HHsearch alignment for GI: 254780218 and conserved domain: TIGR03415
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=95.42 E-value=0.016 Score=35.29 Aligned_cols=27 Identities=19% Similarity=0.421 Sum_probs=24.0
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 888689986788879799999999999
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFL 28 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L 28 (225)
T Consensus 48 ~~GEi~~lvGpSGsGKSTLLr~i~GL~ 74 (382)
T TIGR03415 48 EEGEICVLMGLSGSGKSSLLRAVNGLN 74 (382)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 799899999999734999999997599