HHsearch alignment for GI: 254780217 and conserved domain: cd01382
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=90.47 E-value=0.47 Score=28.17 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=27.7
Q ss_pred HCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf 82889816631179898889999999999817
Q gi|254780217|r 29 CSGRMHHALLFEGEQGIGKATLGFRYAGHVLQ 60 (347)
Q Consensus 29 ~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc 60 (347)
T Consensus 86 ~~~~~~QsIiiSGESGAGKTestK~il~yL~~ 117 (717)
T cd01382 86 KVLKMSQSIIVSGESGAGKTENTKFVLRYLTE 117 (717)
T ss_pred HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 97199947999668999978999999999863