HHsearch alignment for GI: 254780217 and conserved domain: PRK12422

>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=97.94  E-value=0.0021  Score=47.10  Aligned_cols=157  Identities=20%  Similarity=0.275  Sum_probs=98.9

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHH
Q ss_conf             16631179898889999999999817799886431210126788679999678987545300100010134212323788
Q gi|254780217|r   35 HALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDE  114 (347)
Q Consensus        35 ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~  114 (347)
T Consensus       142 NPLfIyG~~GlGKTHLL~AIgn~i~~-~--------------------------~~kV~Yvtae~--F~~-----~~v~a  187 (455)
T PRK12422        142 NPIYLFGPEGSGKTHLMQAAVSALRE-S--------------------------GGKILYVSSEL--FTE-----HLVSA  187 (455)
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHC-C--------------------------CCEEEEECHHH--HHH-----HHHHH
T ss_conf             87588789999789999999998537-9--------------------------98699974999--999-----99999


Q ss_pred             HHH--HHHHCCCCCCCCCCHHHHHHHHHHCC--HHHHHHHHHHHHHCC-CCCCEEEEECCCCC----CCHHHHCEE---E
Q ss_conf             755--44310222111121035322055424--000145677766303-43416765044335----730252036---9
Q gi|254780217|r  115 IRR--IRYFLSLTANTGYWRVIMIDPVDGMN--RNAANALLKSLEEPP-QKVLFILISHASPT----ILSTIRSRC---L  182 (347)
Q Consensus       115 IR~--l~~~~~~~~~~~~~Ki~IId~ad~ln--~~AaNALLK~LEEPp-~~t~fiLit~~~~~----il~TI~SRc---~  182 (347)
T Consensus       188 i~~~~~~~Fr~~--yr-~~DvLLIDDIQfl~gK~~tqeEff~tfN~L~~~~KQIVitsDr~P~el~~l~~RL~SRf~~GL  264 (455)
T PRK12422        188 IRSGEMQRFRSF--YR-NVDALFIEDIEVFSGKGATQEEFFHTFNSLHTEGKLIVISSSYAPGDLKAMEERLISRFEWGI  264 (455)
T ss_pred             HHCCCHHHHHHH--HH-CCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCE
T ss_conf             975889999999--96-388776314788728488999999999999985996999689895765126899998863761


Q ss_pred             EEECCCCCHHHHHHHHHH----HCCCCCHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             886479998999999997----2788896789999997598978999881
Q gi|254780217|r  183 SIKFNSLSENNLYKALEQ----LKIMGWDSKRDFVKIAAYGSVARAIKIL  228 (347)
Q Consensus       183 ~i~f~~l~~~~~~~~L~~----~~~~~~~~~~~~~~~~s~Gs~~~A~~ll  228 (347)
T Consensus       265 ~v~I~~Pd~etr~~Il~~k~~~~~~~l~~ev~~~iA~~i~~niReLeGal  314 (455)
T PRK12422        265 AIPIHPLTREGLRSFLMRQAEQLSIRIEETALDFLIQALSSNVKTLLHAL  314 (455)
T ss_pred             EECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             32168999899999999999871888844689999999755179999999