HHsearch alignment for GI: 254780218 and conserved domain: PRK00091
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.
Probab=96.81 E-value=0.025 Score=34.21 Aligned_cols=81 Identities=12% Similarity=0.103 Sum_probs=49.7
Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHCCH-----HH-HHHH-HHHHHHHHHHCCCCEEEECCCCCHHHHHHH
Q ss_conf 1156652034877644321111100000000211288-----99-9999-999999999789949998189788999999
Q gi|254780218|r 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-----MI-HEKR-RQIFLDIARNQPDRCHIVDSAHSFQSVATN 203 (225)
Q Consensus 131 Dl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E~~~~-----~~-~~kv-~~~y~~la~~~~~~~~~IDa~~~~eei~~~ 203 (225)
T Consensus 191 ~~~i~L~~~r~~L~~rI~~R~~~Mi~~Glie-Ev~~L~~~~~~~~~~~~~aIGykE~~~-------yL~g~~s~~e~~~~ 262 (304)
T PRK00091 191 VLIIGLDPDREVLYERINQRFDQMLEEGLLE-EVRALLAGGLHPDLPAMRAIGYREVWE-------YLDGEISLEEAVEK 262 (304)
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHCCCCCCHHHHHCCCHHHHHH-------HHCCCCCHHHHHHH
T ss_conf 2899968999999999999999999868999-999999769973046773438999999-------98699999999999
Q ss_pred HHHHHHHHHHHHCCCC
Q ss_conf 9999999998642645
Q gi|254780218|r 204 ILNIVWELVQKRVSPL 219 (225)
Q Consensus 204 I~~~i~~~l~k~~~~~ 219 (225)
T Consensus 263 i~~~Tr~yAKRQ~TWf 278 (304)
T PRK00091 263 IKQATRQYAKRQLTWF 278 (304)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999972