HHsearch alignment for GI: 254780218 and conserved domain: COG0178

>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair].

Probab=94.82  E-value=0.035  Score=33.32  Aligned_cols=25  Identities=40%  Similarity=0.646  Sum_probs=17.8

Q ss_pred             CCEEEEECCCCCCHHHHHHH-HHHHH
Q ss_conf             86899867888797999999-99999
Q gi|254780218|r    4 GLFISFEGIEGAGKTTHISL-LKRFL   28 (225)
Q Consensus         4 g~~I~iEGiDGsGKsTq~~~-L~~~L   28 (225)
T Consensus       627 g~~t~VTGVSGSGKSTLIn~tL~~a~  652 (935)
T COG0178         627 GVFTCVTGVSGSGKSTLINDTLVPAL  652 (935)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             63799983687877786999999999