HHsearch alignment for GI: 254780217 and conserved domain: PRK07993
>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=100.00 E-value=0 Score=432.57 Aligned_cols=305 Identities=19% Similarity=0.228 Sum_probs=234.8
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEEC
Q ss_conf 29999999999982889816631179898889999999999817799886431210126788679999678987545300
Q gi|254780217|r 17 HEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLS 96 (347)
Q Consensus 17 ~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~ 96 (347)
T Consensus 7 l~~~~~~l~~~~~~~rl~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~~------C~l~~~~~HPD~~~i~ 80 (334)
T PRK07993 7 LRPDYEKLVGSYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG------CQLMQAGTHPDYYTLT 80 (334)
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH------HHHHHCCCCCCEEEEC
T ss_conf 7899999999998598104675479999889999999999981899999999999978------9998668999847753
Q ss_pred CCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH
Q ss_conf 10001013421232378875544310222111121035322055424000145677766303434167650443357302
Q gi|254780217|r 97 YSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILISHASPTILST 176 (347)
Q Consensus 97 ~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit~~~~~il~T 176 (347)
T Consensus 81 pe------~~~~~I~IdqIR~l~~~~~~~~~~g~~kV~iI~~Ae~mn~~AaNaLLKtLEEPp~~t~~iL~t~~~~~lLpT 154 (334)
T PRK07993 81 PE------KGKSSLGVDAVREVTEKLYEHARLGGAKVVWLPDAALLTDAAANALLKTLEEPPEKTWFFLACREPARLLAT 154 (334)
T ss_pred CC------CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCH
T ss_conf 42------234559999999999998436656994799976677759999999998612799884999866985657238
Q ss_pred HHCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 52036988647999899999999727888967899999975989789998814577999999999840323432289999
Q gi|254780217|r 177 IRSRCLSIKFNSLSENNLYKALEQLKIMGWDSKRDFVKIAAYGSVARAIKILHYDCDKIISSYIDLIHIPRQEYALQKMQ 256 (347)
Q Consensus 177 I~SRc~~i~f~~l~~~~~~~~L~~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 256 (347)
T Consensus 155 I~SRCq~~~~~~~~~~~~~~wL~~~~~-~~~~~~~~al~la~Gspl~A~~l~~~~~~~~r~~l~~~l~~~l~~~---d~~ 230 (334)
T PRK07993 155 LRSRCRLHYLAPPPEQYALTWLSREVT-MSQEALLAALRLSAGAPGAALALLQPERWQQREALCQALAYSLPSG---DWY 230 (334)
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHCC-CCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC---CHH
T ss_conf 875230415899799999999987368-9889999999984998999999825658999999999999987036---799
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHHHHHH-HCCCCHHH
Q ss_conf 9999983167699999999999999999999865410-----------04548999999999999999876-22799799
Q gi|254780217|r 257 QIADELLSQDQKIAFDFLIEFILKEICKSAKAAALSG-----------QLEEADQIAQIYFSLVKRVHAFS-MYNLDRRQ 324 (347)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-----------~~~~~~~l~~~~~~i~~~~~~~~-~~NLd~~~ 324 (347)
T Consensus 231 ~ll~~l~~~~~~~~L~wl~~ll~D~l~~~~~~~~l~n~D~~~~i~~la~~~s~~~L~~~~~~i~~~r~~L~~~~NlN~qL 310 (334)
T PRK07993 231 SLLPALNHEQAPARLHWLATLLMDALKRQHGAAQVTNVDQPPLVAQLANHLSPARLQAILGDVCHCREQLLSVTGVNREL 310 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 99999716348999999999999999986085301487799999999850999999999999999999975268999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999997278
Q gi|254780217|r 325 MIFHLLSKARECN 337 (347)
Q Consensus 325 ~ll~ll~~l~~~~ 337 (347)
T Consensus 311 lLE~lll~~~~~l 323 (334)
T PRK07993 311 LLTDLLLRIEHYL 323 (334)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999973