HHsearch alignment for GI: 254780217 and conserved domain: PRK06749
>PRK06749 replicative DNA helicase; Provisional.
Probab=90.25 E-value=0.33 Score=29.39 Aligned_cols=133 Identities=11% Similarity=0.022 Sum_probs=0.0
Q ss_pred HHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCE
Q ss_conf 61092999999999998288981663117989888999999999981779988643121012678867999967898754
Q gi|254780217|r 13 RLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDF 92 (347)
Q Consensus 13 ~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~ 92 (347)
T Consensus 165 ~~~Gi~TGf~~LD~lt~Gl~~g~LiviaaRPsmGKTa~alnia~~~a--~~g~~v~~fSlEMs~~~l~~R~ls~~s~v~~ 242 (428)
T PRK06749 165 EITGIETGYTSLNKMTCGLQEGDFVVLGARPSMGKTAFALNVGLHAA--KSGAAVGLFSLEMSSKQLLKRMASCVGEVSG 242 (428)
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEEECCCCHHHHHHHHHHHHCCCCH
T ss_conf 98768778388987524999886899962798976899999999999--6499279983789999999999997549988
Q ss_pred EEECCCCHHHCCCC--------------------CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHH
Q ss_conf 53001000101342--------------------123237887554431022211112103532205542400014
Q gi|254780217|r 93 LYLSYSLNPKTGKW--------------------RTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAAN 148 (347)
Q Consensus 93 ~~i~~~~~~k~~~~--------------------~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaN 148 (347)
T Consensus 243 ~~i~~~~~~~~~~~~~~~~~a~~~l~~~~l~i~d~~~~ti~~i~~~~r~~~~~~g~~~~-livIDYlqLi~~~~~~ 317 (428)
T PRK06749 243 GRLKNPKHRFAMEDWEKVSKAFAEIGELPLEIYDNAGVTVQDIWMQTRKLKRKHGDKKV-LIIVDYLQLITGDPKH 317 (428)
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCE-EEEEEHHHHCCCCCCC
T ss_conf 88627767799999999999999985596599758997679999999999997499876-9997677650578777