HHsearch alignment for GI: 254780217 and conserved domain: PRK06645

>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00  E-value=0  Score=446.11  Aligned_cols=216  Identities=28%  Similarity=0.379  Sum_probs=202.8

Q ss_pred             CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC----CCCCCCHHHCCCCC
Q ss_conf             96655558756561092999999999998288981663117989888999999999981779----98864312101267
Q gi|254780217|r    1 MIDRAFDPVYNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNP----DFSKAPVRMCNPDP   76 (347)
Q Consensus         1 ~~~~~~~p~~~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~----~~~~~~~~~~~~~~   76 (347)
T Consensus        10 ~la~KyRP~~f~~liGQ~~~~~~l~n~i~~~~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~c~~--   87 (507)
T PRK06645         10 PFARKYRPSNFAELQGQEVLVKVLSYTILNDRLAGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEKCTN--   87 (507)
T ss_pred             EEEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH--
T ss_conf             643200799765623939999999999973996634774587997889999999999679998888998888888767--


Q ss_pred             CCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             88679999678987545300100010134212323788755443102221111210353220554240001456777663
Q gi|254780217|r   77 CSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEE  156 (347)
Q Consensus        77 ~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEE  156 (347)
T Consensus        88 ----c~~i~~~~~~dv~EiDaas~~---------gv~~ir~l~~~~~~~p~~~~~kv~iidE~hmls~~a~nallktlEe  154 (507)
T PRK06645         88 ----CISFNNHNHPDIIEIDAASKT---------SVDDIRRIIESAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEE  154 (507)
T ss_pred             ----HHHHHCCCCCCEEEEECCCCC---------CHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHC
T ss_conf             ----899865899985996378888---------8899999986355178767435899521422489999999997427


Q ss_pred             CCCCCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHHH----HHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC
Q ss_conf             0343416765044335730252036988647999899999999----72788896789999997598978999881457
Q gi|254780217|r  157 PPQKVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKALE----QLKIMGWDSKRDFVKIAAYGSVARAIKILHYD  231 (347)
Q Consensus       157 Pp~~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L~----~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~~  231 (347)
T Consensus       155 pp~~~~Fi~atte~~kip~ti~srcq~f~~~~i~~~~i~~~l~~i~~~E~~~~~~~al~~ia~~a~Gs~RDalslldqa  233 (507)
T PRK06645        155 PPPHIIFIFATTEVQKIPATIISRCQRYDLRRLSFEEIFKLLEYITKQENLKADIEALRIIAYKSEGSARDAVSILDQA  233 (507)
T ss_pred             CCCCEEEEEECCCHHHCCHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             8644389997485364837888543278754599799999999999976877778999999985599867899999999