HHsearch alignment for GI: 254780217 and conserved domain: PRK07399
>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=100.00 E-value=0 Score=394.56 Aligned_cols=207 Identities=28% Similarity=0.354 Sum_probs=177.8
Q ss_pred CHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCC
Q ss_conf 56561092999999999998288981663117989888999999999981779988643121012678867999967898
Q gi|254780217|r 10 YNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHAL 89 (347)
Q Consensus 10 ~~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~h 89 (347)
T Consensus 2 ~F~~iiGq~~~~~~L~~ai~~~rl~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~-----~~~~~~~------~-ri~~~nH 69 (314)
T PRK07399 2 LFANLIGQPLAIELLTAAIEQNRIAPAYLFAGPEGVGRKLAALRFIEGLLSQG-----SPSKNIR------R-RLEEGNH 69 (314)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC-----CCCCCHH------H-HHHCCCC
T ss_conf 83312594999999999998599674487789998329999999999985789-----9997665------5-8751899
Q ss_pred CCEEEECCCCHHH--------------CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 7545300100010--------------13421232378875544310222111121035322055424000145677766
Q gi|254780217|r 90 HDFLYLSYSLNPK--------------TGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLE 155 (347)
Q Consensus 90 pd~~~i~~~~~~k--------------~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LE 155 (347)
T Consensus 70 PDl~~i~P~~~~~g~~~~~~~~~~~~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m~~~AaNaLLKtLE 149 (314)
T PRK07399 70 PDLLWVEPTYQHQGKLITASEAEEAGLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETMNEAAANALLKTLE 149 (314)
T ss_pred CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHC
T ss_conf 97788605620034545577898765302687778799999999997318856884799988978719999999998614
Q ss_pred HCCCCCCEEEEECCCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHCCCC-CHHHHHHHHHHCCCCHHHHHHHHC
Q ss_conf 30343416765044335730252036988647999899999999727888-967899999975989789998814
Q gi|254780217|r 156 EPPQKVLFILISHASPTILSTIRSRCLSIKFNSLSENNLYKALEQLKIMG-WDSKRDFVKIAAYGSVARAIKILH 229 (347)
Q Consensus 156 EPp~~t~fiLit~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L~~~~~~~-~~~~~~~~~~~s~Gs~~~A~~ll~ 229 (347)
T Consensus 150 EP~-~~~fILit~~~~~lLpTI~SRCQ~i~F~~l~~~~i~~~L~~~~~~~~~~~~~~~l~~~A~GspG~a~~~~~ 223 (314)
T PRK07399 150 EPG-NGTLILIAPSPESLLPTIVSRCQIIPFYRLSDEQLEQVLKRLGDNINEILDHPELLALAQGSPGAAIANIE 223 (314)
T ss_pred CCC-CCEEEEEECCHHHCCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 787-85699997993649146641875633899899999999997166433102789999881799799999999