HHsearch alignment for GI: 254780217 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00 E-value=0 Score=446.11 Aligned_cols=216 Identities=28% Similarity=0.379 Sum_probs=202.8
Q ss_pred CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC----CCCCCCHHHCCCCC
Q ss_conf 96655558756561092999999999998288981663117989888999999999981779----98864312101267
Q gi|254780217|r 1 MIDRAFDPVYNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNP----DFSKAPVRMCNPDP 76 (347)
Q Consensus 1 ~~~~~~~p~~~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~----~~~~~~~~~~~~~~ 76 (347)
T Consensus 10 ~la~KyRP~~f~~liGQ~~~~~~l~n~i~~~~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~c~~-- 87 (507)
T PRK06645 10 PFARKYRPSNFAELQGQEVLVKVLSYTILNDRLAGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEKCTN-- 87 (507)
T ss_pred EEEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH--
T ss_conf 643200799765623939999999999973996634774587997889999999999679998888998888888767--
Q ss_pred CCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 88679999678987545300100010134212323788755443102221111210353220554240001456777663
Q gi|254780217|r 77 CSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEE 156 (347)
Q Consensus 77 ~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEE 156 (347)
T Consensus 88 ----c~~i~~~~~~dv~EiDaas~~---------gv~~ir~l~~~~~~~p~~~~~kv~iidE~hmls~~a~nallktlEe 154 (507)
T PRK06645 88 ----CISFNNHNHPDIIEIDAASKT---------SVDDIRRIIESAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEE 154 (507)
T ss_pred ----HHHHHCCCCCCEEEEECCCCC---------CHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHC
T ss_conf ----899865899985996378888---------8899999986355178767435899521422489999999997427
Q ss_pred CCCCCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHHH----HHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC
Q ss_conf 0343416765044335730252036988647999899999999----72788896789999997598978999881457
Q gi|254780217|r 157 PPQKVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKALE----QLKIMGWDSKRDFVKIAAYGSVARAIKILHYD 231 (347)
Q Consensus 157 Pp~~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L~----~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~~ 231 (347)
T Consensus 155 pp~~~~Fi~atte~~kip~ti~srcq~f~~~~i~~~~i~~~l~~i~~~E~~~~~~~al~~ia~~a~Gs~RDalslldqa 233 (507)
T PRK06645 155 PPPHIIFIFATTEVQKIPATIISRCQRYDLRRLSFEEIFKLLEYITKQENLKADIEALRIIAYKSEGSARDAVSILDQA 233 (507)
T ss_pred CCCCEEEEEECCCHHHCCHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 8644389997485364837888543278754599799999999999976877778999999985599867899999999