HHsearch alignment for GI: 254780217 and conserved domain: pfam05729
>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=97.28 E-value=0.0024 Score=46.66 Aligned_cols=148 Identities=14% Similarity=0.098 Sum_probs=70.4
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEE-ECCCCHHHCCCCCCCCCHHH
Q ss_conf 66311798988899999999998177998864312101267886799996789875453-00100010134212323788
Q gi|254780217|r 36 ALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLY-LSYSLNPKTGKWRTVITVDE 114 (347)
Q Consensus 36 a~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~-i~~~~~~k~~~~~~~I~vd~ 114 (347)
T Consensus 2 ~i~i~G~aG~GKTtll~kl~~~wa~g~~~~~~~~vf------~~~~r~~~~~~~~sl~~ll~~~~~------~~~~~~~~ 69 (165)
T pfam05729 2 TVILQGEAGSGKTTLLQKLALLWAQGKLPQDFDFVF------FLPCRELSRSGEASLADLLFSQWP------EPAAPVSE 69 (165)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE------EEEHHHHCCCCCCCHHHHHHHHCC------CCCCCHHH
T ss_conf 899982798989999999999998698436972899------999567077766899999998767------74576378
Q ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHH---------HHHHHHHHHHC-CCCCCEEEEECCCCCC--CHHHHCEEE
Q ss_conf 75544310222111121035322055424000---------14567776630-3434167650443357--302520369
Q gi|254780217|r 115 IRRIRYFLSLTANTGYWRVIMIDPVDGMNRNA---------ANALLKSLEEP-PQKVLFILISHASPTI--LSTIRSRCL 182 (347)
Q Consensus 115 IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~A---------aNALLK~LEEP-p~~t~fiLit~~~~~i--l~TI~SRc~ 182 (347)
T Consensus 70 ~~~~~---~---~~~~k~L~ilDGlDE~~~~~~~~~~~~~~~~~l~~ll~~~~lp~~~-vliTsRp~~~~~l~~~~~~~~ 142 (165)
T pfam05729 70 VWAVI---L---ELPERVLLILDGLDELASDLGQLDGPLPVLTLLSSLLRKKLLPGAS-LLLTSRPDALRDLRRGLEEPR 142 (165)
T ss_pred HHHHH---H---HCCCCEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCE-EEEEECCCHHHHHHHHCCCCC
T ss_conf 99999---8---3977289996484551444356444577999999998415278864-999968037988577648871
Q ss_pred EEECCCCCHHHHHHHHHHHC
Q ss_conf 88647999899999999727
Q gi|254780217|r 183 SIKFNSLSENNLYKALEQLK 202 (347)
Q Consensus 183 ~i~f~~l~~~~~~~~L~~~~ 202 (347)
T Consensus 143 ~~ei~GFs~~~~~~yi~~~F 162 (165)
T pfam05729 143 YLEVLGFSEEDRKQYVRKYF 162 (165)
T ss_pred EEEECCCCHHHHHHHHHHHC
T ss_conf 89988999999999999867