HHsearch alignment for GI: 254780217 and conserved domain: PRK10923

>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=97.83  E-value=0.0009  Score=50.03  Aligned_cols=161  Identities=17%  Similarity=0.238  Sum_probs=84.1

Q ss_pred             CCHHHHCCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH--CCCCCCCHHHHHHH
Q ss_conf             7565610929999999999982-88981663117989888999999999981779988643121--01267886799996
Q gi|254780217|r    9 VYNQRLFGHEDIEKFLSQYYCS-GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRM--CNPDPCSPFVKQMA   85 (347)
Q Consensus         9 ~~~~~i~G~~~~~~~L~~~~~~-~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~--~~~~~~~~~~~~i~   85 (347)
T Consensus       135 ~~~~~liG~S~~m~~v~~~i~~~a~~~~pVLI~GE~GTGK~~~Ar~IH----~~S~r~~~pfi~vnC~~~~~~~~e~eLF  210 (469)
T PRK10923        135 GPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALH----RHSPRAKAPFIALNMAAIPKDLIESELF  210 (469)
T ss_pred             CCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH----HCCCCCCCCCEEEECCCCCHHHHHHHHH
T ss_conf             675565468999999999999985889978998989826999999999----7488779995787678899778999970


Q ss_pred             CCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC--------
Q ss_conf             789875453001000101342123237887554431022211112103532205542400014567776630--------
Q gi|254780217|r   86 SHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEP--------  157 (347)
Q Consensus        86 ~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEP--------  157 (347)
T Consensus       211 -G~~------------~-gaf~---ga~~~~--~g~~e~--a~~G--TLfLdeI~~L~~~~Q~kLl~~L~~~~~~~~g~~  267 (469)
T PRK10923        211 -GHE------------K-GAFT---GANTIR--QGRFEQ--ADGG--TLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGY  267 (469)
T ss_pred             -CCC------------C-CCCC---CCCCCC--CCCHHH--CCCC--CEEHHHHHHCCHHHHHHHHHHHHCCCEEECCCC
T ss_conf             -876------------6-7878---864245--873664--3899--265663664899999999999855937857998


Q ss_pred             ---CCCCCEEEEECCC-------CCCCHHHHCEEE--EEECCCCCH--HHHHH
Q ss_conf             ---3434167650443-------357302520369--886479998--99999
Q gi|254780217|r  158 ---PQKVLFILISHAS-------PTILSTIRSRCL--SIKFNSLSE--NNLYK  196 (347)
Q Consensus       158 ---p~~t~fiLit~~~-------~~il~TI~SRc~--~i~f~~l~~--~~~~~  196 (347)
T Consensus       268 ~~~~~d~RiIaat~~~L~~~v~~g~Fr~dLyyrL~~~~I~lPpLReR~eDI~~  320 (469)
T PRK10923        268 APVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR  320 (469)
T ss_pred             CEEEECCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHH
T ss_conf             51221437997078799998660817799998644240158465446534999