HHsearch alignment for GI: 254780217 and conserved domain: cd01394

>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.
Probab=95.73  E-value=0.02  Score=39.13  Aligned_cols=25  Identities=20%  Similarity=0.284  Sum_probs=21.6

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             1663117989888999999999981
Q gi|254780217|r   35 HALLFEGEQGIGKATLGFRYAGHVL   59 (347)
Q Consensus        35 ha~Lf~Gp~GiGK~~~A~~~A~~ll   59 (347)
T Consensus        20 ~it~i~G~pG~GKStl~lq~a~~~~   44 (218)
T cd01394          20 TVTQVYGPPGTGKTNIAIQLAVETA   44 (218)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf             7999989999849999999999986