HHsearch alignment for GI: 254780218 and conserved domain: PRK05439
>PRK05439 pantothenate kinase; Provisional.
Probab=96.56 E-value=0.063 Score=31.76 Aligned_cols=187 Identities=20% Similarity=0.224 Sum_probs=88.8
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCC--CCCCCHHHHCCCCCCCCCCHHHHHHH-HHHHHHH
Q ss_conf 888689986788879799999999999977--981999877889--84410011001244454101345677-7889999
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGG--TPAAEAARHVLLSCGVDEFGAEAEAI-VFAAARL 76 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~--g~~v~~~~eP~~--t~~ge~ir~~l~~~~~~~~~~~~~~l-Lfaadr~ 76 (225)
T Consensus 84 ~~PfIIGIaGSVAVGKSTtARlLq~LL~r~~~~~~V~LvTT-DGFLypNa~L~~rglm~RKGFPESYD~~~Ll~Fl~~-- 160 (312)
T PRK05439 84 KVPFIIGIAGSVAVGKSTTARLLQALLSRWPEHPKVDLVTT-DGFLYPNAELKERGLMKRKGFPESYDMRALLRFLSD-- 160 (312)
T ss_pred CCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEC-CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH--
T ss_conf 99989997620102628899999999950789994589934-665578689987677124789854479999999999--
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCEEHHCCC---CCC---CHHHHHHHHHHHCC---C------CCCCEEEEEEECHH
Q ss_conf 977635655423452587235424310001003---444---24577654442038---8------98411566520348
Q gi|254780218|r 77 DHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSS---QHLFLDSLQEISVQ---E------VMPDCTIILDLPVD 141 (225)
Q Consensus 77 ~~~~~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~---~~~---~~~~i~~l~~~~~~---~------~~PDl~i~Ldv~~e 141 (225)
T Consensus 161 ----------vKsG~~~-v~aPvYSH~~YDIvp~~~~~v~~PDILIvEGlNvLQ~~~~~~~~~~vSDffDfSIYvDA~~~ 229 (312)
T PRK05439 161 ----------VKSGKPN-VKAPVYSHLIYDIVPGEYQTVDQPDILIVEGLNVLQTGDDDNHRLFVSDFFDFSIYVDADED 229 (312)
T ss_pred ----------HHCCCCC-CCCEEECHHHHHCCCCCEEEECCCCEEEEECHHHCCCCCCCCCCCCCCCCEEEEEEEECCHH
T ss_conf ----------9769987-66403336776427997069737998999151214479767886552243138999608888
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH---HHHHHHHHHHH-HHHHHHCC
Q ss_conf 776443211111000000002112889999999999999997899499981897889---99999999999-99986426
Q gi|254780218|r 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ---SVATNILNIVW-ELVQKRVS 217 (225)
Q Consensus 142 ~a~~Ri~~R~~~~~~~~~d~~E~~~~~~~~kv~~~y~~la~~~~~~~~~IDa~~~~e---ei~~~I~~~i~-~~l~k~~~ 217 (225)
T Consensus 230 ~Ie~WY-----------i~RFl------------~L~~tAf~dp~syF~~ya~l~~~ea~~~A~~iW~~INl~NL~enIl 286 (312)
T PRK05439 230 LIEKWY-----------IERFL------------KLRETAFSDPDSYFHRYAKLSEEEAIAIARQIWKTINLPNLEENIL 286 (312)
T ss_pred HHHHHH-----------HHHHH------------HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHCC
T ss_conf 999999-----------99999------------9999886094668898717999999999999999717451787668
Q ss_pred CCCCCCCC
Q ss_conf 45454679
Q gi|254780218|r 218 PLSSKKDI 225 (225)
Q Consensus 218 ~~~~~~~~ 225 (225)
T Consensus 287 PTr~RA~l 294 (312)
T PRK05439 287 PTRERADL 294 (312)
T ss_pred CCCCCCCE
T ss_conf 75100228