HHsearch alignment for GI: 254780217 and conserved domain: cd01394
>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.
Probab=95.73 E-value=0.02 Score=39.13 Aligned_cols=25 Identities=20% Similarity=0.284 Sum_probs=21.6
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 1663117989888999999999981
Q gi|254780217|r 35 HALLFEGEQGIGKATLGFRYAGHVL 59 (347)
Q Consensus 35 ha~Lf~Gp~GiGK~~~A~~~A~~ll 59 (347)
T Consensus 20 ~it~i~G~pG~GKStl~lq~a~~~~ 44 (218)
T cd01394 20 TVTQVYGPPGTGKTNIAIQLAVETA 44 (218)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 7999989999849999999999986