HHsearch alignment for GI: 254780217 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=96.06 E-value=0.0093 Score=41.84 Aligned_cols=12 Identities=8% Similarity=-0.017 Sum_probs=4.8
Q ss_pred CCCCCCCHHHHH
Q ss_conf 179898889999
Q gi|254780217|r 40 EGEQGIGKATLG 51 (347)
Q Consensus 40 ~Gp~GiGK~~~A 51 (347)
T Consensus 27 ~~~~G~sl~~l~ 38 (694)
T TIGR03375 27 LEDGRLTPELLP 38 (694)
T ss_pred CCCCCCCHHHHH
T ss_conf 999999999999