HHsearch alignment for GI: 254780218 and conserved domain: PRK05439

>PRK05439 pantothenate kinase; Provisional.
Probab=96.56  E-value=0.063  Score=31.76  Aligned_cols=187  Identities=20%  Similarity=0.224  Sum_probs=88.8

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCC--CCCCCHHHHCCCCCCCCCCHHHHHHH-HHHHHHH
Q ss_conf             888689986788879799999999999977--981999877889--84410011001244454101345677-7889999
Q gi|254780218|r    2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGG--TPAAEAARHVLLSCGVDEFGAEAEAI-VFAAARL   76 (225)
Q Consensus         2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~--g~~v~~~~eP~~--t~~ge~ir~~l~~~~~~~~~~~~~~l-Lfaadr~   76 (225)
T Consensus        84 ~~PfIIGIaGSVAVGKSTtARlLq~LL~r~~~~~~V~LvTT-DGFLypNa~L~~rglm~RKGFPESYD~~~Ll~Fl~~--  160 (312)
T PRK05439         84 KVPFIIGIAGSVAVGKSTTARLLQALLSRWPEHPKVDLVTT-DGFLYPNAELKERGLMKRKGFPESYDMRALLRFLSD--  160 (312)
T ss_pred             CCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEC-CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH--
T ss_conf             99989997620102628899999999950789994589934-665578689987677124789854479999999999--


Q ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCCEEHHCCC---CCC---CHHHHHHHHHHHCC---C------CCCCEEEEEEECHH
Q ss_conf             977635655423452587235424310001003---444---24577654442038---8------98411566520348
Q gi|254780218|r   77 DHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSS---QHLFLDSLQEISVQ---E------VMPDCTIILDLPVD  141 (225)
Q Consensus        77 ~~~~~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~---~~~---~~~~i~~l~~~~~~---~------~~PDl~i~Ldv~~e  141 (225)
T Consensus       161 ----------vKsG~~~-v~aPvYSH~~YDIvp~~~~~v~~PDILIvEGlNvLQ~~~~~~~~~~vSDffDfSIYvDA~~~  229 (312)
T PRK05439        161 ----------VKSGKPN-VKAPVYSHLIYDIVPGEYQTVDQPDILIVEGLNVLQTGDDDNHRLFVSDFFDFSIYVDADED  229 (312)
T ss_pred             ----------HHCCCCC-CCCEEECHHHHHCCCCCEEEECCCCEEEEECHHHCCCCCCCCCCCCCCCCEEEEEEEECCHH
T ss_conf             ----------9769987-66403336776427997069737998999151214479767886552243138999608888


Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH---HHHHHHHHHHH-HHHHHHCC
Q ss_conf             776443211111000000002112889999999999999997899499981897889---99999999999-99986426
Q gi|254780218|r  142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ---SVATNILNIVW-ELVQKRVS  217 (225)
Q Consensus       142 ~a~~Ri~~R~~~~~~~~~d~~E~~~~~~~~kv~~~y~~la~~~~~~~~~IDa~~~~e---ei~~~I~~~i~-~~l~k~~~  217 (225)
T Consensus       230 ~Ie~WY-----------i~RFl------------~L~~tAf~dp~syF~~ya~l~~~ea~~~A~~iW~~INl~NL~enIl  286 (312)
T PRK05439        230 LIEKWY-----------IERFL------------KLRETAFSDPDSYFHRYAKLSEEEAIAIARQIWKTINLPNLEENIL  286 (312)
T ss_pred             HHHHHH-----------HHHHH------------HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHCC
T ss_conf             999999-----------99999------------9999886094668898717999999999999999717451787668


Q ss_pred             CCCCCCCC
Q ss_conf             45454679
Q gi|254780218|r  218 PLSSKKDI  225 (225)
Q Consensus       218 ~~~~~~~~  225 (225)
T Consensus       287 PTr~RA~l  294 (312)
T PRK05439        287 PTRERADL  294 (312)
T ss_pred             CCCCCCCE
T ss_conf             75100228