HHsearch alignment for GI: 254780217 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=96.70 E-value=0.0045 Score=44.40 Aligned_cols=118 Identities=14% Similarity=0.194 Sum_probs=69.3
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHH
Q ss_conf 16631179898889999999999817799886431210126788679999678987545300100010134212323788
Q gi|254780217|r 35 HALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDE 114 (347)
Q Consensus 35 ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~ 114 (347)
T Consensus 107 ~Nvil~Gp~GtGKThLA~Alg~~A~-~------------------------~G~--~V~f~~~~~-----------L~~~ 148 (269)
T PRK08181 107 ANLLLFGPPGGGKSHLAAAIGLALI-E------------------------NGW--RVLFTRTTD-----------LVQK 148 (269)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHH-H------------------------CCC--EEEEEEHHH-----------HHHH
T ss_conf 7089989999878899999999999-8------------------------799--399978999-----------9999
Q ss_pred HHHHHHHCC---CCCCCCCCHHHHHHHHHHC--CHHHHHHHHHHHHHCCCCCCEEEEECCCC--------------CCCH
Q ss_conf 755443102---2211112103532205542--40001456777663034341676504433--------------5730
Q gi|254780217|r 115 IRRIRYFLS---LTANTGYWRVIMIDPVDGM--NRNAANALLKSLEEPPQKVLFILISHASP--------------TILS 175 (347)
Q Consensus 115 IR~l~~~~~---~~~~~~~~Ki~IId~ad~l--n~~AaNALLK~LEEPp~~t~fiLit~~~~--------------~il~ 175 (347)
T Consensus 149 L~~a~~~~~~~~~~~~l~~~dLLIiDe~G~~~~~~~~~~~lf~lI~~Rye~~S~IITSn~~~~~W~~~f~D~~la~AiLD 228 (269)
T PRK08181 149 LQVARRELQLESAIAKLDKFDLLILDDLAYVTKDQAETSVLFELISARYERRSILITANQPFGEWNRVFPDPAMTLAAVD 228 (269)
T ss_pred HHHHHHCCCHHHHHHHHHCCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCHHHHHHHHH
T ss_conf 99977558399999997444601220105667998999999999999857888899889997788775386889999999
Q ss_pred HHHCEEEEEECCCCC
Q ss_conf 252036988647999
Q gi|254780217|r 176 TIRSRCLSIKFNSLS 190 (347)
Q Consensus 176 TI~SRc~~i~f~~l~ 190 (347)
T Consensus 229 RLvH~a~~i~l~GeS 243 (269)
T PRK08181 229 RLVHHATIFEMNVES 243 (269)
T ss_pred HHHCCEEEEEECCCC
T ss_conf 870152899755876