HHsearch alignment for GI: 254780217 and conserved domain: PRK07993

>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=100.00  E-value=0  Score=432.57  Aligned_cols=305  Identities=19%  Similarity=0.228  Sum_probs=234.8

Q ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEEC
Q ss_conf             29999999999982889816631179898889999999999817799886431210126788679999678987545300
Q gi|254780217|r   17 HEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLS   96 (347)
Q Consensus        17 ~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~   96 (347)
T Consensus         7 l~~~~~~l~~~~~~~rl~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~~------C~l~~~~~HPD~~~i~   80 (334)
T PRK07993          7 LRPDYEKLVGSYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRG------CQLMQAGTHPDYYTLT   80 (334)
T ss_pred             CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH------HHHHHCCCCCCEEEEC
T ss_conf             7899999999998598104675479999889999999999981899999999999978------9998668999847753


Q ss_pred             CCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH
Q ss_conf             10001013421232378875544310222111121035322055424000145677766303434167650443357302
Q gi|254780217|r   97 YSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILISHASPTILST  176 (347)
Q Consensus        97 ~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit~~~~~il~T  176 (347)
T Consensus        81 pe------~~~~~I~IdqIR~l~~~~~~~~~~g~~kV~iI~~Ae~mn~~AaNaLLKtLEEPp~~t~~iL~t~~~~~lLpT  154 (334)
T PRK07993         81 PE------KGKSSLGVDAVREVTEKLYEHARLGGAKVVWLPDAALLTDAAANALLKTLEEPPEKTWFFLACREPARLLAT  154 (334)
T ss_pred             CC------CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCH
T ss_conf             42------234559999999999998436656994799976677759999999998612799884999866985657238


Q ss_pred             HHCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             52036988647999899999999727888967899999975989789998814577999999999840323432289999
Q gi|254780217|r  177 IRSRCLSIKFNSLSENNLYKALEQLKIMGWDSKRDFVKIAAYGSVARAIKILHYDCDKIISSYIDLIHIPRQEYALQKMQ  256 (347)
Q Consensus       177 I~SRc~~i~f~~l~~~~~~~~L~~~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~~~~~~~~~~~~~l~~~~~~~~~~~~~  256 (347)
T Consensus       155 I~SRCq~~~~~~~~~~~~~~wL~~~~~-~~~~~~~~al~la~Gspl~A~~l~~~~~~~~r~~l~~~l~~~l~~~---d~~  230 (334)
T PRK07993        155 LRSRCRLHYLAPPPEQYALTWLSREVT-MSQEALLAALRLSAGAPGAALALLQPERWQQREALCQALAYSLPSG---DWY  230 (334)
T ss_pred             HHHHCCCCCCCCCCHHHHHHHHHHHCC-CCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC---CHH
T ss_conf             875230415899799999999987368-9889999999984998999999825658999999999999987036---799


Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHHHHHH-HCCCCHHH
Q ss_conf             9999983167699999999999999999999865410-----------04548999999999999999876-22799799
Q gi|254780217|r  257 QIADELLSQDQKIAFDFLIEFILKEICKSAKAAALSG-----------QLEEADQIAQIYFSLVKRVHAFS-MYNLDRRQ  324 (347)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-----------~~~~~~~l~~~~~~i~~~~~~~~-~~NLd~~~  324 (347)
T Consensus       231 ~ll~~l~~~~~~~~L~wl~~ll~D~l~~~~~~~~l~n~D~~~~i~~la~~~s~~~L~~~~~~i~~~r~~L~~~~NlN~qL  310 (334)
T PRK07993        231 SLLPALNHEQAPARLHWLATLLMDALKRQHGAAQVTNVDQPPLVAQLANHLSPARLQAILGDVCHCREQLLSVTGVNREL  310 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf             99999716348999999999999999986085301487799999999850999999999999999999975268999999


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999997278
Q gi|254780217|r  325 MIFHLLSKARECN  337 (347)
Q Consensus       325 ~ll~ll~~l~~~~  337 (347)
T Consensus       311 lLE~lll~~~~~l  323 (334)
T PRK07993        311 LLTDLLLRIEHYL  323 (334)
T ss_pred             HHHHHHHHHHHHC
T ss_conf             9999999999973