HHsearch alignment for GI: 254780217 and conserved domain: cd03223

>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=95.00  E-value=0.024  Score=38.61  Aligned_cols=41  Identities=15%  Similarity=0.310  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHH-HCCHHHHHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf             121035322055-4240001456777663034341676504433
Q gi|254780217|r  129 GYWRVIMIDPVD-GMNRNAANALLKSLEEPPQKVLFILISHASP  171 (347)
Q Consensus       129 ~~~Ki~IId~ad-~ln~~AaNALLK~LEEPp~~t~fiLit~~~~  171 (347)
T Consensus       108 ~~p~iliLDEpTs~LD~~~~~~l~~~l~~~--~~Tvi~VtH~~~  149 (166)
T cd03223         108 HKPKFVFLDEATSALDEESEDRLYQLLKEL--GITVISVGHRPS  149 (166)
T ss_pred             CCCCEEEECCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCHH
T ss_conf             499999975853328999999999999977--998999943469