HHsearch alignment for GI: 254780218 and conserved domain: KOG3078
>KOG3078 consensus.
Probab=97.93 E-value=0.0002 Score=46.63 Aligned_cols=185 Identities=18% Similarity=0.205 Sum_probs=96.9
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH--
Q ss_conf 886899867888797999999999999779819998778898441001100124445410134567778899999776--
Q gi|254780218|r 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVE-- 80 (225)
Q Consensus 3 ~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~-- 80 (225)
T Consensus 14 ~~~~~v~~G~pg~gkgt~a~~l~~~~~~~h-----------l~tGdllr~~ia~~--telg~~~~~~---~~~g~lvpDe 77 (235)
T KOG3078 14 KGVRAVLLGAPGSGKGTQAPRLTKNFGVIH-----------ISTGDLLRDEIASG--TELGKEAKEA---IDKGKLVPDE 77 (235)
T ss_pred CCEEEEEEECCCCCCCCCCHHHHHHCCCCC-----------CHHHHHHHHHHHCC--CCHHHHHHHH---HHHCCCCCHH
T ss_conf 464799971899997743779998447750-----------03478899998515--8178999999---9732767599
Q ss_pred ---HHHHHHHCCC---CEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf ---3565542345---2587235424310001003444245776544420388984115665203487764432111110
Q gi|254780218|r 81 ---NVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 (225)
Q Consensus 81 ---~~I~p~L~~g---~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~ 154 (225)
T Consensus 78 iv~~~l~~~l~~~~~~~~~ildg~----------Prt~~q--a~~l~~---~~~~~d~Vi~l~vp~~~L~~ri~~r~ihp 142 (235)
T KOG3078 78 VVVRLLEKRLENPRCQKGFILDGF----------PRTVQQ--AEELLD---RIAQIDLVINLKVPEEVLVDRITGRRIHP 142 (235)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCC----------CCCHHH--HHHHHH---CCCCCCEEEEECCCHHHHHHHHHCCCCCC
T ss_conf 999999860256422256004788----------863488--999997---06883337884388899999975023357
Q ss_pred HCCH-------------HHH-----HHHCCHH---HHHHHHHHHHHHH----HHC--CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 0000-------------000-----2112889---9999999999999----978--99499981897889999999999
Q gi|254780218|r 155 ESAC-------------LDY-----FERKDVM---IHEKRRQIFLDIA----RNQ--PDRCHIVDSAHSFQSVATNILNI 207 (225)
Q Consensus 155 ~~~~-------------~d~-----~E~~~~~---~~~kv~~~y~~la----~~~--~~~~~~IDa~~~~eei~~~I~~~ 207 (225)
T Consensus 143 ~sG~~Yh~~~~pPk~~~~dDitgepL~qr~dD~~e~v~~rL~~y~~~~~pv~eyY~k~~~l~~~~~~~-~~~v~~~v~~~ 221 (235)
T KOG3078 143 ASGRVYHLEFNPPKVPGKDDITGEPLIQREDDKPEVVKKRLKAYKEQTKPVLEYYKKKGVLIEFSGEK-PEEVFPNVYAF 221 (235)
T ss_pred CCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCC-HHHHHHHHHHH
T ss_conf 53320010026976556111234733328555699999999998640367999998557255316863-25757999999
Q ss_pred HHHHHHHHCCCC
Q ss_conf 999998642645
Q gi|254780218|r 208 VWELVQKRVSPL 219 (225)
Q Consensus 208 i~~~l~k~~~~~ 219 (225)
T Consensus 222 l~~~~~~~~~~~ 233 (235)
T KOG3078 222 LSKKVPEREQKE 233 (235)
T ss_pred HHHHHHHHHHHC
T ss_conf 876525544312