HHsearch alignment for GI: 254780217 and conserved domain: pfam00493

Probab=97.88  E-value=0.00018  Score=55.61  Aligned_cols=137  Identities=19%  Similarity=0.160  Sum_probs=79.8

Q ss_pred             HHHCCHHHHHHHHHHHHHCCCC------------CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCH
Q ss_conf             5610929999999999982889------------8166311798988899999999998177998864312101267886
Q gi|254780217|r   12 QRLFGHEDIEKFLSQYYCSGRM------------HHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSP   79 (347)
Q Consensus        12 ~~i~G~~~~~~~L~~~~~~~~l------------~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~   79 (347)
T Consensus        24 P~i~G~~~vK~ai~l~l~gg~~~~~~~~~~~Rg~ih-iLLvGdPG~gKSqlLk~~~~-~~---pr~~~tsg~~ss-----   93 (327)
T pfam00493        24 PSIYGHEDVKKAILLQLFGGVKKNLPDGTRLRGDIN-VLLVGDPGTAKSQLLKYVAK-LA---PRAVYTSGKGSS-----   93 (327)
T ss_pred             CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE-EEEECCCCCCHHHHHHHHHH-HC---CCCEEECCCCCC-----
T ss_conf             712498799999999980898765888862036511-89846998156099999998-68---870883177665-----


Q ss_pred             HHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCC-C-CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf             7999967898754530010001013421232378875544310222-1-1112103532205542400014567776630
Q gi|254780217|r   80 FVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLT-A-NTGYWRVIMIDPVDGMNRNAANALLKSLEEP  157 (347)
Q Consensus        80 ~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~-~-~~~~~Ki~IId~ad~ln~~AaNALLK~LEEP  157 (347)
T Consensus        94 ---------~~GLT-a~~~~d~~~---------------~~~~leaGalvlAd~Gv~cIDEfdk~~~~d~saL~EAMEqq  148 (327)
T pfam00493        94 ---------AAGLT-AAVVRDPDT---------------GEWTLEAGALVLADGGVCCIDEFDKMNEEDRVAIHEAMEQQ  148 (327)
T ss_pred             ---------CCCCE-EEEEEECCC---------------CCEEEECCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf             ---------67761-589980688---------------83698368477558982785005558876799999999868


Q ss_pred             CCC------------CCEEEEECCCCC--------------CCHHHHCEEEE
Q ss_conf             343------------416765044335--------------73025203698
Q gi|254780217|r  158 PQK------------VLFILISHASPT--------------ILSTIRSRCLS  183 (347)
Q Consensus       158 p~~------------t~fiLit~~~~~--------------il~TI~SRc~~  183 (347)
T Consensus       149 tVsIaKaGi~~tL~ar~sVlAaaNP~~g~yd~~~~~~~ni~Lp~~lLsRFDL  200 (327)
T pfam00493       149 TISIAKAGIVATLNARCSVLAAANPIFGRYDPKKSVAENINLPPPLLSRFDL  200 (327)
T ss_pred             EEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHCCCCHHHHCCEEE
T ss_conf             1776338538972587179985277677378888988855897677450107