HHsearch alignment for GI: 254780218 and conserved domain: PRK13974
>PRK13974 thymidylate kinase; Provisional.
Probab=100.00 E-value=0 Score=401.35 Aligned_cols=204 Identities=31% Similarity=0.517 Sum_probs=187.7
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC-----CEEEEECCCCCCCCCHHHHCCCCCC-CCCCHHHHHHHHHHHHH
Q ss_conf 88868998678887979999999999997798-----1999877889844100110012444-54101345677788999
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG-VDEFGAEAEAIVFAAAR 75 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~-----~v~~~~eP~~t~~ge~ir~~l~~~~-~~~~~~~~~~lLfaadr 75 (225)
T Consensus 1 m~G~fIv~EGiDGsGKsTq~~~L~~~L~~~g~~~~~~~~~~~rePg~t~~g~~ir~~l~~~~~~~~~~~~~e~lLf~AdR 80 (212)
T PRK13974 1 MKGKFIVLEGIDGCGKTTQIDHLSKWLPSSGLMPKGAKLIITREPGGTLLGKSLRELLLDTSKDNSPSPLAELLLYAADR 80 (212)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99419998899999899999999999986587535861577149999806999999980665456888799999999999
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHH
Q ss_conf 99776356554234525872354243100010034442457765444203889841156652034877644321111100
Q gi|254780218|r 76 LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 (225)
Q Consensus 76 ~~~~~~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~ 155 (225)
T Consensus 81 ~e~~~~~I~paL~~G~iVI~DRY~~St~AYQg~~~g~~~~~i~~l~~~~~~~~~PDlt~~LDv~~e~a~~R~~~~~---- 156 (212)
T PRK13974 81 AQHVSKIIRPALENGDWVISDRFSGSTLAYQGYGRGLDLELIKNLESIATQGLSPDLTFFLEISVEESIRRRKNRK---- 156 (212)
T ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCC----
T ss_conf 9999999999983799999788323599998862699999999999987479999989997697588999884776----
Q ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 00000021128899999999999999978994999818978899999999999999986
Q gi|254780218|r 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 (225)
Q Consensus 156 ~~~~d~~E~~~~~~~~kv~~~y~~la~~~~~~~~~IDa~~~~eei~~~I~~~i~~~l~k 214 (225)
T Consensus 157 ---~dr~e~e~~~f~~kVr~~y~~la~~--~~~~~IDa~~~ieeV~~~I~~~i~~~~~~ 210 (212)
T PRK13974 157 ---PDRIEAEGIEFLERVAEGFALIAEE--RNWKVISADQSIETISNEIKETLLNNFSN 210 (212)
T ss_pred ---CCCHHCCCHHHHHHHHHHHHHHHCC--CCEEEEECCCCHHHHHHHHHHHHHHHHHC
T ss_conf ---3431016199999999999998473--98799989999999999999999999734