALLKSLEEP 157 (347)
Q Consensus 145 ---~AaNALLK~LEEP 157 (347)
T Consensus 200 SgEGVQqaLLkiiEGt 215 (411)
T PRK05342 200 SGEGVQQALLKILEGT 215 (411)
T ss_pred CCHHHHHHHHHHHCCC
T ss_conf 5124899999987587