HHsearch alignment for GI: 254780218 and conserved domain: PRK12269
>PRK12269 bifunctional cytidylate kinase/ribosomal protein S1; Provisional.
Probab=98.13 E-value=8.9e-05 Score=48.77 Aligned_cols=30 Identities=27% Similarity=0.412 Sum_probs=25.5
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 689986788879799999999999977981999
Q gi|254780218|r 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 (225)
Q Consensus 5 ~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~ 37 (225)
T Consensus 35 iIIAIDGPAGSGKSTVAk~lA~~L---G~~yLD 64 (863)
T PRK12269 35 VIIALDGPAGSGKSSVCRLLASRL---GAQCLN 64 (863)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH---CCEEEC
T ss_conf 899986898678899999999982---995887