BLAST/PSIBLAST alignment of GI: 254780217 and GI: 209549398 at iteration 1
>gi|209549398|ref|YP_002281315.1| DNA polymerase III subunit delta' [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341
>gi|209535154|gb|ACI55089.1| DNA-directed DNA polymerase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 217/335 (64%), Gaps = 4/335 (1%)
Query: 1 MIDRAFDPVYNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQ 60
++D A P N RLFGHE+ + FL+Q Y SG+ HHA+L EG +GIGKATL FR+A HVL
Sbjct: 8 LLDGAIWPGENTRLFGHEEAQAFLAQSYRSGKGHHAILIEGPEGIGKATLAFRFANHVLS 67
Query: 61 NPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRY 120
PD + AP + +PDP S +Q+ S A H+ L+L+ ++ KTGK ++ ITVDE+RR
Sbjct: 68 YPDPATAPETIGDPDPASSVSRQINSGASHNLLHLARPVDEKTGKVKSAITVDEVRRAGK 127
Query: 121 FLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILISHASPTILSTIRSR 180
F S T+ TG WR+++IDP D MNRNAANA+LK LEEPP++ LF+++SHA +L TIRSR
Sbjct: 128 FFSQTSGTGNWRIVIIDPADDMNRNAANAILKILEEPPKRALFLVLSHAPGRLLPTIRSR 187
Query: 181 CLSIKFNSLSENNLYKALEQLKIMGWDSKRDFVKIAAYGSVARAIKILHYDCDKIISSYI 240
CL +K L+++ L AL L I G + V AA GSV A+K+L+Y +II++Y
Sbjct: 188 CLPLKLAPLADDALMAALAHLGISG---EGGAVLSAAKGSVGEALKLLNYGGGEIIAAYD 244
Query: 241 DLIHIPRQEYALQKMQQIADELLSQDQKIAFDFLIEFILKEICKSAKAAALSGQLEEADQ 300
+++ A + M ++AD L ++ FDF + + +I A+AAA GQ+ A++
Sbjct: 245 EMLSA-EGPTARKAMHRLADALSGKESDTIFDFFVSHVGDDIMNRARAAAGEGQIAAAER 303
Query: 301 IAQIYFSLVKRVHAFSMYNLDRRQMIFHLLSKARE 335
+A++Y + +R+ YNLDR+Q I +L+ ++
Sbjct: 304 LARLYSEITERLTISDAYNLDRKQTIIGILADIKQ 338