HHsearch alignment for GI: 254780218 and conserved domain: PRK11131

>PRK11131 ATP-dependent RNA helicase HrpA; Provisional.
Probab=95.42  E-value=0.041  Score=32.87  Aligned_cols=36  Identities=19%  Similarity=0.262  Sum_probs=23.5

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCC---CEEEEECC
Q ss_conf             8868998678887979999999999997798---19998778
Q gi|254780218|r    3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREP   41 (225)
Q Consensus         3 ~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~---~v~~~~eP   41 (225)
T Consensus        88 ~nqVvii~GeTGsGKTTQiPq~~---le~g~g~~~~I~~TQP  126 (1295)
T PRK11131         88 DHQVVIVAGETGSGKTTQLPKIC---LELGRGIKGLIGHTQP  126 (1295)
T ss_pred             HCCEEEEECCCCCCHHHHHHHHH---HHCCCCCCCEEEECCC
T ss_conf             79969997689998788999999---9627999998997796