HHsearch alignment for GI: 254780218 and conserved domain: COG1936
>COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism].
Probab=98.98 E-value=2e-08 Score=70.57 Aligned_cols=155 Identities=22% Similarity=0.294 Sum_probs=86.2
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68998678887979999999999997798199987788984410011001244454101345677788999997763565
Q gi|254780218|r 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIR 84 (225)
Q Consensus 5 ~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I~ 84 (225)
T Consensus 1 m~I~ITGTPGvGKTT~~~~L~----~lg~~~i~l--------~el~~e~~~---~~~~de~r~s~~vD~d---~~~~~le 62 (180)
T COG1936 1 MLIAITGTPGVGKTTVCKLLR----ELGYKVIEL--------NELAKENGL---YTEYDELRKSVIVDVD---KLRKRLE 62 (180)
T ss_pred CEEEEECCCCCCHHHHHHHHH----HHCCCEEEH--------HHHHHHCCC---EECCCCCCCEEEEEHH---HHHHHHH
T ss_conf 937993799986687999999----829846619--------999986697---1143776615886679---9998888
Q ss_pred HHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 54234525872354243100010034442457765444203889841156652034877644321111100000000211
Q gi|254780218|r 85 PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 (225)
Q Consensus 85 p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E~ 164 (225)
T Consensus 63 ~~~~~~~~I-vd~H----~~--------------------hl~~~~dlVvVLR~~p~~L~~RLk~RGy~~eKI----~EN 113 (180)
T COG1936 63 ELLREGSGI-VDSH----LS--------------------HLLPDCDLVVVLRADPEVLYERLKGRGYSEEKI----LEN 113 (180)
T ss_pred HHHCCCCEE-EECH----HH--------------------HCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHH----HHH
T ss_conf 875058847-6126----66--------------------217878889997189899999998769987898----877
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCHHHHHHHHHHHHHH
Q ss_conf 2889999999999999997899499981-897889999999999999
Q gi|254780218|r 165 KDVMIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWE 210 (225)
Q Consensus 165 ~~~~~~~kv~~~y~~la~~~~~~~~~ID-a~~~~eei~~~I~~~i~~ 210 (225)
T Consensus 114 veAEi~~---vi~~EA~E~~-~~v~evdtt~~s~ee~~~~i~~ii~~ 156 (180)
T COG1936 114 VEAEILD---VILIEAVERF-EAVIEVDTTNRSPEEVAEEIIDIIGG 156 (180)
T ss_pred HHHHHHH---HHHHHHHHHC-CCEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 9999999---9999999734-76499978999999999999999703