HHsearch alignment for GI: 254780217 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=96.39 E-value=0.0037 Score=45.07 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=34.0
Q ss_pred CCHHHHHHHHH-HCCHHHHHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 21035322055-4240001456777663034341676504433
Q gi|254780217|r 130 YWRVIMIDPVD-GMNRNAANALLKSLEEPPQKVLFILISHASP 171 (347)
Q Consensus 130 ~~Ki~IId~ad-~ln~~AaNALLK~LEEPp~~t~fiLit~~~~ 171 (347)
T Consensus 158 ~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~Tvi~itH~~~ 200 (220)
T cd03245 158 DPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPS 200 (220)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 9999999687568898999999999998769998999935988