HHsearch alignment for GI: 254780218 and conserved domain: PRK13976
>PRK13976 thymidylate kinase; Provisional.
Probab=100.00 E-value=0 Score=386.07 Aligned_cols=193 Identities=38% Similarity=0.669 Sum_probs=175.7
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH--CCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68998678887979999999999997--7981999877889844100110012444541013456777889999977635
Q gi|254780218|r 5 LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENV 82 (225)
Q Consensus 5 ~~I~iEGiDGsGKsTq~~~L~~~L~~--~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~ 82 (225)
T Consensus 1 mfIvfEGiDGsGKsTq~~~L~~~L~~~~~~~~~~~trEPggt~~ge~IR~~ll~~--~~~~~~te~lLf~A~R~eh~~~~ 78 (202)
T PRK13976 1 MFITFEGIDGSGKTTQSRLLAEYLSQIYGENNVVLTREPGGTSFNESVRGLLLST--KNLDKLSELLLFIAMRREHFVKV 78 (202)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9899989999989999999999998606998689837999982789999997165--57996999999999999999999
Q ss_pred HHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 65542345258723542431000100344424577654442038898411566520348776443211111000000002
Q gi|254780218|r 83 IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 (225)
Q Consensus 83 I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~ 162 (225)
T Consensus 79 I~PaL~~g~~VI~DRy~~St~AYQg~~~gl~~~~i~~l~~~~-~~~~PDlt~~Ldi~~e~al~R~~----------~~~~ 147 (202)
T PRK13976 79 ILPALTQGKIVICDRFIDSTIAYQGYGCGIDLKLIRDLNDLV-VDIYPDITFILDIDINQSLSRAD----------KNGY 147 (202)
T ss_pred HHHHHHCCCEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHH-CCCCCCEEEEEECCHHHHHHCCC----------CCCH
T ss_conf 888886699899748535578873226798999999999984-07898879998378899975214----------6862
Q ss_pred HHCCHHHHHHHHHHHHHHHHHCCCCEEEE---CCCCCHHHHHHHHHHHHHH
Q ss_conf 11288999999999999999789949998---1897889999999999999
Q gi|254780218|r 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIV---DSAHSFQSVATNILNIVWE 210 (225)
Q Consensus 163 E~~~~~~~~kv~~~y~~la~~~~~~~~~I---Da~~~~eei~~~I~~~i~~ 210 (225)
T Consensus 148 e~~~~~f~~kVr~~Yl~la~~~~~r~~~I~~ida~~~i~~I~~~~~~ii~~ 198 (202)
T PRK13976 148 EFMDLEFYARVRKGFQDIAKKNPHRCHLITCIDATDNINDINSVHLKIIKV 198 (202)
T ss_pred HHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 120599999999999999985998789997035767989999999999999