HHsearch alignment for GI: 254780218 and conserved domain: PRK13948

>PRK13948 shikimate kinase; Provisional.
Probab=98.96  E-value=1.8e-08  Score=70.86  Aligned_cols=171  Identities=16%  Similarity=0.201  Sum_probs=87.5

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86899867888797999999999999779819998778898441001100124445410134567778899999776356
Q gi|254780218|r    4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVI   83 (225)
Q Consensus         4 g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I   83 (225)
T Consensus        10 ~~~IvLIG~mGsGKStiGk~LA~~l---~~~fiD~D~~Ie~~~g~sI~eIF~~--------~GE~~-F---R-~~E~~~l   73 (182)
T PRK13948         10 ATFVALAGFMGTGKSRIGWELSRAL---ALHFVDTDKLITRVVGKSIPEVFAQ--------EGEEY-F---R-ACEKEVV   73 (182)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHH---CCCEEECHHHHHHHHCCCHHHHHHH--------HCHHH-H---H-HHHHHHH
T ss_conf             9818988999998899999999996---9598888499999889399999998--------48999-9---9-9999999


Q ss_pred             HHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             55423452587235424310001003444245776544420388984115665203487764432111110000000021
Q gi|254780218|r   84 RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE  163 (225)
Q Consensus        84 ~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E  163 (225)
T Consensus        74 ~~l~~~~~~VISt----------GGG~v~~~~n~~~l~~-------~g~vv~L~~~~~~i~~R~~~~~RPl-l~~~~~~~  135 (182)
T PRK13948         74 RRVTRLDYAVISL----------GGGTFIHEENRRALLG-------RGPVVVLWASPETVYQRTKHSDRPL-LQVEDPLE  135 (182)
T ss_pred             HHHHCCCCEEEEC----------CCCEECCHHHHHHHHH-------CCEEEEEECCHHHHHHHCCCCCCCC-CCCCCHHH
T ss_conf             9997479969975----------8850058999999996-------8989999699999998817899998-88998799


Q ss_pred             HCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             1288999999999999999789949998189788999999999999999864
Q gi|254780218|r  164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR  215 (225)
Q Consensus       164 ~~~~~~~~kv~~~y~~la~~~~~~~~~IDa~~~~eei~~~I~~~i~~~l~k~  215 (225)
T Consensus       136 ~l~~-l~~eR~~~Y~~-A----~-~~I~td~~~~~eiv~~Ii~~L~a~~~~~  180 (182)
T PRK13948        136 RIRT-LMEEREPVYRQ-G----T-IHVHSDGRPVEEIVEEVVERLWAWAEAQ  180 (182)
T ss_pred             HHHH-HHHHHHHHHHH-C----C-EEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             9999-99999999996-7----8-8988998999999999999999998665