HHsearch alignment for GI: 254780217 and conserved domain: TIGR02881
>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=98.24 E-value=1.7e-05 Score=63.96 Aligned_cols=159 Identities=20% Similarity=0.327 Sum_probs=108.6
Q ss_pred CCHHHHCCHHHHHHHHHHHHHC--------------C-CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf 7565610929999999999982--------------8-898166311798988899999999998177998864312101
Q gi|254780217|r 9 VYNQRLFGHEDIEKFLSQYYCS--------------G-RMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCN 73 (347)
Q Consensus 9 ~~~~~i~G~~~~~~~L~~~~~~--------------~-~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~ 73 (347)
T Consensus 3 ~EL~~~vGL~~vK~~i~EiYA~i~i~~kR~~~GLk~~~~~LH-MiFKGNPGTGKTTVAR~~gklf~-------------- 67 (261)
T TIGR02881 3 RELSRLVGLDEVKELIKEIYAWIQINEKRKEEGLKTSKQVLH-MIFKGNPGTGKTTVARLLGKLFK-------------- 67 (261)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE-EEEECCCCCCHHHHHHHHHHHHH--------------
T ss_conf 235640488899999999999999988887510114884478-77427866843899999999985--------------
Q ss_pred CCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC--------HH
Q ss_conf 2678867999967898754530010001013421232378875544310222111121035322055424--------00
Q gi|254780217|r 74 PDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMN--------RN 145 (347)
Q Consensus 74 ~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln--------~~ 145 (347)
T Consensus 68 ---------emnvL~KGH~iE~ERAD-LVGEYIGH--TAqkTRe~~kk-----A~GG--vLFiDEAYSLaRGGEKDFGKE 128 (261)
T TIGR02881 68 ---------EMNVLSKGHLIEVERAD-LVGEYIGH--TAQKTREVIKK-----ALGG--VLFIDEAYSLARGGEKDFGKE 128 (261)
T ss_pred ---------HCCCCCCCCEEEEEECC-CCCCCCCC--HHHHHHHHHHH-----HCCC--CHHHHHHHHHHCCCCCCCCCH
T ss_conf ---------33756788678876222-12232030--04899999998-----6388--005577777614888876620
Q ss_pred HHHHHHHHHHHCCCCCCEEEEE--C---CCCCCCHHHHCEE-EEEECCCCCHHHHHHHHHHH
Q ss_conf 0145677766303434167650--4---4335730252036-98864799989999999972
Q gi|254780217|r 146 AANALLKSLEEPPQKVLFILIS--H---ASPTILSTIRSRC-LSIKFNSLSENNLYKALEQL 201 (347)
Q Consensus 146 AaNALLK~LEEPp~~t~fiLit--~---~~~~il~TI~SRc-~~i~f~~l~~~~~~~~L~~~ 201 (347)
T Consensus 129 AIDtLVK~mEd~~~~lvlILAGY~~EM~yFL~~NPGL~SRFPi~i~FPdY~~eeL~~Ia~~m 190 (261)
T TIGR02881 129 AIDTLVKAMEDQRNELVLILAGYSDEMDYFLSLNPGLRSRFPISIDFPDYTVEELMEIAERM 190 (261)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
T ss_conf 88899998761569868997087689999862077977766505418899888999999999