HHsearch alignment for GI: 254780218 and conserved domain: PRK00091

>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.
Probab=96.81  E-value=0.025  Score=34.21  Aligned_cols=81  Identities=12%  Similarity=0.103  Sum_probs=49.7

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHCCH-----HH-HHHH-HHHHHHHHHHCCCCEEEECCCCCHHHHHHH
Q ss_conf             1156652034877644321111100000000211288-----99-9999-999999999789949998189788999999
Q gi|254780218|r  131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-----MI-HEKR-RQIFLDIARNQPDRCHIVDSAHSFQSVATN  203 (225)
Q Consensus       131 Dl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E~~~~-----~~-~~kv-~~~y~~la~~~~~~~~~IDa~~~~eei~~~  203 (225)
T Consensus       191 ~~~i~L~~~r~~L~~rI~~R~~~Mi~~Glie-Ev~~L~~~~~~~~~~~~~aIGykE~~~-------yL~g~~s~~e~~~~  262 (304)
T PRK00091        191 VLIIGLDPDREVLYERINQRFDQMLEEGLLE-EVRALLAGGLHPDLPAMRAIGYREVWE-------YLDGEISLEEAVEK  262 (304)
T ss_pred             EEEEEECCCHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHCCCCCCHHHHHCCCHHHHHH-------HHCCCCCHHHHHHH
T ss_conf             2899968999999999999999999868999-999999769973046773438999999-------98699999999999


Q ss_pred             HHHHHHHHHHHHCCCC
Q ss_conf             9999999998642645
Q gi|254780218|r  204 ILNIVWELVQKRVSPL  219 (225)
Q Consensus       204 I~~~i~~~l~k~~~~~  219 (225)
T Consensus       263 i~~~Tr~yAKRQ~TWf  278 (304)
T PRK00091        263 IKQATRQYAKRQLTWF  278 (304)
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9999999999999972