HHsearch alignment for GI: 254780217 and conserved domain: PRK09302
>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=94.02 E-value=0.046 Score=36.24 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=25.9
Q ss_pred HHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999828-8981663117989888999999999981
Q gi|254780217|r 24 LSQYYCSG-RMHHALLFEGEQGIGKATLGFRYAGHVL 59 (347)
Q Consensus 24 L~~~~~~~-~l~ha~Lf~Gp~GiGK~~~A~~~A~~ll 59 (347)
T Consensus 255 LD~llgGGl~~GsstLi~Gp~GtGKTtla~qFl~~~a 291 (501)
T PRK09302 255 LDEMCGGGFFRGSIILVSGATGTGKTLLVSKFAEAAC 291 (501)
T ss_pred HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 7887259975894699988999888999999999998