HHsearch alignment for GI: 254780217 and conserved domain: PRK10923
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=97.83 E-value=0.0009 Score=50.03 Aligned_cols=161 Identities=17% Similarity=0.238 Sum_probs=84.1
Q ss_pred CCHHHHCCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH--CCCCCCCHHHHHHH
Q ss_conf 7565610929999999999982-88981663117989888999999999981779988643121--01267886799996
Q gi|254780217|r 9 VYNQRLFGHEDIEKFLSQYYCS-GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRM--CNPDPCSPFVKQMA 85 (347)
Q Consensus 9 ~~~~~i~G~~~~~~~L~~~~~~-~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~--~~~~~~~~~~~~i~ 85 (347)
T Consensus 135 ~~~~~liG~S~~m~~v~~~i~~~a~~~~pVLI~GE~GTGK~~~Ar~IH----~~S~r~~~pfi~vnC~~~~~~~~e~eLF 210 (469)
T PRK10923 135 GPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALH----RHSPRAKAPFIALNMAAIPKDLIESELF 210 (469)
T ss_pred CCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH----HCCCCCCCCCEEEECCCCCHHHHHHHHH
T ss_conf 675565468999999999999985889978998989826999999999----7488779995787678899778999970
Q ss_pred CCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC--------
Q ss_conf 789875453001000101342123237887554431022211112103532205542400014567776630--------
Q gi|254780217|r 86 SHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEP-------- 157 (347)
Q Consensus 86 ~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEP-------- 157 (347)
T Consensus 211 -G~~------------~-gaf~---ga~~~~--~g~~e~--a~~G--TLfLdeI~~L~~~~Q~kLl~~L~~~~~~~~g~~ 267 (469)
T PRK10923 211 -GHE------------K-GAFT---GANTIR--QGRFEQ--ADGG--TLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGY 267 (469)
T ss_pred -CCC------------C-CCCC---CCCCCC--CCCHHH--CCCC--CEEHHHHHHCCHHHHHHHHHHHHCCCEEECCCC
T ss_conf -876------------6-7878---864245--873664--3899--265663664899999999999855937857998
Q ss_pred ---CCCCCEEEEECCC-------CCCCHHHHCEEE--EEECCCCCH--HHHHH
Q ss_conf ---3434167650443-------357302520369--886479998--99999
Q gi|254780217|r 158 ---PQKVLFILISHAS-------PTILSTIRSRCL--SIKFNSLSE--NNLYK 196 (347)
Q Consensus 158 ---p~~t~fiLit~~~-------~~il~TI~SRc~--~i~f~~l~~--~~~~~ 196 (347)
T Consensus 268 ~~~~~d~RiIaat~~~L~~~v~~g~Fr~dLyyrL~~~~I~lPpLReR~eDI~~ 320 (469)
T PRK10923 268 APVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR 320 (469)
T ss_pred CEEEECCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHH
T ss_conf 51221437997078799998660817799998644240158465446534999