HHsearch alignment for GI: 254780217 and conserved domain: pfam06745
>pfam06745 KaiC KaiC. This family represents a conserved region within bacterial and archaeal proteins, most of which are hypothetical. More than one copy is sometimes found in each protein. This family includes KaiC, which is one of the Kai proteins among which direct protein-protein association may be a critical process in the generation of circadian rhythms in cyanobacteria.
Probab=93.61 E-value=0.065 Score=35.06 Aligned_cols=24 Identities=25% Similarity=0.565 Sum_probs=20.7
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 816631179898889999999999
Q gi|254780217|r 34 HHALLFEGEQGIGKATLGFRYAGH 57 (347)
Q Consensus 34 ~ha~Lf~Gp~GiGK~~~A~~~A~~ 57 (347)
T Consensus 19 gs~~LI~G~pGsGKT~la~qfl~~ 42 (231)
T pfam06745 19 GRVVLITGGPGTGKTIFGLQFLYN 42 (231)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 969999858972599999999999