HHsearch alignment for GI: 254780218 and conserved domain: KOG3062
>KOG3062 consensus.
Probab=98.40 E-value=1.9e-05 Score=52.81 Aligned_cols=163 Identities=15% Similarity=0.185 Sum_probs=85.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89986788879799999999999977981-99987788984410011001244454101345677788999997763565
Q gi|254780218|r 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIR 84 (225)
Q Consensus 6 ~I~iEGiDGsGKsTq~~~L~~~L~~~g~~-v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I~ 84 (225)
T Consensus 3 LVvi~G~P~SGKstrA~~L~~~l~~~~~K~~v~ii~d--eslg------~~-~ns~y~~s~~EK----~lRg~L~S~-v~ 68 (281)
T KOG3062 3 LVVICGLPCSGKSTRAVELREALKERGTKQSVRIIDD--ESLG------IE-KNSNYGDSQAEK----ALRGKLRSA-VD 68 (281)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECH--HHCC------CC-CCCCCCCCHHHH----HHHHHHHHH-HH
T ss_conf 6999378888820679999999986255514999541--3217------88-742224457788----889989999-98
Q ss_pred HHHCCCCEEEECCCCC-CCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 5423452587235424-310001003444245776544420388984115665203487764432111110000000021
Q gi|254780218|r 85 PALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 (225)
Q Consensus 85 p~L~~g~iVI~DRy~~-S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E 163 (225)
T Consensus 69 R~Lsk~~iVI~DslNyIKGfRYeLyC----------~ak~~---~tt~Cvv~t~vp~e~~r~~Ns~~~~p~e~g----y- 130 (281)
T KOG3062 69 RSLSKGDIVIVDSLNYIKGFRYELYC----------EAKAA---RTTYCVVHTAVPQELCREWNSEREDPGEDG----Y- 130 (281)
T ss_pred HHCCCCCEEEEECCCCCCCCEEEEEE----------EHHCC---CEEEEEEEECCCHHHHHHHCCCCCCCCCCC----C-
T ss_conf 53356868998144411220203655----------10105---446899985279899987514689988899----9-
Q ss_pred HCCHHHHHHHHHHHHHHHHHCCCCE-----EEE--CCCCCHHHHHHHH
Q ss_conf 1288999999999999999789949-----998--1897889999999
Q gi|254780218|r 164 RKDVMIHEKRRQIFLDIARNQPDRC-----HIV--DSAHSFQSVATNI 204 (225)
Q Consensus 164 ~~~~~~~~kv~~~y~~la~~~~~~~-----~~I--Da~~~~eei~~~I 204 (225)
T Consensus 131 --~~e~le~L~~RyEeP--~s~NRWDsPLf~ll~~~~~~~~~~I~~al 174 (281)
T KOG3062 131 --DDELLEALVQRYEEP--NSRNRWDSPLFTLLPDVITLPIDDILKAL 174 (281)
T ss_pred --CHHHHHHHHHHHHCC--CCCCCCCCCCEEEECCCCCCCHHHHHHHH
T ss_conf --979999999986187--75566668615772465778689999998