HHsearch alignment for GI: 254780218 and conserved domain: PRK06547
>PRK06547 hypothetical protein; Provisional.
Probab=98.41 E-value=1.2e-06 Score=59.91 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=66.8
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68998678887979999999999997798199987788984410011001244454101345677788999997763565
Q gi|254780218|r 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIR 84 (225)
Q Consensus 5 ~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I~ 84 (225)
T Consensus 16 ~iVaIDG~sGaGKTTLA~~La~~~~--~~~vvHmD------------D~Y-~GW-~gl~-------~~~~~--l~~~VL~ 70 (184)
T PRK06547 16 ITVLIDGRSGSGKTTLAGELAACWE--GSQLVHLD------------DLY-PGW-DGLA-------AASEH--VREALLD 70 (184)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC--CCCEEEEC------------CCC-CCC-CCCH-------HHHHH--HHHHHHH
T ss_conf 9999868998888999999997457--98289705------------777-776-5404-------68999--9999864
Q ss_pred HHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHC----CCCCCCEEEEEEECHHHHHHHHHHHHH
Q ss_conf 54234525872354243100010034442457765444203----889841156652034877644321111
Q gi|254780218|r 85 PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV----QEVMPDCTIILDLPVDIGLKRVQNRYS 152 (225)
Q Consensus 85 p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~----~~~~PDl~i~Ldv~~e~a~~Ri~~R~~ 152 (225)
T Consensus 71 P-l~~G~~~~yr~~DW~~~~~~~~-~~v~~~~~lIvEGvga~~~~~r~~~d~~IWve~~~~~r~~R~l~RDG 140 (184)
T PRK06547 71 P-RALGRPGRWRRWDWANNCPGGW-VTVEPGRRLIIEGVGALTAANRALADLTVWLEGPEALRKQRALTRDP 140 (184)
T ss_pred H-HCCCCCCEEECCCCCCCCCCCC-EECCCCCCEEEECCCCCCHHHCCCCCEEEEEECCHHHHHHHHHHCCC
T ss_conf 6-4189973660621578997875-67378881899662315631314123777774898999999986095