HHsearch alignment for GI: 254780218 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=95.76 E-value=0.0078 Score=37.17 Aligned_cols=29 Identities=31% Similarity=0.458 Sum_probs=25.3
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 98886899867888797999999999999
Q gi|254780218|r 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 (225)
Q Consensus 1 M~~g~~I~iEGiDGsGKsTq~~~L~~~L~ 29 (225)
T Consensus 488 i~~Ge~vaIvG~sGsGKSTL~kll~Gl~~ 516 (694)
T TIGR03375 488 IRPGEKVAIIGRIGSGKSTLLKLLLGLYQ 516 (694)
T ss_pred ECCCCEEEEEECCCCCHHHHHHHHCCCCC
T ss_conf 87997899980589878899998556758