HHsearch alignment for GI: 254780218 and conserved domain: PRK13974

>PRK13974 thymidylate kinase; Provisional.
Probab=100.00  E-value=0  Score=401.35  Aligned_cols=204  Identities=31%  Similarity=0.517  Sum_probs=187.7

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC-----CEEEEECCCCCCCCCHHHHCCCCCC-CCCCHHHHHHHHHHHHH
Q ss_conf             88868998678887979999999999997798-----1999877889844100110012444-54101345677788999
Q gi|254780218|r    2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG-VDEFGAEAEAIVFAAAR   75 (225)
Q Consensus         2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~-----~v~~~~eP~~t~~ge~ir~~l~~~~-~~~~~~~~~~lLfaadr   75 (225)
T Consensus         1 m~G~fIv~EGiDGsGKsTq~~~L~~~L~~~g~~~~~~~~~~~rePg~t~~g~~ir~~l~~~~~~~~~~~~~e~lLf~AdR   80 (212)
T PRK13974          1 MKGKFIVLEGIDGCGKTTQIDHLSKWLPSSGLMPKGAKLIITREPGGTLLGKSLRELLLDTSKDNSPSPLAELLLYAADR   80 (212)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf             99419998899999899999999999986587535861577149999806999999980665456888799999999999


Q ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHH
Q ss_conf             99776356554234525872354243100010034442457765444203889841156652034877644321111100
Q gi|254780218|r   76 LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE  155 (225)
Q Consensus        76 ~~~~~~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~  155 (225)
T Consensus        81 ~e~~~~~I~paL~~G~iVI~DRY~~St~AYQg~~~g~~~~~i~~l~~~~~~~~~PDlt~~LDv~~e~a~~R~~~~~----  156 (212)
T PRK13974         81 AQHVSKIIRPALENGDWVISDRFSGSTLAYQGYGRGLDLELIKNLESIATQGLSPDLTFFLEISVEESIRRRKNRK----  156 (212)
T ss_pred             HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCC----
T ss_conf             9999999999983799999788323599998862699999999999987479999989997697588999884776----


Q ss_pred             CCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             00000021128899999999999999978994999818978899999999999999986
Q gi|254780218|r  156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK  214 (225)
Q Consensus       156 ~~~~d~~E~~~~~~~~kv~~~y~~la~~~~~~~~~IDa~~~~eei~~~I~~~i~~~l~k  214 (225)
T Consensus       157 ---~dr~e~e~~~f~~kVr~~y~~la~~--~~~~~IDa~~~ieeV~~~I~~~i~~~~~~  210 (212)
T PRK13974        157 ---PDRIEAEGIEFLERVAEGFALIAEE--RNWKVISADQSIETISNEIKETLLNNFSN  210 (212)
T ss_pred             ---CCCHHCCCHHHHHHHHHHHHHHHCC--CCEEEEECCCCHHHHHHHHHHHHHHHHHC
T ss_conf             ---3431016199999999999998473--98799989999999999999999999734