HHsearch alignment for GI: 254780217 and conserved domain: PRK11131

>PRK11131 ATP-dependent RNA helicase HrpA; Provisional.
Probab=94.68  E-value=0.22  Score=30.80  Aligned_cols=34  Identities=21%  Similarity=0.309  Sum_probs=23.6

Q ss_pred             HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf             9999999982889816631179898889999999999817
Q gi|254780217|r   21 EKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQ   60 (347)
Q Consensus        21 ~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc   60 (347)
T Consensus        79 r~~i~~~i~~nqV---vii~GeTGsGKTTQ---iPq~~le  112 (1295)
T PRK11131         79 KQDILEAIRDHQV---VIVAGETGSGKTTQ---LPKICLE  112 (1295)
T ss_pred             HHHHHHHHHHCCE---EEEECCCCCCHHHH---HHHHHHH
T ss_conf             9999999997996---99976899987889---9999996