HHsearch alignment for GI: 254780217 and conserved domain: cd01393

>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=94.71  E-value=0.032  Score=37.52  Aligned_cols=25  Identities=28%  Similarity=0.256  Sum_probs=20.8

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             1663117989888999999999981
Q gi|254780217|r   35 HALLFEGEQGIGKATLGFRYAGHVL   59 (347)
Q Consensus        35 ha~Lf~Gp~GiGK~~~A~~~A~~ll   59 (347)
T Consensus        20 ~ItEi~G~~gsGKT~l~lqla~~~q   44 (226)
T cd01393          20 RITEIFGEFGSGKTQLCLQLAVEAQ   44 (226)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf             3999999999989999999999985