HHsearch alignment for GI: 254780217 and conserved domain: PRK06620

Probab=97.91  E-value=0.00016  Score=56.09  Aligned_cols=158  Identities=17%  Similarity=0.243  Sum_probs=93.5

Q ss_pred             CCHHH--HHHHHHHHHHC---CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCC
Q ss_conf             09299--99999999982---88981663117989888999999999981779988643121012678867999967898
Q gi|254780217|r   15 FGHED--IEKFLSQYYCS---GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHAL   89 (347)
Q Consensus        15 ~G~~~--~~~~L~~~~~~---~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~h   89 (347)
T Consensus        20 vs~~N~~A~~~i~~wp~~~~~~~~~~~l~I~Gp~gSGKTHL~~i~~~~~~a-----------------------------   70 (214)
T PRK06620         20 VSSSNDQAYNIIKNWQCMFGVNPYKFTLLIKGPSSSGKTYLTKIWQNLSNA-----------------------------   70 (214)
T ss_pred             ECCCHHHHHHHHHHCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC-----------------------------
T ss_conf             768699999999836302566865555999879999889999999998285-----------------------------


Q ss_pred             CCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf             75453001000101342123237887554431022211112103532205542400014567776630343416765044
Q gi|254780217|r   90 HDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILISHA  169 (347)
Q Consensus        90 pd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit~~  169 (347)
T Consensus        71 ---~~~~~~~~-----------~~~~------------~~~~~~~iiddid~~~e~~lfhlfN~~~~--~~~~llits~~  122 (214)
T PRK06620         71 ---YIIKDIFF-----------NEEI------------LEKYNAFIIEDIENWQEPALLHIFNIINE--KQKYLLLTSSD  122 (214)
T ss_pred             ---EEECHHHC-----------CHHH------------HHHCCCEEEECCCCCCHHHHHHHHHHHHH--CCCEEEEEECC
T ss_conf             ---88151214-----------5878------------84379379846775746799999999971--59879998279


Q ss_pred             CC-C-CCHHHHCEE---EEEECCCCCHHHHHHHHHH----HCCCCCHHHHHHHHHHCCCCHHHHHHHHC
Q ss_conf             33-5-730252036---9886479998999999997----27888967899999975989789998814
Q gi|254780217|r  170 SP-T-ILSTIRSRC---LSIKFNSLSENNLYKALEQ----LKIMGWDSKRDFVKIAAYGSVARAIKILH  229 (347)
Q Consensus       170 ~~-~-il~TI~SRc---~~i~f~~l~~~~~~~~L~~----~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~  229 (347)
T Consensus       123 ~p~~~~L~DL~SRl~~~~~~~i~~PdD~l~~~ll~k~~~~r~i~i~~~vi~yl~~ri~Rs~~~l~~~v~  191 (214)
T PRK06620        123 KSRNFTLPDLSSRIKSVLSILLNSPDDELIKILIFKHFSISSVTISRQIIDFLLVNLPREYSKIIEILE  191 (214)
T ss_pred             CCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             852245357899985464433269898999999999999869988755999999985178999999999