HHsearch alignment for GI: 254780217 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=97.94 E-value=0.0021 Score=47.10 Aligned_cols=157 Identities=20% Similarity=0.275 Sum_probs=98.9
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHH
Q ss_conf 16631179898889999999999817799886431210126788679999678987545300100010134212323788
Q gi|254780217|r 35 HALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDE 114 (347)
Q Consensus 35 ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~ 114 (347)
T Consensus 142 NPLfIyG~~GlGKTHLL~AIgn~i~~-~--------------------------~~kV~Yvtae~--F~~-----~~v~a 187 (455)
T PRK12422 142 NPIYLFGPEGSGKTHLMQAAVSALRE-S--------------------------GGKILYVSSEL--FTE-----HLVSA 187 (455)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHC-C--------------------------CCEEEEECHHH--HHH-----HHHHH
T ss_conf 87588789999789999999998537-9--------------------------98699974999--999-----99999
Q ss_pred HHH--HHHHCCCCCCCCCCHHHHHHHHHHCC--HHHHHHHHHHHHHCC-CCCCEEEEECCCCC----CCHHHHCEE---E
Q ss_conf 755--44310222111121035322055424--000145677766303-43416765044335----730252036---9
Q gi|254780217|r 115 IRR--IRYFLSLTANTGYWRVIMIDPVDGMN--RNAANALLKSLEEPP-QKVLFILISHASPT----ILSTIRSRC---L 182 (347)
Q Consensus 115 IR~--l~~~~~~~~~~~~~Ki~IId~ad~ln--~~AaNALLK~LEEPp-~~t~fiLit~~~~~----il~TI~SRc---~ 182 (347)
T Consensus 188 i~~~~~~~Fr~~--yr-~~DvLLIDDIQfl~gK~~tqeEff~tfN~L~~~~KQIVitsDr~P~el~~l~~RL~SRf~~GL 264 (455)
T PRK12422 188 IRSGEMQRFRSF--YR-NVDALFIEDIEVFSGKGATQEEFFHTFNSLHTEGKLIVISSSYAPGDLKAMEERLISRFEWGI 264 (455)
T ss_pred HHCCCHHHHHHH--HH-CCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCE
T ss_conf 975889999999--96-388776314788728488999999999999985996999689895765126899998863761
Q ss_pred EEECCCCCHHHHHHHHHH----HCCCCCHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 886479998999999997----2788896789999997598978999881
Q gi|254780217|r 183 SIKFNSLSENNLYKALEQ----LKIMGWDSKRDFVKIAAYGSVARAIKIL 228 (347)
Q Consensus 183 ~i~f~~l~~~~~~~~L~~----~~~~~~~~~~~~~~~~s~Gs~~~A~~ll 228 (347)
T Consensus 265 ~v~I~~Pd~etr~~Il~~k~~~~~~~l~~ev~~~iA~~i~~niReLeGal 314 (455)
T PRK12422 265 AIPIHPLTREGLRSFLMRQAEQLSIRIEETALDFLIQALSSNVKTLLHAL 314 (455)
T ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32168999899999999999871888844689999999755179999999