HHsearch alignment for GI: 254780217 and conserved domain: cd01123

>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=95.74  E-value=0.049  Score=36.06  Aligned_cols=35  Identities=29%  Similarity=0.287  Sum_probs=23.5

Q ss_pred             HHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf             99999828-898166311798988899999999998
Q gi|254780217|r   24 LSQYYCSG-RMHHALLFEGEQGIGKATLGFRYAGHV   58 (347)
Q Consensus        24 L~~~~~~~-~l~ha~Lf~Gp~GiGK~~~A~~~A~~l   58 (347)
T Consensus         8 lD~~L~GGi~~G~itEi~G~~GsGKTql~lqla~~~   43 (235)
T cd01123           8 LDELLGGGIETGSITEIFGEFGSGKTQLCHQLAVTV   43 (235)
T ss_pred             HHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             996507996478799999999984999999999998