HHsearch alignment for GI: 254780218 and conserved domain: PRK00625

>PRK00625 shikimate kinase; Provisional.
Probab=98.92  E-value=1.3e-07  Score=65.79  Aligned_cols=165  Identities=17%  Similarity=0.152  Sum_probs=78.6

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC----CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             6899867888797999999999999779819998778----898441001100124445410134567778899999776
Q gi|254780218|r    5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP----GGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVE   80 (225)
Q Consensus         5 ~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP----~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~   80 (225)
T Consensus         1 MnI~LIG~mGsGKStiGk~LA~~l---~~~FvD~D~~Ie~~~~~~i~~Si~eIf~--------~~GE~~-F---R~-~E~   64 (173)
T PRK00625          1 MQIFLCGLPTVGKTSFGKALAKFL---SLPFFDTDDLIVSNYHGALYSSPKEIYQ--------AYGEEG-F---CE-EEA   64 (173)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHH---CCCEEECHHHHHHHHCCCCCCCHHHHHH--------HHCHHH-H---HH-HHH
T ss_conf             929998999998899999999993---9995774999999868652356999999--------718999-9---99-999


Q ss_pred             HHHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             35655423452587235424310001003444245776544420388984115665203487764432111110000000
Q gi|254780218|r   81 NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD  160 (225)
Q Consensus        81 ~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d  160 (225)
T Consensus        65 ~~l~-~l~~~~~VI------st----GGG~v~~~~n~~~Lk~~-------g~vV~L~~~~e~i~~Rl~~rpl~~~~~~~~  126 (173)
T PRK00625         65 LALE-SLPVIPSIV------AL----GGGTLMHEESYDHIRNR-------GLLVLLSLPIATIYQRLQKRGLPERLKKTP  126 (173)
T ss_pred             HHHH-HHCCCCCEE------EC----CCCCCCCHHHHHHHHHC-------CEEEEEECCHHHHHHHHHCCCCCCCCCCHH
T ss_conf             9999-732489689------74----88501789999999968-------999998399999999982699877788357


Q ss_pred             HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             02112889999999999999997899499981897889999999999999998
Q gi|254780218|r  161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ  213 (225)
Q Consensus       161 ~~E~~~~~~~~kv~~~y~~la~~~~~~~~~IDa~~~~eei~~~I~~~i~~~l~  213 (225)
T Consensus       127 ~l~----~l~~eR~~lY~~~AD------~iI~~d~~sit~~~~~~~~~~~~~~  169 (173)
T PRK00625        127 SLE----EILTQRIDRMREIAD------YIFSLDHVALTSESSLMSACQSFCT  169 (173)
T ss_pred             HHH----HHHHHHHHHHHHHCC------EEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             999----999999999999799------9996899761325449999999999