HHsearch alignment for GI: 254780217 and conserved domain: PRK09087

Probab=97.81  E-value=0.00067  Score=51.05  Aligned_cols=164  Identities=13%  Similarity=0.135  Sum_probs=96.0

Q ss_pred             CHHHH-CCH--HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHC
Q ss_conf             56561-092--999999999998288981663117989888999999999981779988643121012678867999967
Q gi|254780217|r   10 YNQRL-FGH--EDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMAS   86 (347)
Q Consensus        10 ~~~~i-~G~--~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~   86 (347)
T Consensus        19 ~~dnF~vs~~N~~a~~~l~-~~~~w~~~-~~~L~Gp~gsGKTHL~~~~~~~~~a--------------------------   70 (226)
T PRK09087         19 GRDDLVVTESNRAAVSLVD-RWPNWPSP-VVVLAGPVGSGKTHLASIWREKADA--------------------------   70 (226)
T ss_pred             CCCCEEECCCHHHHHHHHH-HCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHCC--------------------------
T ss_conf             7336477576999999998-47267777-5899899999886999999998099--------------------------


Q ss_pred             CCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC-CCCEEE
Q ss_conf             8987545300100010134212323788755443102221111210353220554240001456777663034-341676
Q gi|254780217|r   87 HALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQ-KVLFIL  165 (347)
Q Consensus        87 ~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~-~t~fiL  165 (347)
T Consensus        71 ------~~~~~~----------~~~~~~~-------~----~~~~~~~~idd~d~~~~d-Ee~LFhl~N~~~~~~~~LLl  122 (226)
T PRK09087         71 ------LLVHPN----------EIGSDAA-------N----AAAERPVLIEDIDAGGFD-ETGLFHLINSVRQAGTSLLM  122 (226)
T ss_pred             ------EEECHH----------HCCHHHH-------H----HHCCCCEEEECCCCCCCC-HHHHHHHHHHHHHCCCEEEE
T ss_conf             ------683668----------7474667-------6----532798899748777747-89999999999853987999


Q ss_pred             EECC-CCC---CCHHHHCEE---EEEECCCCCHHHHHHHHHH----HCCCCCHHHHHHHHHHCCCCHHHHHHHHC
Q ss_conf             5044-335---730252036---9886479998999999997----27888967899999975989789998814
Q gi|254780217|r  166 ISHA-SPT---ILSTIRSRC---LSIKFNSLSENNLYKALEQ----LKIMGWDSKRDFVKIAAYGSVARAIKILH  229 (347)
Q Consensus       166 it~~-~~~---il~TI~SRc---~~i~f~~l~~~~~~~~L~~----~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~  229 (347)
T Consensus       123 ts~~~p~~l~~~L~DL~SRL~~~~~~~I~~pdD~ll~~~L~k~~~~r~l~l~~~v~~yll~r~~Rs~~~l~~~l~  197 (226)
T PRK09087        123 TSRLWPSAWNVKLPDLKSRLKAATVVEIGEPDDALLSGVIFKLFADRQLYVEPHVVYYLVSRMERSLFAAQTIVE  197 (226)
T ss_pred             ECCCCHHHCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             889895666762468999985785798359998999999999987576578888999999845889999999999