HHsearch alignment for GI: 254780217 and conserved domain: PRK10536
>PRK10536 hypothetical protein; Provisional.
Probab=96.53 E-value=0.0089 Score=42.02 Aligned_cols=149 Identities=15% Similarity=0.196 Sum_probs=77.5
Q ss_pred CCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHH
Q ss_conf 66555587565610929999999999982889816631179898889999999999817799886431210126788679
Q gi|254780217|r 2 IDRAFDPVYNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFV 81 (347)
Q Consensus 2 ~~~~~~p~~~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~ 81 (347)
T Consensus 45 ~~~~~~~~~~~pi~pkt~~Q~~yi~~i~~~~i---vf~~GpAGTGKT~lA~a~Al~~l~~~~~~kII---ltR----P-- 112 (262)
T PRK10536 45 IGMARDSRDTSPILARNEAQLHYLKAIESKQL---IFATGEAGCGKTWISAAKAAEALIHKDVDRII---VTR----P-- 112 (262)
T ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCE---EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEE---EEC----C--
T ss_conf 43302678899867898649999999861983---99989998758999999999999858886899---966----7--
Q ss_pred HHHHCCCCCCEEEECCCCHHHCCC--------CCCCCCHHHHHHH-------HHHCCCCCCCC---CCHHHHHHHHHHCC
Q ss_conf 999678987545300100010134--------2123237887554-------43102221111---21035322055424
Q gi|254780217|r 82 KQMASHALHDFLYLSYSLNPKTGK--------WRTVITVDEIRRI-------RYFLSLTANTG---YWRVIMIDPVDGMN 143 (347)
Q Consensus 82 ~~i~~~~hpd~~~i~~~~~~k~~~--------~~~~I~vd~IR~l-------~~~~~~~~~~~---~~Ki~IId~ad~ln 143 (347)
T Consensus 113 -~V~~ge--~lGfLPGdl~EK~~Pyl~Pi~D~L~~~lg~~~~~~~~~~e~G~Iei~PlafmRGrTf~na~IIvDEaQN~T 189 (262)
T PRK10536 113 -VLQADE--DLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDEAQNVT 189 (262)
T ss_pred -CCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEEEEHHHCCC
T ss_conf -875676--66769898799887888789999999968599999987305948998758744775144289984121289
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 0001456777663034341676504
Q gi|254780217|r 144 RNAANALLKSLEEPPQKVLFILISH 168 (347)
Q Consensus 144 ~~AaNALLK~LEEPp~~t~fiLit~ 168 (347)
T Consensus 190 ~~qmk~iLTRiG---~~SKiVi~GD 211 (262)
T PRK10536 190 AAQMKMFLTRLG---ENVTVIVNGD 211 (262)
T ss_pred HHHHHHHHHHCC---CCCEEEEECC
T ss_conf 999988985425---9968999688